RNA–Protein interactions for RNA: ENST00000481135.1

CUL3-209, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-209ENST00000481135 ZANQ9Y493 2812 aa0.43□□□□□ -2.34
CUL3-209ENST00000481135 FLNCQ14315 2725 aa0.43□□□□□ -2.34
CUL3-209ENST00000481135 PKD1L1Q8TDX9 2849 aa0.42□□□□□ -2.34
CUL3-209ENST00000481135 APOBP04114 4563 aaKnown RBP0.42□□□□□ -2.34
CUL3-209ENST00000481135 IGSF10Q6WRI0 2623 aa0.42□□□□□ -2.34
CUL3-209ENST00000481135 SACSQ9NZJ4 4579 aa0.42□□□□□ -2.34
CUL3-209ENST00000481135 VPS13BQ7Z7G8 4022 aa0.41□□□□□ -2.34
CUL3-209ENST00000481135 DYNC2H1Q8NCM8 4307 aaKnown RBP0.41□□□□□ -2.34
CUL3-209ENST00000481135 KMT2AQ03164 3969 aa0.41□□□□□ -2.34
CUL3-209ENST00000481135 HECTD4Q9Y4D8 3996 aa0.41□□□□□ -2.34
CUL3-209ENST00000481135 MT1AP04731 61 aa0.41□□□□□ -2.34
CUL3-209ENST00000481135 MT1EP04732 61 aa0.41□□□□□ -2.34
CUL3-209ENST00000481135 MT1XP80297 61 aa0.41□□□□□ -2.34
CUL3-209ENST00000481135 MT1LQ93083 61 aa0.41□□□□□ -2.34
CUL3-209ENST00000481135 STARD9Q9P2P6 4700 aa0.4□□□□□ -2.34
CUL3-209ENST00000481135 TNXBP22105 4242 aa0.4□□□□□ -2.34
CUL3-209ENST00000481135 DNAH7Q8WXX0 4024 aa0.4□□□□□ -2.35
CUL3-209ENST00000481135 PLECQ15149 4684 aaKnown RBP0.4□□□□□ -2.35
CUL3-209ENST00000481135 DYNC1H1Q14204 4646 aaKnown RBP0.4□□□□□ -2.35
CUL3-209ENST00000481135 LRP1BQ9NZR2 4599 aa0.4□□□□□ -2.35
CUL3-209ENST00000481135 PRKDCP78527 4128 aaKnown RBP0.4□□□□□ -2.35
CUL3-209ENST00000481135 DNAH5Q8TE73 4624 aa0.39□□□□□ -2.35
CUL3-209ENST00000481135 FAT3Q8TDW7 4589 aa0.39□□□□□ -2.35
CUL3-209ENST00000481135 MT2AP02795 61 aa0.39□□□□□ -2.35
CUL3-209ENST00000481135 SPRR2AP35326 72 aa0.39□□□□□ -2.35
CUL3-209ENST00000481135 HERC1Q15751 4861 aa0.39□□□□□ -2.35
CUL3-209ENST00000481135 PKD1P98161 4303 aa0.39□□□□□ -2.35
CUL3-209ENST00000481135 PKHD1P08F94 4074 aa0.39□□□□□ -2.35
CUL3-209ENST00000481135 FAT2Q9NYQ8 4349 aa0.39□□□□□ -2.35
CUL3-209ENST00000481135 DNHD1Q96M86 4753 aa0.38□□□□□ -2.35
CUL3-209ENST00000481135 MT1FP04733 61 aa0.38□□□□□ -2.35
CUL3-209ENST00000481135 MT1BP07438 61 aa0.38□□□□□ -2.35
CUL3-209ENST00000481135 MT1GP13640 62 aa0.38□□□□□ -2.35
CUL3-209ENST00000481135 SPRR2BP35325 72 aa0.38□□□□□ -2.35
CUL3-209ENST00000481135 MT1HP80294 61 aa0.38□□□□□ -2.35
CUL3-209ENST00000481135 PKHD1L1Q86WI1 4243 aa0.38□□□□□ -2.35
CUL3-209ENST00000481135 HSPG2P98160 4391 aa0.37□□□□□ -2.35
CUL3-209ENST00000481135 SPRR2DP22532 72 aa0.37□□□□□ -2.35
CUL3-209ENST00000481135 KRTAP19-2Q3LHN2 52 aa0.37□□□□□ -2.35
