RNA–Protein interactions for RNA: ENST00000482623.5

FAM3D-202, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-202ENST00000482623 KRTAP4-3Q9BYR4 195 aa4.11□□□□□ -1.75
FAM3D-202ENST00000482623 KRTAP5-10Q6L8G5 202 aa4.1□□□□□ -1.75
FAM3D-202ENST00000482623 AHNAK2Q8IVF2 5795 aa4.1□□□□□ -1.75
FAM3D-202ENST00000482623 KRTAP12-3P60328 96 aa4.09□□□□□ -1.75
FAM3D-202ENST00000482623 KRTAP4-6Q9BYQ5 205 aa4.09□□□□□ -1.75
FAM3D-202ENST00000482623 ATP5EP56381 51 aaPredicted RBP4.08□□□□□ -1.76
FAM3D-202ENST00000482623 KRTAP19-4Q3LI73 84 aa4.07□□□□□ -1.76
FAM3D-202ENST00000482623 ANAPC13Q9BS18 74 aa4.05□□□□□ -1.76
FAM3D-202ENST00000482623 LINC01558Q9Y6Z2 57 aa4.05□□□□□ -1.76
FAM3D-202ENST00000482623 SPRR5A0A1B0GTR4 108 aa4.01□□□□□ -1.77
FAM3D-202ENST00000482623 UQCR11O14957 56 aa4□□□□□ -1.77
FAM3D-202ENST00000482623 KRTAP5-7Q6L8G8 165 aa3.99□□□□□ -1.77
FAM3D-202ENST00000482623 KRTAP5-5Q701N2 237 aaPredicted RBP3.99□□□□□ -1.77
FAM3D-202ENST00000482623 KRTAP4-7Q9BYR0 210 aa3.98□□□□□ -1.77
FAM3D-202ENST00000482623 KRTAP25-1Q3LHN0 102 aa3.97□□□□□ -1.77
FAM3D-202ENST00000482623 KRTAP5-3Q6L8H2 238 aa3.97□□□□□ -1.77
FAM3D-202ENST00000482623 KRTAP12-4P60329 112 aa3.96□□□□□ -1.78
FAM3D-202ENST00000482623 KRTAP20-2Q3LI61 65 aa3.96□□□□□ -1.78
FAM3D-202ENST00000482623 CCDC179H3BU77 68 aa3.94□□□□□ -1.78
FAM3D-202ENST00000482623 KRTAP23-1A1A580 65 aa3.91□□□□□ -1.78
FAM3D-202ENST00000482623 K7ERS5 55 aa3.87□□□□□ -1.79
FAM3D-202ENST00000482623 TMEM258P61165 79 aa3.87□□□□□ -1.79
FAM3D-202ENST00000482623 MIR22HGQ0VDD5 57 aa3.85□□□□□ -1.79
FAM3D-202ENST00000482623 KRTAP15-1Q3LI76 137 aa3.79□□□□□ -1.8
FAM3D-202ENST00000482623 LOC100996750A0A140TA64 210 aa3.78□□□□□ -1.8
FAM3D-202ENST00000482623 SYNE1Q8NF91 8797 aaKnown RBP3.77□□□□□ -1.81
FAM3D-202ENST00000482623 PCP4P48539 62 aa3.77□□□□□ -1.81
FAM3D-202ENST00000482623 V9GYY9 64 aa3.77□□□□□ -1.81
FAM3D-202ENST00000482623 LCE3CQ5T5A8 94 aa3.76□□□□□ -1.81
FAM3D-202ENST00000482623 Q1T7F1 81 aa3.69□□□□□ -1.82
FAM3D-202ENST00000482623 KRTAP5-2Q701N4 177 aa3.68□□□□□ -1.82
FAM3D-202ENST00000482623 KRTAP4-11Q9BYQ6 195 aa3.68□□□□□ -1.82
FAM3D-202ENST00000482623 MT1AP04731 61 aa3.66□□□□□ -1.82
FAM3D-202ENST00000482623 PSPHP1O15172 72 aa3.63□□□□□ -1.83
FAM3D-202ENST00000482623 CDC42SE1Q9NRR8 79 aa3.61□□□□□ -1.83
FAM3D-202ENST00000482623 KRTAP6-1Q3LI64 71 aa3.6□□□□□ -1.83
FAM3D-202ENST00000482623 RPS28P62857 69 aaKnown RBP3.58□□□□□ -1.84
FAM3D-202ENST00000482623 KRTAP9-4Q9BYQ2 154 aa3.58□□□□□ -1.84
