RNA–Protein interactions for RNA: ENST00000481038.5

GPCPD1-205, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 2

Gene GPCPD1, Length 6,649 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-205ENST00000481038 KRTAP4-12Q9BQ66 201 aa1.54□□□□□ -2.16
GPCPD1-205ENST00000481038 PRM1P04553 51 aa1.54□□□□□ -2.16
GPCPD1-205ENST00000481038 MT1GP13640 62 aa1.53□□□□□ -2.16
GPCPD1-205ENST00000481038 SPRR2EP22531 72 aa1.53□□□□□ -2.17
GPCPD1-205ENST00000481038 SPRR2BP35325 72 aa1.53□□□□□ -2.17
GPCPD1-205ENST00000481038 SPRR2AP35326 72 aa1.53□□□□□ -2.17
GPCPD1-205ENST00000481038 FLGP20930 4061 aaPredicted RBP1.53□□□□□ -2.17
GPCPD1-205ENST00000481038 LCE3EQ5T5B0 92 aa1.52□□□□□ -2.17
GPCPD1-205ENST00000481038 KRTAP9-6A0A140TA67 174 aa1.52□□□□□ -2.17
GPCPD1-205ENST00000481038 LCE3DQ9BYE3 92 aa1.51□□□□□ -2.17
GPCPD1-205ENST00000481038 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.51□□□□□ -2.17
GPCPD1-205ENST00000481038 LCE3BQ5TA77 95 aa1.51□□□□□ -2.17
GPCPD1-205ENST00000481038 SPRR2DP22532 72 aa1.49□□□□□ -2.17
GPCPD1-205ENST00000481038 KRTAP5-2Q701N4 177 aa1.48□□□□□ -2.17
GPCPD1-205ENST00000481038 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.48□□□□□ -2.17
GPCPD1-205ENST00000481038 KRTAP19-3Q7Z4W3 81 aa1.47□□□□□ -2.17
GPCPD1-205ENST00000481038 KRTAP6-3Q3LI67 103 aa1.46□□□□□ -2.18
GPCPD1-205ENST00000481038 LCE1AQ5T7P2 110 aa1.45□□□□□ -2.18
GPCPD1-205ENST00000481038 KMT2DO14686 5537 aa1.45□□□□□ -2.18
GPCPD1-205ENST00000481038 LCE5AQ5TCM9 118 aa1.45□□□□□ -2.18
GPCPD1-205ENST00000481038 FSIP2Q5CZC0 6907 aa1.44□□□□□ -2.18
GPCPD1-205ENST00000481038 MT1EP04732 61 aa1.44□□□□□ -2.18
GPCPD1-205ENST00000481038 MT1LQ93083 61 aa1.44□□□□□ -2.18
GPCPD1-205ENST00000481038 MUC12Q9UKN1 5478 aa1.42□□□□□ -2.18
GPCPD1-205ENST00000481038 KRTAP9-7A8MTY7 169 aa1.42□□□□□ -2.18
GPCPD1-205ENST00000481038 MDN1Q9NU22 5596 aa1.41□□□□□ -2.18
GPCPD1-205ENST00000481038 LPAP08519 4548 aa1.41□□□□□ -2.18
GPCPD1-205ENST00000481038 LCE4AQ5TA78 99 aa1.41□□□□□ -2.18
GPCPD1-205ENST00000481038 FCGBPQ9Y6R7 5405 aaPredicted RBP1.4□□□□□ -2.18
GPCPD1-205ENST00000481038 KRTAP4-8A0A0G2JLE6 195 aa1.4□□□□□ -2.19
GPCPD1-205ENST00000481038 KRTAP2-3P0C7H8 128 aa1.39□□□□□ -2.19
GPCPD1-205ENST00000481038 KRTAP2-4Q9BYR9 128 aa1.39□□□□□ -2.19
GPCPD1-205ENST00000481038 KRTAP2-1Q9BYU5 128 aa1.39□□□□□ -2.19
GPCPD1-205ENST00000481038 MT1MQ8N339 61 aa1.38□□□□□ -2.19
GPCPD1-205ENST00000481038 KRTAP20-1Q3LI63 56 aa1.36□□□□□ -2.19
GPCPD1-205ENST00000481038 KRTAP2-2Q9BYT5 123 aa1.36□□□□□ -2.19
GPCPD1-205ENST00000481038 KRTAP19-7Q3SYF9 63 aa1.35□□□□□ -2.19
GPCPD1-205ENST00000481038 KRTAP4-7Q9BYR0 210 aa1.34□□□□□ -2.2
