RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 SSPOA2VEC9 5147 aa4.88□□□□□ -1.63
NR1H3-220ENST00000481020 MT1LQ93083 61 aa4.88□□□□□ -1.63
NR1H3-220ENST00000481020 MT1EP04732 61 aa4.84□□□□□ -1.63
NR1H3-220ENST00000481020 KRTAP4-7Q9BYR0 210 aa4.77□□□□□ -1.65
NR1H3-220ENST00000481020 FCGBPQ9Y6R7 5405 aaPredicted RBP4.68□□□□□ -1.66
NR1H3-220ENST00000481020 KMT2DO14686 5537 aa4.63□□□□□ -1.67
NR1H3-220ENST00000481020 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.61□□□□□ -1.67
NR1H3-220ENST00000481020 MT1GP13640 62 aa4.55□□□□□ -1.68
NR1H3-220ENST00000481020 MACF1Q9UPN3 7388 aaKnown RBP4.53□□□□□ -1.68
NR1H3-220ENST00000481020 KRTAP9-7A8MTY7 169 aa4.5□□□□□ -1.69
NR1H3-220ENST00000481020 KRTAP19-3Q7Z4W3 81 aa4.5□□□□□ -1.69
NR1H3-220ENST00000481020 MT1MQ8N339 61 aa4.5□□□□□ -1.69
NR1H3-220ENST00000481020 KRTAP12-4P60329 112 aa4.49□□□□□ -1.69
NR1H3-220ENST00000481020 SYNE2Q8WXH0 6885 aaKnown RBP4.45□□□□□ -1.7
NR1H3-220ENST00000481020 LOC100996750A0A140TA64 210 aa4.43□□□□□ -1.7
NR1H3-220ENST00000481020 KRTAP4-3Q9BYR4 195 aa4.39□□□□□ -1.71
NR1H3-220ENST00000481020 KRTAP6-3Q3LI67 103 aa4.38□□□□□ -1.71
NR1H3-220ENST00000481020 MT1AP04731 61 aa4.38□□□□□ -1.71
NR1H3-220ENST00000481020 SPRR2FQ96RM1 72 aa4.35□□□□□ -1.71
NR1H3-220ENST00000481020 LCE5AQ5TCM9 118 aa4.32□□□□□ -1.72
NR1H3-220ENST00000481020 KRTAP5-9P26371 169 aa4.29□□□□□ -1.72
NR1H3-220ENST00000481020 MUC12Q9UKN1 5478 aa4.27□□□□□ -1.73
NR1H3-220ENST00000481020 LCE3BQ5TA77 95 aa4.18□□□□□ -1.74
NR1H3-220ENST00000481020 LCE1AQ5T7P2 110 aa4.16□□□□□ -1.74
NR1H3-220ENST00000481020 LCE3EQ5T5B0 92 aa4.15□□□□□ -1.75
NR1H3-220ENST00000481020 LCE3DQ9BYE3 92 aa4.15□□□□□ -1.75
NR1H3-220ENST00000481020 SPRR2EP22531 72 aa4.12□□□□□ -1.75
NR1H3-220ENST00000481020 SPRR2BP35325 72 aa4.12□□□□□ -1.75
NR1H3-220ENST00000481020 SPRR2AP35326 72 aa4.12□□□□□ -1.75
NR1H3-220ENST00000481020 MDN1Q9NU22 5596 aa4.12□□□□□ -1.75
NR1H3-220ENST00000481020 NEBP20929 6669 aa4.1□□□□□ -1.75
NR1H3-220ENST00000481020 KRTAP6-1Q3LI64 71 aa4.07□□□□□ -1.76
NR1H3-220ENST00000481020 KRTAP4-9Q9BYQ8 210 aa4.03□□□□□ -1.76
NR1H3-220ENST00000481020 KRTAP5-5Q701N2 237 aaPredicted RBP4.01□□□□□ -1.77
NR1H3-220ENST00000481020 SPRR2DP22532 72 aa3.98□□□□□ -1.77
NR1H3-220ENST00000481020 PRM1P04553 51 aa3.97□□□□□ -1.77
NR1H3-220ENST00000481020 KRTAP20-1Q3LI63 56 aa3.97□□□□□ -1.77
NR1H3-220ENST00000481020 DSTQ03001 7570 aaKnown RBP3.94□□□□□ -1.78
NR1H3-220ENST00000481020 KRTAP9-4Q9BYQ2 154 aa3.87□□□□□ -1.79