FAM3D-202ENST00000482623 A6NED7 52 aa3.54□□□□□ -1.84
FAM3D-202ENST00000482623 KRTAP5-8O75690 187 aa3.54□□□□□ -1.84
FAM3D-202ENST00000482623 ROMO1P60602 79 aa3.54□□□□□ -1.84
FAM3D-202ENST00000482623 KRTAP9-6A8MVA2 160 aa3.48□□□□□ -1.85
FAM3D-202ENST00000482623 KRTAP6-2Q3LI66 62 aa3.48□□□□□ -1.85
FAM3D-202ENST00000482623 MUC5BQ9HC84 5762 aaPredicted RBP3.45□□□□□ -1.86
FAM3D-202ENST00000482623 MUC5ACP98088 5654 aa3.44□□□□□ -1.86
FAM3D-202ENST00000482623 AHNAKQ09666 5890 aaKnown RBP3.43□□□□□ -1.86
FAM3D-202ENST00000482623 KRTAP9-9Q9BYP9 154 aa3.41□□□□□ -1.86
FAM3D-202ENST00000482623 MT3P25713 68 aa3.4□□□□□ -1.87
FAM3D-202ENST00000482623 SVIPQ8NHG7 77 aa3.36□□□□□ -1.87
FAM3D-202ENST00000482623 OBSCNQ5VST9 7968 aa3.35□□□□□ -1.87
FAM3D-202ENST00000482623 KRTAP5-1Q6L8H4 278 aa3.31□□□□□ -1.88
FAM3D-202ENST00000482623 LCE1EQ5T753 118 aa3.21□□□□□ -1.9
FAM3D-202ENST00000482623 H3BS24 57 aa3.11□□□□□ -1.91
FAM3D-202ENST00000482623 PRO0628Q9UI54 55 aa3.09□□□□□ -1.91
FAM3D-202ENST00000482623 BRK1Q8WUW1 75 aa3.04□□□□□ -1.92
FAM3D-202ENST00000482623 LCE1CQ5T751 118 aa2.96□□□□□ -1.94
FAM3D-202ENST00000482623 LCE1BQ5T7P3 118 aa2.96□□□□□ -1.94
FAM3D-202ENST00000482623 KRTAP4-2Q9BYR5 136 aa2.94□□□□□ -1.94
FAM3D-202ENST00000482623 PMAIP1Q13794 54 aa2.9□□□□□ -1.95
FAM3D-202ENST00000482623 KTN1-AS1Q86SY8 53 aa2.83□□□□□ -1.96
FAM3D-202ENST00000482623 PRAC1Q96KF2 57 aa2.74□□□□□ -1.97
FAM3D-202ENST00000482623 KRTAP4-12Q9BQ66 201 aa2.7□□□□□ -1.98
FAM3D-202ENST00000482623 LCE1FQ5T754 118 aa2.69□□□□□ -1.98
FAM3D-202ENST00000482623 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.69□□□□□ -1.98
FAM3D-202ENST00000482623 LCE3DQ9BYE3 92 aa2.69□□□□□ -1.98
FAM3D-202ENST00000482623 KRTAP5-11Q6L8G4 156 aa2.66□□□□□ -1.98
FAM3D-202ENST00000482623 LCE3EQ5T5B0 92 aa2.51□□□□□ -2.01
FAM3D-202ENST00000482623 KRTAP21-2Q3LI59 83 aa2.41□□□□□ -2.02
FAM3D-202ENST00000482623 PHGR1C9JFL3 82 aa2.37□□□□□ -2.03
FAM3D-202ENST00000482623 LUZP6Q538Z0 58 aa2.31□□□□□ -2.04
FAM3D-202ENST00000482623 A0A0A0MQY5 61 aa2.27□□□□□ -2.05
FAM3D-202ENST00000482623 NDUFAF8A1L188 74 aa2.2□□□□□ -2.06
FAM3D-202ENST00000482623 KRTAP4-4Q9BYR3 166 aa2.12□□□□□ -2.07
FAM3D-202ENST00000482623 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
FAM3D-202ENST00000482623 INE1O15225 51 aa1.94□□□□□ -2.1
FAM3D-202ENST00000482623 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
FAM3D-202ENST00000482623 PRM1P04553 51 aa1.74□□□□□ -2.13
FAM3D-202ENST00000482623 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 61.6 ms