RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 KMT2DO14686 5537 aa3.81□□□□□ -1.8
RPGR-208ENST00000482855 KRTAP4-8A0A0G2JLE6 195 aa3.81□□□□□ -1.8
RPGR-208ENST00000482855 KRTAP4-8Q9BYQ9 185 aa3.81□□□□□ -1.8
RPGR-208ENST00000482855 KRTAP4-7Q9BYR0 210 aa3.8□□□□□ -1.8
RPGR-208ENST00000482855 KRTAP5-9P26371 169 aa3.79□□□□□ -1.8
RPGR-208ENST00000482855 KRTAP19-7Q3SYF9 63 aa3.75□□□□□ -1.81
RPGR-208ENST00000482855 FSIP2Q5CZC0 6907 aa3.75□□□□□ -1.81
RPGR-208ENST00000482855 KRTAP19-4Q3LI73 84 aa3.74□□□□□ -1.81
RPGR-208ENST00000482855 LOC100996750A0A140TA64 210 aa3.73□□□□□ -1.81
RPGR-208ENST00000482855 KRTAP4-6Q9BYQ5 205 aa3.73□□□□□ -1.81
RPGR-208ENST00000482855 MT1LQ93083 61 aa3.67□□□□□ -1.82
RPGR-208ENST00000482855 MACF1Q9UPN3 7388 aaKnown RBP3.66□□□□□ -1.82
RPGR-208ENST00000482855 MT1EP04732 61 aa3.62□□□□□ -1.83
RPGR-208ENST00000482855 NEBP20929 6669 aa3.59□□□□□ -1.83
RPGR-208ENST00000482855 KRTAP12-4P60329 112 aa3.57□□□□□ -1.84
RPGR-208ENST00000482855 LCE1AQ5T7P2 110 aa3.54□□□□□ -1.84
RPGR-208ENST00000482855 SYNE2Q8WXH0 6885 aaKnown RBP3.51□□□□□ -1.85
RPGR-208ENST00000482855 MT1GP13640 62 aa3.48□□□□□ -1.85
RPGR-208ENST00000482855 KRTAP20-1Q3LI63 56 aa3.48□□□□□ -1.85
RPGR-208ENST00000482855 KRTAP4-3Q9BYR4 195 aa3.47□□□□□ -1.85
RPGR-208ENST00000482855 SPRR2FQ96RM1 72 aa3.44□□□□□ -1.86
RPGR-208ENST00000482855 SPRR2EP22531 72 aa3.42□□□□□ -1.86
RPGR-208ENST00000482855 SPRR2BP35325 72 aa3.42□□□□□ -1.86
RPGR-208ENST00000482855 SPRR2AP35326 72 aa3.42□□□□□ -1.86
RPGR-208ENST00000482855 MT1MQ8N339 61 aa3.37□□□□□ -1.87
RPGR-208ENST00000482855 KRTAP2-2Q9BYT5 123 aa3.36□□□□□ -1.87
RPGR-208ENST00000482855 MUC12Q9UKN1 5478 aa3.33□□□□□ -1.88
RPGR-208ENST00000482855 SPRR2DP22532 72 aa3.32□□□□□ -1.88
RPGR-208ENST00000482855 KRTAP19-3Q7Z4W3 81 aa3.32□□□□□ -1.88
RPGR-208ENST00000482855 LCE5AQ5TCM9 118 aa3.32□□□□□ -1.88
RPGR-208ENST00000482855 LCE3BQ5TA77 95 aa3.31□□□□□ -1.88
RPGR-208ENST00000482855 MDN1Q9NU22 5596 aa3.28□□□□□ -1.88
RPGR-208ENST00000482855 KRTAP4-9Q9BYQ8 210 aa3.28□□□□□ -1.88
RPGR-208ENST00000482855 MT1AP04731 61 aa3.25□□□□□ -1.89
RPGR-208ENST00000482855 SYNE1Q8NF91 8797 aaKnown RBP3.22□□□□□ -1.89
RPGR-208ENST00000482855 PRM1P04553 51 aa3.21□□□□□ -1.9
RPGR-208ENST00000482855 LCE3DQ9BYE3 92 aa3.21□□□□□ -1.9
RPGR-208ENST00000482855 LCE3EQ5T5B0 92 aa3.2□□□□□ -1.9
RPGR-208ENST00000482855 KRTAP5-5Q701N2 237 aaPredicted RBP3.17□□□□□ -1.9
RPGR-208ENST00000482855 DSTQ03001 7570 aaKnown RBP3.16□□□□□ -1.9
