RNA–Protein interactions for RNA: ENST00000480897.5

SNAP47-210, Transcript of synaptosome associated protein 47, humanhuman

TSL 2

Gene SNAP47, Length 2,375 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-210ENST00000480897 CRCT1Q9UGL9 99 aa6.13□□□□□ -1.43
SNAP47-210ENST00000480897 MACF1Q9UPN3 7388 aaKnown RBP6□□□□□ -1.45
SNAP47-210ENST00000480897 KRTAP19-4Q3LI73 84 aa5.98□□□□□ -1.45
SNAP47-210ENST00000480897 MUC12Q9UKN1 5478 aa5.95□□□□□ -1.46
SNAP47-210ENST00000480897 KRTAP2-3P0C7H8 128 aa5.93□□□□□ -1.46
SNAP47-210ENST00000480897 KRTAP4-3Q9BYR4 195 aa5.93□□□□□ -1.46
SNAP47-210ENST00000480897 KRTAP2-4Q9BYR9 128 aa5.93□□□□□ -1.46
SNAP47-210ENST00000480897 KRTAP2-1Q9BYU5 128 aa5.93□□□□□ -1.46
SNAP47-210ENST00000480897 LOC100996750A0A140TA64 210 aa5.87□□□□□ -1.47
SNAP47-210ENST00000480897 SYNE2Q8WXH0 6885 aaKnown RBP5.86□□□□□ -1.47
SNAP47-210ENST00000480897 KRTAP9-6A0A140TA67 174 aa5.8□□□□□ -1.48
SNAP47-210ENST00000480897 MT1GP13640 62 aa5.8□□□□□ -1.48
SNAP47-210ENST00000480897 KRTAP19-3Q7Z4W3 81 aa5.8□□□□□ -1.48
SNAP47-210ENST00000480897 MT1MQ8N339 61 aa5.8□□□□□ -1.48
SNAP47-210ENST00000480897 SPRR2FQ96RM1 72 aa5.79□□□□□ -1.48
SNAP47-210ENST00000480897 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.67□□□□□ -1.5
SNAP47-210ENST00000480897 KRTAP5-9P26371 169 aa5.63□□□□□ -1.51
SNAP47-210ENST00000480897 DSTQ03001 7570 aaKnown RBP5.63□□□□□ -1.51
SNAP47-210ENST00000480897 LCE5AQ5TCM9 118 aa5.62□□□□□ -1.51
SNAP47-210ENST00000480897 MDN1Q9NU22 5596 aa5.56□□□□□ -1.52
SNAP47-210ENST00000480897 KRTAP6-3Q3LI67 103 aa5.51□□□□□ -1.53
SNAP47-210ENST00000480897 LCE1AQ5T7P2 110 aa5.51□□□□□ -1.53
SNAP47-210ENST00000480897 SPRR2EP22531 72 aa5.47□□□□□ -1.53
SNAP47-210ENST00000480897 SPRR2BP35325 72 aa5.47□□□□□ -1.53
SNAP47-210ENST00000480897 SPRR2AP35326 72 aa5.47□□□□□ -1.53
SNAP47-210ENST00000480897 LCE3BQ5TA77 95 aa5.34□□□□□ -1.55
SNAP47-210ENST00000480897 KRTAP9-7A8MTY7 169 aa5.33□□□□□ -1.56
SNAP47-210ENST00000480897 KRTAP6-1Q3LI64 71 aa5.27□□□□□ -1.57
SNAP47-210ENST00000480897 SPRR2DP22532 72 aa5.26□□□□□ -1.57
SNAP47-210ENST00000480897 KRTAP12-4P60329 112 aa5.24□□□□□ -1.57
SNAP47-210ENST00000480897 KRTAP4-9Q9BYQ8 210 aa5.24□□□□□ -1.57
SNAP47-210ENST00000480897 NEBP20929 6669 aa5.17□□□□□ -1.58
SNAP47-210ENST00000480897 SYNE1Q8NF91 8797 aaKnown RBP5.17□□□□□ -1.58
SNAP47-210ENST00000480897 MT1AP04731 61 aa5.16□□□□□ -1.58
SNAP47-210ENST00000480897 KRTAP5-5Q701N2 237 aaPredicted RBP5.12□□□□□ -1.59
SNAP47-210ENST00000480897 LCE3DQ9BYE3 92 aa4.95□□□□□ -1.62
SNAP47-210ENST00000480897 KRTAP9-4Q9BYQ2 154 aa4.87□□□□□ -1.63
SNAP47-210ENST00000480897 LCE3EQ5T5B0 92 aa4.86□□□□□ -1.63
