RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 MT1GP13640 62 aa5.19□□□□□ -1.58
SNRNP200-205ENST00000480835 KRTAP9-7A8MTY7 169 aa5.17□□□□□ -1.58
SNRNP200-205ENST00000480835 LCE3CQ5T5A8 94 aa5.16□□□□□ -1.58
SNRNP200-205ENST00000480835 LCE1AQ5T7P2 110 aa5.14□□□□□ -1.59
SNRNP200-205ENST00000480835 LCE5AQ5TCM9 118 aa5.14□□□□□ -1.59
SNRNP200-205ENST00000480835 MUC12Q9UKN1 5478 aa5.13□□□□□ -1.59
SNRNP200-205ENST00000480835 SPRR2EP22531 72 aa5.12□□□□□ -1.59
SNRNP200-205ENST00000480835 SPRR2BP35325 72 aa5.12□□□□□ -1.59
SNRNP200-205ENST00000480835 SPRR2AP35326 72 aa5.12□□□□□ -1.59
SNRNP200-205ENST00000480835 MT1MQ8N339 61 aa5.1□□□□□ -1.59
SNRNP200-205ENST00000480835 SPRR5A0A1B0GTR4 108 aa5.09□□□□□ -1.59
SNRNP200-205ENST00000480835 SYNE2Q8WXH0 6885 aaKnown RBP5.09□□□□□ -1.6
SNRNP200-205ENST00000480835 KRTAP4-7Q9BYR0 210 aa5.03□□□□□ -1.6
SNRNP200-205ENST00000480835 MDN1Q9NU22 5596 aa4.97□□□□□ -1.61
SNRNP200-205ENST00000480835 SPRR2DP22532 72 aa4.94□□□□□ -1.62
SNRNP200-205ENST00000480835 KRTAP4-3Q9BYR4 195 aa4.92□□□□□ -1.62
SNRNP200-205ENST00000480835 LUZP6Q538Z0 58 aa4.89□□□□□ -1.63
SNRNP200-205ENST00000480835 KRTAP9-6A8MVA2 160 aa4.82□□□□□ -1.64
SNRNP200-205ENST00000480835 LCE3BQ5TA77 95 aa4.75□□□□□ -1.65
SNRNP200-205ENST00000480835 NEBP20929 6669 aa4.75□□□□□ -1.65
SNRNP200-205ENST00000480835 LOC100996750A0A140TA64 210 aa4.73□□□□□ -1.65
SNRNP200-205ENST00000480835 KRTAP2-3P0C7H8 128 aa4.68□□□□□ -1.66
SNRNP200-205ENST00000480835 KRTAP2-4Q9BYR9 128 aa4.68□□□□□ -1.66
SNRNP200-205ENST00000480835 NDUFAF8A1L188 74 aa4.63□□□□□ -1.67
SNRNP200-205ENST00000480835 KRTAP20-1Q3LI63 56 aa4.61□□□□□ -1.67
SNRNP200-205ENST00000480835 KRTAP5-5Q701N2 237 aaPredicted RBP4.6□□□□□ -1.67
SNRNP200-205ENST00000480835 DSTQ03001 7570 aaKnown RBP4.57□□□□□ -1.68
SNRNP200-205ENST00000480835 KRTAP2-2Q9BYT5 123 aa4.57□□□□□ -1.68
SNRNP200-205ENST00000480835 KRTAP2-1Q9BYU5 128 aa4.57□□□□□ -1.68
SNRNP200-205ENST00000480835 MT1AP04731 61 aa4.52□□□□□ -1.69
SNRNP200-205ENST00000480835 KRTAP5-4Q6L8H1 288 aa4.46□□□□□ -1.7
SNRNP200-205ENST00000480835 KRTAP6-1Q3LI64 71 aa4.43□□□□□ -1.7
SNRNP200-205ENST00000480835 LCE4AQ5TA78 99 aa4.43□□□□□ -1.7
SNRNP200-205ENST00000480835 KRTAP12-4P60329 112 aa4.34□□□□□ -1.71
SNRNP200-205ENST00000480835 KRTAP9-4Q9BYQ2 154 aa4.29□□□□□ -1.72
SNRNP200-205ENST00000480835 H3BS24 57 aa4.26□□□□□ -1.73
SNRNP200-205ENST00000480835 MT4P47944 62 aa4.25□□□□□ -1.73
SNRNP200-205ENST00000480835 LCE1DQ5T752 114 aa4.22□□□□□ -1.73
SNRNP200-205ENST00000480835 KRTAP4-6Q9BYQ5 205 aa4.2□□□□□ -1.74
SNRNP200-205ENST00000480835 KRTAP4-9Q9BYQ8 210 aa4.2□□□□□ -1.74
