RNA–Protein interactions for RNA: ENST00000482904.1

RHBDF1-208, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-208ENST00000482904 PP632Q6XCG6 107 aa8.47□□□□□ -1.05
RHBDF1-208ENST00000482904 DSTQ03001 7570 aaKnown RBP8.46□□□□□ -1.05
RHBDF1-208ENST00000482904 RPS28P62857 69 aaKnown RBP8.45□□□□□ -1.06
RHBDF1-208ENST00000482904 MT1LQ93083 61 aa8.38□□□□□ -1.07
RHBDF1-208ENST00000482904 MT1MQ8N339 61 aa8.34□□□□□ -1.07
RHBDF1-208ENST00000482904 A6NED7 52 aa8.32□□□□□ -1.08
RHBDF1-208ENST00000482904 KRTAP4-9Q9BYQ8 210 aa8.28□□□□□ -1.08
RHBDF1-208ENST00000482904 K7ERS5 55 aa8.24□□□□□ -1.09
RHBDF1-208ENST00000482904 KRTAP12-3P60328 96 aa8.14□□□□□ -1.11
RHBDF1-208ENST00000482904 KRTAP4-3Q9BYR4 195 aa8.14□□□□□ -1.11
RHBDF1-208ENST00000482904 LCE1DQ5T752 114 aa8.09□□□□□ -1.11
RHBDF1-208ENST00000482904 LCE4AQ5TA78 99 aa8.09□□□□□ -1.11
RHBDF1-208ENST00000482904 KRTAP25-1Q3LHN0 102 aa8.05□□□□□ -1.12
RHBDF1-208ENST00000482904 MT4P47944 62 aa8.04□□□□□ -1.12
RHBDF1-208ENST00000482904 GPR98Q8WXG9 6306 aa8.01□□□□□ -1.13
RHBDF1-208ENST00000482904 CDC42SE1Q9NRR8 79 aa7.98□□□□□ -1.13
RHBDF1-208ENST00000482904 KRTAP4-7Q9BYR0 210 aa7.96□□□□□ -1.14
RHBDF1-208ENST00000482904 HMCN1Q96RW7 5635 aa7.92□□□□□ -1.14
RHBDF1-208ENST00000482904 KRTAP5-4Q6L8H1 288 aa7.9□□□□□ -1.14
RHBDF1-208ENST00000482904 ROMO1P60602 79 aa7.78□□□□□ -1.16
RHBDF1-208ENST00000482904 KRTAP4-6Q9BYQ5 205 aa7.75□□□□□ -1.17
RHBDF1-208ENST00000482904 KRTAP23-1A1A580 65 aa7.69□□□□□ -1.18
RHBDF1-208ENST00000482904 KRTAP19-4Q3LI73 84 aa7.62□□□□□ -1.19
RHBDF1-208ENST00000482904 KRTAP5-5Q701N2 237 aaPredicted RBP7.61□□□□□ -1.19
RHBDF1-208ENST00000482904 AHNAK2Q8IVF2 5795 aa7.61□□□□□ -1.19
RHBDF1-208ENST00000482904 KRTAP15-1Q3LI76 137 aa7.6□□□□□ -1.19
RHBDF1-208ENST00000482904 BRK1Q8WUW1 75 aa7.59□□□□□ -1.19
RHBDF1-208ENST00000482904 LOC100996750A0A140TA64 210 aa7.55□□□□□ -1.2
RHBDF1-208ENST00000482904 KRTAP20-2Q3LI61 65 aa7.5□□□□□ -1.21
RHBDF1-208ENST00000482904 LCE3CQ5T5A8 94 aa7.48□□□□□ -1.21
RHBDF1-208ENST00000482904 KRTAP12-4P60329 112 aa7.47□□□□□ -1.21
RHBDF1-208ENST00000482904 KRTAP5-10Q6L8G5 202 aa7.47□□□□□ -1.21
RHBDF1-208ENST00000482904 SPRR5A0A1B0GTR4 108 aa7.45□□□□□ -1.22
RHBDF1-208ENST00000482904 KRTAP5-3Q6L8H2 238 aa7.33□□□□□ -1.24
RHBDF1-208ENST00000482904 SYNE1Q8NF91 8797 aaKnown RBP7.25□□□□□ -1.25
RHBDF1-208ENST00000482904 KRTAP5-7Q6L8G8 165 aa7.18□□□□□ -1.26
RHBDF1-208ENST00000482904 MT1AP04731 61 aa7.14□□□□□ -1.27
RHBDF1-208ENST00000482904 PMAIP1Q13794 54 aa7.12□□□□□ -1.27