RPGR-208ENST00000482855 KRTAP6-1Q3LI64 71 aa3.13□□□□□ -1.91
RPGR-208ENST00000482855 LCE4AQ5TA78 99 aa3.13□□□□□ -1.91
RPGR-208ENST00000482855 KRTAP5-4Q6L8H1 288 aa3.09□□□□□ -1.91
RPGR-208ENST00000482855 KRTAP6-2Q3LI66 62 aa3.01□□□□□ -1.93
RPGR-208ENST00000482855 LCE1DQ5T752 114 aa2.91□□□□□ -1.94
RPGR-208ENST00000482855 KRTAP5-3Q6L8H2 238 aa2.9□□□□□ -1.94
RPGR-208ENST00000482855 GPR98Q8WXG9 6306 aa2.86□□□□□ -1.95
RPGR-208ENST00000482855 KRTAP9-4Q9BYQ2 154 aa2.86□□□□□ -1.95
RPGR-208ENST00000482855 KRTAP20-2Q3LI61 65 aa2.79□□□□□ -1.96
RPGR-208ENST00000482855 KRTAP5-10Q6L8G5 202 aa2.78□□□□□ -1.97
RPGR-208ENST00000482855 HMCN1Q96RW7 5635 aa2.77□□□□□ -1.97
RPGR-208ENST00000482855 MT4P47944 62 aa2.76□□□□□ -1.97
RPGR-208ENST00000482855 MT3P25713 68 aa2.75□□□□□ -1.97
RPGR-208ENST00000482855 KRTAP4-12Q9BQ66 201 aa2.75□□□□□ -1.97
RPGR-208ENST00000482855 KRTAP9-9Q9BYP9 154 aa2.74□□□□□ -1.97
RPGR-208ENST00000482855 AHNAK2Q8IVF2 5795 aa2.74□□□□□ -1.97
RPGR-208ENST00000482855 KRTAP5-2Q701N4 177 aa2.74□□□□□ -1.97
RPGR-208ENST00000482855 KRTAP5-7Q6L8G8 165 aa2.74□□□□□ -1.97
RPGR-208ENST00000482855 KRTAP4-2Q9BYR5 136 aa2.74□□□□□ -1.97
RPGR-208ENST00000482855 OBSCNQ5VST9 7968 aa2.72□□□□□ -1.97
RPGR-208ENST00000482855 LCE1EQ5T753 118 aa2.6□□□□□ -1.99
RPGR-208ENST00000482855 KRTAP4-11Q9BYQ6 195 aa2.55□□□□□ -2
RPGR-208ENST00000482855 KRTAP5-8O75690 187 aa2.46□□□□□ -2.01
RPGR-208ENST00000482855 MUC5BQ9HC84 5762 aaPredicted RBP2.44□□□□□ -2.02
RPGR-208ENST00000482855 AHNAKQ09666 5890 aaKnown RBP2.37□□□□□ -2.03
RPGR-208ENST00000482855 KRTAP5-1Q6L8H4 278 aa2.36□□□□□ -2.03
RPGR-208ENST00000482855 MUC5ACP98088 5654 aa2.36□□□□□ -2.03
RPGR-208ENST00000482855 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.23□□□□□ -2.05
RPGR-208ENST00000482855 LCE1CQ5T751 118 aa2.2□□□□□ -2.06
RPGR-208ENST00000482855 LCE1BQ5T7P3 118 aa2.2□□□□□ -2.06
RPGR-208ENST00000482855 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
RPGR-208ENST00000482855 LCE1FQ5T754 118 aa2.01□□□□□ -2.09
RPGR-208ENST00000482855 KRTAP5-11Q6L8G4 156 aa2□□□□□ -2.09
RPGR-208ENST00000482855 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
RPGR-208ENST00000482855 MUC19Q7Z5P9 8384 aa1.89□□□□□ -2.11
RPGR-208ENST00000482855 KRTAP4-4Q9BYR3 166 aa1.85□□□□□ -2.11
RPGR-208ENST00000482855 PHGR1C9JFL3 82 aa1.68□□□□□ -2.14
RPGR-208ENST00000482855 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 62.7 ms