CUL3-209ENST00000481135 SPRR2FQ96RM1 72 aa0.37□□□□□ -2.35
CUL3-209ENST00000481135 FAT1Q14517 4588 aa0.36□□□□□ -2.35
CUL3-209ENST00000481135 KRTAP6-2Q3LI66 62 aa0.36□□□□□ -2.35
CUL3-209ENST00000481135 FLGP20930 4061 aaPredicted RBP0.36□□□□□ -2.35
CUL3-209ENST00000481135 HYDINQ4G0P3 5121 aa0.36□□□□□ -2.35
CUL3-209ENST00000481135 RYR1P21817 5038 aa0.36□□□□□ -2.35
CUL3-209ENST00000481135 KMT2DO14686 5537 aa0.35□□□□□ -2.35
CUL3-209ENST00000481135 SPRR2EP22531 72 aa0.35□□□□□ -2.35
CUL3-209ENST00000481135 KRTAP19-7Q3SYF9 63 aa0.35□□□□□ -2.35
CUL3-209ENST00000481135 MT1MQ8N339 61 aa0.35□□□□□ -2.35
CUL3-209ENST00000481135 MUC2Q02817 5179 aa0.35□□□□□ -2.35
CUL3-209ENST00000481135 RYR2Q92736 4967 aa0.35□□□□□ -2.35
CUL3-209ENST00000481135 LRP2P98164 4655 aa0.34□□□□□ -2.35
CUL3-209ENST00000481135 RYR3Q15413 4870 aa0.34□□□□□ -2.36
CUL3-209ENST00000481135 KMT2CQ8NEZ4 4911 aaKnown RBP0.33□□□□□ -2.36
CUL3-209ENST00000481135 HERC2O95714 4834 aa0.33□□□□□ -2.36
CUL3-209ENST00000481135 LPAP08519 4548 aa0.33□□□□□ -2.36
CUL3-209ENST00000481135 UBR4Q5T4S7 5183 aa0.32□□□□□ -2.36
CUL3-209ENST00000481135 ABCA13Q86UQ4 5058 aa0.32□□□□□ -2.36
CUL3-209ENST00000481135 HMCN2Q8NDA2 5059 aa0.32□□□□□ -2.36
CUL3-209ENST00000481135 MUC17Q685J3 4493 aa0.31□□□□□ -2.36
CUL3-209ENST00000481135 USH2AO75445 5202 aa0.31□□□□□ -2.36
CUL3-209ENST00000481135 EPPK1P58107 5090 aaKnown RBP0.31□□□□□ -2.36
CUL3-209ENST00000481135 PCLOQ9Y6V0 5065 aa0.31□□□□□ -2.36
CUL3-209ENST00000481135 BIRC6Q9NR09 4857 aa0.3□□□□□ -2.36
CUL3-209ENST00000481135 KRTAP6-1Q3LI64 71 aa0.3□□□□□ -2.36
CUL3-209ENST00000481135 SYNE2Q8WXH0 6885 aaKnown RBP0.29□□□□□ -2.36
CUL3-209ENST00000481135 KIAA1109Q2LD37 5005 aa0.29□□□□□ -2.36
CUL3-209ENST00000481135 RNF213Q63HN8 5207 aa0.29□□□□□ -2.36
CUL3-209ENST00000481135 SSPOA2VEC9 5147 aa0.29□□□□□ -2.36
CUL3-209ENST00000481135 KRTAP19-6Q3LI70 58 aa0.28□□□□□ -2.36
CUL3-209ENST00000481135 FSIP2Q5CZC0 6907 aa0.26□□□□□ -2.37
CUL3-209ENST00000481135 DSTQ03001 7570 aaKnown RBP0.26□□□□□ -2.37
CUL3-209ENST00000481135 MUC12Q9UKN1 5478 aa0.24□□□□□ -2.37
CUL3-209ENST00000481135 MT4P47944 62 aa0.2□□□□□ -2.38
CUL3-209ENST00000481135 MACF1Q9UPN3 7388 aaKnown RBP0.19□□□□□ -2.38
CUL3-209ENST00000481135 KRTAP20-2Q3LI61 65 aa0.19□□□□□ -2.38
CUL3-209ENST00000481135 KRTAP20-1Q3LI63 56 aa0.18□□□□□ -2.38
CUL3-209ENST00000481135 NEBP20929 6669 aa0.15□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 42.6 ms