RNA–Protein interactions for RNA: ENST00000482318.5

RUNX1-216, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-216ENST00000482318 KRTAP19-3Q7Z4W3 81 aa7.66□□□□□ -1.18
RUNX1-216ENST00000482318 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.61□□□□□ -1.19
RUNX1-216ENST00000482318 MT1GP13640 62 aa7.61□□□□□ -1.19
RUNX1-216ENST00000482318 KRTAP5-9P26371 169 aa7.61□□□□□ -1.19
RUNX1-216ENST00000482318 MUC12Q9UKN1 5478 aa7.59□□□□□ -1.2
RUNX1-216ENST00000482318 KRTAP4-7Q9BYR0 210 aa7.56□□□□□ -1.2
RUNX1-216ENST00000482318 MT1MQ8N339 61 aa7.51□□□□□ -1.21
RUNX1-216ENST00000482318 SYNE2Q8WXH0 6885 aaKnown RBP7.5□□□□□ -1.21
RUNX1-216ENST00000482318 LCE5AQ5TCM9 118 aa7.49□□□□□ -1.21
RUNX1-216ENST00000482318 KRTAP6-3Q3LI67 103 aa7.41□□□□□ -1.22
RUNX1-216ENST00000482318 KRTAP9-7A8MTY7 169 aa7.39□□□□□ -1.23
RUNX1-216ENST00000482318 KRTAP9-6A8MVA2 160 aa7.37□□□□□ -1.23
RUNX1-216ENST00000482318 LCE1AQ5T7P2 110 aa7.36□□□□□ -1.23
RUNX1-216ENST00000482318 KRTAP4-3Q9BYR4 195 aa7.32□□□□□ -1.24
RUNX1-216ENST00000482318 SPRR2EP22531 72 aa7.31□□□□□ -1.24
RUNX1-216ENST00000482318 SPRR2BP35325 72 aa7.31□□□□□ -1.24
RUNX1-216ENST00000482318 SPRR2AP35326 72 aa7.31□□□□□ -1.24
RUNX1-216ENST00000482318 H3BS24 57 aa7.3□□□□□ -1.24
RUNX1-216ENST00000482318 MDN1Q9NU22 5596 aa7.26□□□□□ -1.25
RUNX1-216ENST00000482318 LOC100996750A0A140TA64 210 aa7.1□□□□□ -1.27
RUNX1-216ENST00000482318 SPRR2DP22532 72 aa7.04□□□□□ -1.28
RUNX1-216ENST00000482318 DSTQ03001 7570 aaKnown RBP6.98□□□□□ -1.29
RUNX1-216ENST00000482318 KRTAP2-3P0C7H8 128 aa6.91□□□□□ -1.3
RUNX1-216ENST00000482318 KRTAP2-4Q9BYR9 128 aa6.91□□□□□ -1.3
RUNX1-216ENST00000482318 KRTAP2-1Q9BYU5 128 aa6.91□□□□□ -1.3
RUNX1-216ENST00000482318 A0A0A0MQY5 61 aa6.89□□□□□ -1.31
RUNX1-216ENST00000482318 NEBP20929 6669 aa6.85□□□□□ -1.31
RUNX1-216ENST00000482318 LCE3BQ5TA77 95 aa6.74□□□□□ -1.33
RUNX1-216ENST00000482318 KRTAP5-5Q701N2 237 aaPredicted RBP6.74□□□□□ -1.33
RUNX1-216ENST00000482318 MT1AP04731 61 aa6.68□□□□□ -1.34
RUNX1-216ENST00000482318 KRTAP6-1Q3LI64 71 aa6.59□□□□□ -1.36
RUNX1-216ENST00000482318 KRTAP20-1Q3LI63 56 aa6.5□□□□□ -1.37
RUNX1-216ENST00000482318 INE1O15225 51 aa6.43□□□□□ -1.38
RUNX1-216ENST00000482318 KRTAP5-4Q6L8H1 288 aa6.39□□□□□ -1.39
RUNX1-216ENST00000482318 KRTAP9-4Q9BYQ2 154 aa6.33□□□□□ -1.4
RUNX1-216ENST00000482318 KRTAP2-2Q9BYT5 123 aa6.33□□□□□ -1.4
RUNX1-216ENST00000482318 SYNE1Q8NF91 8797 aaKnown RBP6.29□□□□□ -1.4
RUNX1-216ENST00000482318 KRTAP12-4P60329 112 aa6.28□□□□□ -1.4