GPCPD1-205ENST00000481038 KRTAP4-9Q9BYQ8 210 aa1.33□□□□□ -2.2
GPCPD1-205ENST00000481038 LCE1DQ5T752 114 aa1.32□□□□□ -2.2
GPCPD1-205ENST00000481038 KRTAP5-9P26371 169 aa1.32□□□□□ -2.2
GPCPD1-205ENST00000481038 KRTAP4-2Q9BYR5 136 aa1.31□□□□□ -2.2
GPCPD1-205ENST00000481038 MT1AP04731 61 aa1.3□□□□□ -2.2
GPCPD1-205ENST00000481038 LCE1EQ5T753 118 aa1.3□□□□□ -2.2
GPCPD1-205ENST00000481038 HMCN1Q96RW7 5635 aa1.29□□□□□ -2.2
GPCPD1-205ENST00000481038 KRTAP4-11Q9BYQ6 195 aa1.28□□□□□ -2.2
GPCPD1-205ENST00000481038 KRTAP6-2Q3LI66 62 aa1.28□□□□□ -2.21
GPCPD1-205ENST00000481038 SYNE1Q8NF91 8797 aaKnown RBP1.26□□□□□ -2.21
GPCPD1-205ENST00000481038 MACF1Q9UPN3 7388 aaKnown RBP1.25□□□□□ -2.21
GPCPD1-205ENST00000481038 LCE1FQ5T754 118 aa1.25□□□□□ -2.21
GPCPD1-205ENST00000481038 GPR98Q8WXG9 6306 aa1.24□□□□□ -2.21
GPCPD1-205ENST00000481038 MUC19Q7Z5P9 8384 aa1.22□□□□□ -2.21
GPCPD1-205ENST00000481038 AHNAK2Q8IVF2 5795 aa1.22□□□□□ -2.21
GPCPD1-205ENST00000481038 MT4P47944 62 aa1.22□□□□□ -2.21
GPCPD1-205ENST00000481038 AHNAKQ09666 5890 aaKnown RBP1.2□□□□□ -2.22
GPCPD1-205ENST00000481038 KRTAP4-3Q9BYR4 195 aa1.18□□□□□ -2.22
GPCPD1-205ENST00000481038 KRTAP9-6A8MVA2 160 aa1.18□□□□□ -2.22
GPCPD1-205ENST00000481038 KRTAP5-7Q6L8G8 165 aa1.16□□□□□ -2.22
GPCPD1-205ENST00000481038 NEBP20929 6669 aa1.15□□□□□ -2.23
GPCPD1-205ENST00000481038 KRTAP6-1Q3LI64 71 aa1.14□□□□□ -2.23
GPCPD1-205ENST00000481038 LCE1BQ5T7P3 118 aa1.14□□□□□ -2.23
GPCPD1-205ENST00000481038 SYNE2Q8WXH0 6885 aaKnown RBP1.14□□□□□ -2.23
GPCPD1-205ENST00000481038 KRTAP5-4Q6L8H1 288 aa1.12□□□□□ -2.23
GPCPD1-205ENST00000481038 DSTQ03001 7570 aaKnown RBP1.12□□□□□ -2.23
GPCPD1-205ENST00000481038 MUC5ACP98088 5654 aa1.11□□□□□ -2.23
GPCPD1-205ENST00000481038 KRTAP20-2Q3LI61 65 aa1.08□□□□□ -2.24
GPCPD1-205ENST00000481038 KRTAP5-5Q701N2 237 aaPredicted RBP1.08□□□□□ -2.24
GPCPD1-205ENST00000481038 KRTAP5-3Q6L8H2 238 aa1.07□□□□□ -2.24
GPCPD1-205ENST00000481038 KRTAP5-10Q6L8G5 202 aa1.03□□□□□ -2.24
GPCPD1-205ENST00000481038 KRTAP5-8O75690 187 aa1□□□□□ -2.25
GPCPD1-205ENST00000481038 KRTAP5-1Q6L8H4 278 aa0.96□□□□□ -2.26
GPCPD1-205ENST00000481038 LCE1CQ5T751 118 aa0.93□□□□□ -2.26
GPCPD1-205ENST00000481038 KRTAP5-11Q6L8G4 156 aa0.91□□□□□ -2.26
GPCPD1-205ENST00000481038 KRTAP4-4Q9BYR3 166 aa0.81□□□□□ -2.28
GPCPD1-205ENST00000481038 KRTAP21-1Q3LI58 79 aa0.73□□□□□ -2.29
GPCPD1-205ENST00000481038 KRTAP21-2Q3LI59 83 aa0.67□□□□□ -2.3
GPCPD1-205ENST00000481038 PHGR1C9JFL3 82 aa0.64□□□□□ -2.31
GPCPD1-205ENST00000481038 MUC16Q8WXI7 14507 aa0.45□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 6.7 ms