NR1H3-220ENST00000481020 KRTAP2-2Q9BYT5 123 aa3.81□□□□□ -1.8
NR1H3-220ENST00000481020 SYNE1Q8NF91 8797 aaKnown RBP3.81□□□□□ -1.8
NR1H3-220ENST00000481020 KRTAP6-2Q3LI66 62 aa3.79□□□□□ -1.8
NR1H3-220ENST00000481020 MT3P25713 68 aa3.73□□□□□ -1.81
NR1H3-220ENST00000481020 KRTAP5-4Q6L8H1 288 aa3.6□□□□□ -1.83
NR1H3-220ENST00000481020 LCE4AQ5TA78 99 aa3.53□□□□□ -1.85
NR1H3-220ENST00000481020 GPR98Q8WXG9 6306 aa3.45□□□□□ -1.86
NR1H3-220ENST00000481020 MT4P47944 62 aa3.45□□□□□ -1.86
NR1H3-220ENST00000481020 LCE1DQ5T752 114 aa3.44□□□□□ -1.86
NR1H3-220ENST00000481020 KRTAP4-6Q9BYQ5 205 aa3.42□□□□□ -1.86
NR1H3-220ENST00000481020 KRTAP20-2Q3LI61 65 aa3.36□□□□□ -1.87
NR1H3-220ENST00000481020 HMCN1Q96RW7 5635 aa3.33□□□□□ -1.88
NR1H3-220ENST00000481020 KRTAP5-2Q701N4 177 aa3.27□□□□□ -1.89
NR1H3-220ENST00000481020 KRTAP5-3Q6L8H2 238 aa3.24□□□□□ -1.89
NR1H3-220ENST00000481020 OBSCNQ5VST9 7968 aa3.2□□□□□ -1.9
NR1H3-220ENST00000481020 AHNAK2Q8IVF2 5795 aa3.1□□□□□ -1.91
NR1H3-220ENST00000481020 KRTAP5-10Q6L8G5 202 aa3.07□□□□□ -1.92
NR1H3-220ENST00000481020 LCE1EQ5T753 118 aa3.07□□□□□ -1.92
NR1H3-220ENST00000481020 KRTAP5-1Q6L8H4 278 aa2.99□□□□□ -1.93
NR1H3-220ENST00000481020 MUC5ACP98088 5654 aa2.97□□□□□ -1.93
NR1H3-220ENST00000481020 KRTAP4-11Q9BYQ6 195 aa2.93□□□□□ -1.94
NR1H3-220ENST00000481020 KRTAP5-7Q6L8G8 165 aa2.93□□□□□ -1.94
NR1H3-220ENST00000481020 LCE1FQ5T754 118 aa2.89□□□□□ -1.95
NR1H3-220ENST00000481020 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
NR1H3-220ENST00000481020 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
NR1H3-220ENST00000481020 KRTAP5-8O75690 187 aa2.82□□□□□ -1.96
NR1H3-220ENST00000481020 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.77□□□□□ -1.97
NR1H3-220ENST00000481020 KRTAP4-2Q9BYR5 136 aa2.77□□□□□ -1.97
NR1H3-220ENST00000481020 KRTAP21-2Q3LI59 83 aa2.66□□□□□ -1.98
NR1H3-220ENST00000481020 KRTAP9-9Q9BYP9 154 aa2.66□□□□□ -1.98
NR1H3-220ENST00000481020 AHNAKQ09666 5890 aaKnown RBP2.65□□□□□ -1.99
NR1H3-220ENST00000481020 KRTAP21-1Q3LI58 79 aa2.62□□□□□ -1.99
NR1H3-220ENST00000481020 MUC5BQ9HC84 5762 aaPredicted RBP2.54□□□□□ -2
NR1H3-220ENST00000481020 KRTAP5-11Q6L8G4 156 aa2.44□□□□□ -2.02
NR1H3-220ENST00000481020 KRTAP4-12Q9BQ66 201 aa2.25□□□□□ -2.05
NR1H3-220ENST00000481020 KRTAP4-4Q9BYR3 166 aa2.24□□□□□ -2.05
NR1H3-220ENST00000481020 PHGR1C9JFL3 82 aa2.08□□□□□ -2.08
NR1H3-220ENST00000481020 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
NR1H3-220ENST00000481020 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 1840.9 ms