RUNX1-216ENST00000482318 LCE4AQ5TA78 99 aa6.27□□□□□ -1.41
RUNX1-216ENST00000482318 MT4P47944 62 aa6.08□□□□□ -1.44
RUNX1-216ENST00000482318 MT3P25713 68 aa6.06□□□□□ -1.44
RUNX1-216ENST00000482318 KRTAP6-2Q3LI66 62 aa6.05□□□□□ -1.44
RUNX1-216ENST00000482318 KRTAP4-9Q9BYQ8 210 aa6.05□□□□□ -1.44
RUNX1-216ENST00000482318 KRTAP4-6Q9BYQ5 205 aa6.03□□□□□ -1.44
RUNX1-216ENST00000482318 KRTAP20-2Q3LI61 65 aa5.96□□□□□ -1.45
RUNX1-216ENST00000482318 LCE1DQ5T752 114 aa5.96□□□□□ -1.46
RUNX1-216ENST00000482318 LCE3DQ9BYE3 92 aa5.93□□□□□ -1.46
RUNX1-216ENST00000482318 HMCN1Q96RW7 5635 aa5.87□□□□□ -1.47
RUNX1-216ENST00000482318 KRTAP5-2Q701N4 177 aa5.82□□□□□ -1.48
RUNX1-216ENST00000482318 LCE3EQ5T5B0 92 aa5.78□□□□□ -1.48
RUNX1-216ENST00000482318 KRTAP5-3Q6L8H2 238 aa5.73□□□□□ -1.49
RUNX1-216ENST00000482318 OBSCNQ5VST9 7968 aa5.44□□□□□ -1.54
RUNX1-216ENST00000482318 AHNAK2Q8IVF2 5795 aa5.25□□□□□ -1.57
RUNX1-216ENST00000482318 LCE1EQ5T753 118 aa5.23□□□□□ -1.57
RUNX1-216ENST00000482318 GPR98Q8WXG9 6306 aa5.2□□□□□ -1.58
RUNX1-216ENST00000482318 KRTAP4-11Q9BYQ6 195 aa5.14□□□□□ -1.59
RUNX1-216ENST00000482318 PRM1P04553 51 aa5.09□□□□□ -1.6
RUNX1-216ENST00000482318 KRTAP5-10Q6L8G5 202 aa5.07□□□□□ -1.6
RUNX1-216ENST00000482318 KRTAP5-1Q6L8H4 278 aa4.99□□□□□ -1.61
RUNX1-216ENST00000482318 KRTAP5-8O75690 187 aa4.92□□□□□ -1.62
RUNX1-216ENST00000482318 LCE1BQ5T7P3 118 aa4.89□□□□□ -1.63
RUNX1-216ENST00000482318 LCE1CQ5T751 118 aa4.87□□□□□ -1.63
RUNX1-216ENST00000482318 MUC5ACP98088 5654 aa4.85□□□□□ -1.63
RUNX1-216ENST00000482318 KRTAP4-2Q9BYR5 136 aa4.83□□□□□ -1.64
RUNX1-216ENST00000482318 KRTAP5-7Q6L8G8 165 aa4.82□□□□□ -1.64
RUNX1-216ENST00000482318 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.57□□□□□ -1.68
RUNX1-216ENST00000482318 KRTAP9-9Q9BYP9 154 aa4.44□□□□□ -1.7
RUNX1-216ENST00000482318 KRTAP21-2Q3LI59 83 aa4.31□□□□□ -1.72
RUNX1-216ENST00000482318 KRTAP5-11Q6L8G4 156 aa4.29□□□□□ -1.72
RUNX1-216ENST00000482318 MUC5BQ9HC84 5762 aaPredicted RBP4.25□□□□□ -1.73
RUNX1-216ENST00000482318 AHNAKQ09666 5890 aaKnown RBP4.13□□□□□ -1.75
RUNX1-216ENST00000482318 KRTAP4-12Q9BQ66 201 aa3.95□□□□□ -1.78
RUNX1-216ENST00000482318 LCE1FQ5T754 118 aa3.85□□□□□ -1.79
RUNX1-216ENST00000482318 KRTAP4-4Q9BYR3 166 aa3.8□□□□□ -1.8
RUNX1-216ENST00000482318 PHGR1C9JFL3 82 aa3.67□□□□□ -1.82
RUNX1-216ENST00000482318 MUC19Q7Z5P9 8384 aa3.2□□□□□ -1.9
RUNX1-216ENST00000482318 KRTAP21-1Q3LI58 79 aa3.13□□□□□ -1.91
RUNX1-216ENST00000482318 MUC16Q8WXI7 14507 aa2.33□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 9.5 ms