RHBDF1-208ENST00000482904 KRTAP6-1Q3LI64 71 aa7.08□□□□□ -1.28
RHBDF1-208ENST00000482904 KRTAP9-6A8MVA2 160 aa7.01□□□□□ -1.29
RHBDF1-208ENST00000482904 KRTAP5-2Q701N4 177 aa6.93□□□□□ -1.3
RHBDF1-208ENST00000482904 PRO0628Q9UI54 55 aa6.89□□□□□ -1.31
RHBDF1-208ENST00000482904 KRTAP9-4Q9BYQ2 154 aa6.86□□□□□ -1.31
RHBDF1-208ENST00000482904 PRAC1Q96KF2 57 aa6.85□□□□□ -1.31
RHBDF1-208ENST00000482904 KRTAP4-11Q9BYQ6 195 aa6.83□□□□□ -1.32
RHBDF1-208ENST00000482904 KRTAP6-2Q3LI66 62 aa6.78□□□□□ -1.32
RHBDF1-208ENST00000482904 KRTAP5-8O75690 187 aa6.58□□□□□ -1.36
RHBDF1-208ENST00000482904 MT3P25713 68 aa6.53□□□□□ -1.36
RHBDF1-208ENST00000482904 KTN1-AS1Q86SY8 53 aa6.52□□□□□ -1.37
RHBDF1-208ENST00000482904 OBSCNQ5VST9 7968 aa6.43□□□□□ -1.38
RHBDF1-208ENST00000482904 SVIPQ8NHG7 77 aa6.29□□□□□ -1.4
RHBDF1-208ENST00000482904 KRTAP9-9Q9BYP9 154 aa6.29□□□□□ -1.4
RHBDF1-208ENST00000482904 MUC5ACP98088 5654 aa6.28□□□□□ -1.4
RHBDF1-208ENST00000482904 AHNAKQ09666 5890 aaKnown RBP6.27□□□□□ -1.41
RHBDF1-208ENST00000482904 MUC5BQ9HC84 5762 aaPredicted RBP6.26□□□□□ -1.41
RHBDF1-208ENST00000482904 KRTAP5-1Q6L8H4 278 aa6.2□□□□□ -1.42
RHBDF1-208ENST00000482904 LCE1EQ5T753 118 aa5.96□□□□□ -1.46
RHBDF1-208ENST00000482904 LCE1BQ5T7P3 118 aa5.68□□□□□ -1.5
RHBDF1-208ENST00000482904 LUZP6Q538Z0 58 aa5.64□□□□□ -1.51
RHBDF1-208ENST00000482904 KRTAP4-2Q9BYR5 136 aa5.62□□□□□ -1.51
RHBDF1-208ENST00000482904 LCE1CQ5T751 118 aa5.53□□□□□ -1.52
RHBDF1-208ENST00000482904 LCE3DQ9BYE3 92 aa5.41□□□□□ -1.54
RHBDF1-208ENST00000482904 KRTAP4-12Q9BQ66 201 aa5.13□□□□□ -1.59
RHBDF1-208ENST00000482904 LCE3EQ5T5B0 92 aa5.09□□□□□ -1.59
RHBDF1-208ENST00000482904 KRTAP5-11Q6L8G4 156 aa5.02□□□□□ -1.61
RHBDF1-208ENST00000482904 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.01□□□□□ -1.61
RHBDF1-208ENST00000482904 NDUFAF8A1L188 74 aa4.94□□□□□ -1.62
RHBDF1-208ENST00000482904 LCE1FQ5T754 118 aa4.87□□□□□ -1.63
RHBDF1-208ENST00000482904 KRTAP21-2Q3LI59 83 aa4.63□□□□□ -1.67
RHBDF1-208ENST00000482904 PHGR1C9JFL3 82 aa4.4□□□□□ -1.71
RHBDF1-208ENST00000482904 KRTAP4-4Q9BYR3 166 aa4.29□□□□□ -1.72
RHBDF1-208ENST00000482904 PRM1P04553 51 aa4.04□□□□□ -1.76
RHBDF1-208ENST00000482904 A0A0A0MQY5 61 aa4.03□□□□□ -1.76
RHBDF1-208ENST00000482904 MUC19Q7Z5P9 8384 aa3.95□□□□□ -1.78
RHBDF1-208ENST00000482904 INE1O15225 51 aa3.94□□□□□ -1.78
RHBDF1-208ENST00000482904 KRTAP21-1Q3LI58 79 aa3.33□□□□□ -1.88
RHBDF1-208ENST00000482904 MUC16Q8WXI7 14507 aa2.8□□□□□ -1.96
RHBDF1-208ENST00000482904 H3BS24 57 aa2.78□□□□□ -1.96
Retrieved 78 of 20,778 RNA–protein pairs in 93.2 ms