SNAP47-210ENST00000480897 KRTAP6-2Q3LI66 62 aa4.74□□□□□ -1.65
SNAP47-210ENST00000480897 KRTAP5-4Q6L8H1 288 aa4.72□□□□□ -1.65
SNAP47-210ENST00000480897 KRTAP20-1Q3LI63 56 aa4.71□□□□□ -1.65
SNAP47-210ENST00000480897 KRTAP2-2Q9BYT5 123 aa4.71□□□□□ -1.65
SNAP47-210ENST00000480897 OBSCNQ5VST9 7968 aa4.67□□□□□ -1.66
SNAP47-210ENST00000480897 PRM1P04553 51 aa4.64□□□□□ -1.67
SNAP47-210ENST00000480897 MT3P25713 68 aa4.63□□□□□ -1.67
SNAP47-210ENST00000480897 MT4P47944 62 aa4.62□□□□□ -1.67
SNAP47-210ENST00000480897 KRTAP4-6Q9BYQ5 205 aa4.6□□□□□ -1.67
SNAP47-210ENST00000480897 LCE4AQ5TA78 99 aa4.59□□□□□ -1.67
SNAP47-210ENST00000480897 LCE1DQ5T752 114 aa4.49□□□□□ -1.69
SNAP47-210ENST00000480897 HMCN1Q96RW7 5635 aa4.45□□□□□ -1.7
SNAP47-210ENST00000480897 KRTAP20-2Q3LI61 65 aa4.45□□□□□ -1.7
SNAP47-210ENST00000480897 KRTAP5-2Q701N4 177 aa4.29□□□□□ -1.72
SNAP47-210ENST00000480897 KRTAP5-3Q6L8H2 238 aa4.27□□□□□ -1.73
SNAP47-210ENST00000480897 MUC5ACP98088 5654 aa3.96□□□□□ -1.78
SNAP47-210ENST00000480897 AHNAK2Q8IVF2 5795 aa3.87□□□□□ -1.79
SNAP47-210ENST00000480897 GPR98Q8WXG9 6306 aa3.85□□□□□ -1.79
SNAP47-210ENST00000480897 KRTAP4-11Q9BYQ6 195 aa3.84□□□□□ -1.79
SNAP47-210ENST00000480897 LCE1BQ5T7P3 118 aa3.82□□□□□ -1.8
SNAP47-210ENST00000480897 LCE1EQ5T753 118 aa3.79□□□□□ -1.8
SNAP47-210ENST00000480897 KRTAP5-1Q6L8H4 278 aa3.74□□□□□ -1.81
SNAP47-210ENST00000480897 KRTAP5-8O75690 187 aa3.7□□□□□ -1.82
SNAP47-210ENST00000480897 KRTAP5-10Q6L8G5 202 aa3.66□□□□□ -1.82
SNAP47-210ENST00000480897 KRTAP4-2Q9BYR5 136 aa3.65□□□□□ -1.83
SNAP47-210ENST00000480897 LCE1CQ5T751 118 aa3.59□□□□□ -1.83
SNAP47-210ENST00000480897 KRTAP5-7Q6L8G8 165 aa3.53□□□□□ -1.84
SNAP47-210ENST00000480897 KRTAP21-2Q3LI59 83 aa3.39□□□□□ -1.87
SNAP47-210ENST00000480897 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.37□□□□□ -1.87
SNAP47-210ENST00000480897 KRTAP9-9Q9BYP9 154 aa3.3□□□□□ -1.88
SNAP47-210ENST00000480897 MUC5BQ9HC84 5762 aaPredicted RBP3.23□□□□□ -1.89
SNAP47-210ENST00000480897 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
SNAP47-210ENST00000480897 KRTAP5-11Q6L8G4 156 aa3.12□□□□□ -1.91
SNAP47-210ENST00000480897 KRTAP4-12Q9BQ66 201 aa3.08□□□□□ -1.92
SNAP47-210ENST00000480897 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
SNAP47-210ENST00000480897 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.95
SNAP47-210ENST00000480897 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
SNAP47-210ENST00000480897 KRTAP21-1Q3LI58 79 aa2.86□□□□□ -1.95
SNAP47-210ENST00000480897 PHGR1C9JFL3 82 aa2.71□□□□□ -1.98
SNAP47-210ENST00000480897 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 49.3 ms