SNRNP200-205ENST00000480835 KRTAP20-2Q3LI61 65 aa4.16□□□□□ -1.74
SNRNP200-205ENST00000480835 SYNE1Q8NF91 8797 aaKnown RBP4.15□□□□□ -1.74
SNRNP200-205ENST00000480835 GPR98Q8WXG9 6306 aa4.14□□□□□ -1.75
SNRNP200-205ENST00000480835 A0A0A0MQY5 61 aa4.11□□□□□ -1.75
SNRNP200-205ENST00000480835 MT3P25713 68 aa4.11□□□□□ -1.75
SNRNP200-205ENST00000480835 KRTAP6-2Q3LI66 62 aa4.09□□□□□ -1.75
SNRNP200-205ENST00000480835 HMCN1Q96RW7 5635 aa4.03□□□□□ -1.76
SNRNP200-205ENST00000480835 KRTAP5-2Q701N4 177 aa4.03□□□□□ -1.76
SNRNP200-205ENST00000480835 KRTAP5-3Q6L8H2 238 aa4.01□□□□□ -1.77
SNRNP200-205ENST00000480835 INE1O15225 51 aa3.89□□□□□ -1.79
SNRNP200-205ENST00000480835 LCE3DQ9BYE3 92 aa3.87□□□□□ -1.79
SNRNP200-205ENST00000480835 LCE3EQ5T5B0 92 aa3.76□□□□□ -1.81
SNRNP200-205ENST00000480835 AHNAK2Q8IVF2 5795 aa3.65□□□□□ -1.83
SNRNP200-205ENST00000480835 KRTAP4-11Q9BYQ6 195 aa3.63□□□□□ -1.83
SNRNP200-205ENST00000480835 LCE1EQ5T753 118 aa3.6□□□□□ -1.83
SNRNP200-205ENST00000480835 OBSCNQ5VST9 7968 aa3.58□□□□□ -1.84
SNRNP200-205ENST00000480835 KRTAP5-10Q6L8G5 202 aa3.56□□□□□ -1.84
SNRNP200-205ENST00000480835 KRTAP5-8O75690 187 aa3.49□□□□□ -1.85
SNRNP200-205ENST00000480835 KRTAP5-1Q6L8H4 278 aa3.48□□□□□ -1.85
SNRNP200-205ENST00000480835 KRTAP5-7Q6L8G8 165 aa3.4□□□□□ -1.87
SNRNP200-205ENST00000480835 LCE1CQ5T751 118 aa3.34□□□□□ -1.87
SNRNP200-205ENST00000480835 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.87
SNRNP200-205ENST00000480835 KRTAP4-2Q9BYR5 136 aa3.32□□□□□ -1.88
SNRNP200-205ENST00000480835 MUC5ACP98088 5654 aa3.27□□□□□ -1.89
SNRNP200-205ENST00000480835 KRTAP4-12Q9BQ66 201 aa3.23□□□□□ -1.89
SNRNP200-205ENST00000480835 PRM1P04553 51 aa3.2□□□□□ -1.9
SNRNP200-205ENST00000480835 KRTAP9-9Q9BYP9 154 aa3.2□□□□□ -1.9
SNRNP200-205ENST00000480835 AHNAKQ09666 5890 aaKnown RBP3.2□□□□□ -1.9
SNRNP200-205ENST00000480835 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.13□□□□□ -1.91
SNRNP200-205ENST00000480835 MUC5BQ9HC84 5762 aaPredicted RBP3.01□□□□□ -1.93
SNRNP200-205ENST00000480835 KRTAP5-11Q6L8G4 156 aa2.96□□□□□ -1.94
SNRNP200-205ENST00000480835 KRTAP21-2Q3LI59 83 aa2.9□□□□□ -1.95
SNRNP200-205ENST00000480835 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
SNRNP200-205ENST00000480835 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
SNRNP200-205ENST00000480835 PHGR1C9JFL3 82 aa2.53□□□□□ -2
SNRNP200-205ENST00000480835 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
SNRNP200-205ENST00000480835 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
SNRNP200-205ENST00000480835 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 10.7 ms