RNA–Protein interactions for RNA: ENST00000480393.5

TNFRSF25-213, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-213ENST00000480393 SPRR2FQ96RM1 72 aa9.72□□□□□ -0.85
TNFRSF25-213ENST00000480393 SYNE2Q8WXH0 6885 aaKnown RBP9.71□□□□□ -0.86
TNFRSF25-213ENST00000480393 KRTAP9-7A8MTY7 169 aa9.7□□□□□ -0.86
TNFRSF25-213ENST00000480393 KRTAP4-7Q9BYR0 210 aa9.62□□□□□ -0.87
TNFRSF25-213ENST00000480393 KRTAP19-3Q7Z4W3 81 aa9.6□□□□□ -0.87
TNFRSF25-213ENST00000480393 KRTAP6-3Q3LI67 103 aa9.54□□□□□ -0.88
TNFRSF25-213ENST00000480393 MT1GP13640 62 aa9.52□□□□□ -0.89
TNFRSF25-213ENST00000480393 MUC12Q9UKN1 5478 aa9.5□□□□□ -0.89
TNFRSF25-213ENST00000480393 KRTAP5-9P26371 169 aa9.44□□□□□ -0.9
TNFRSF25-213ENST00000480393 MT1MQ8N339 61 aa9.44□□□□□ -0.9
TNFRSF25-213ENST00000480393 LCE5AQ5TCM9 118 aa9.37□□□□□ -0.91
TNFRSF25-213ENST00000480393 KRTAP9-6A8MVA2 160 aa9.34□□□□□ -0.91
TNFRSF25-213ENST00000480393 KRTAP4-3Q9BYR4 195 aa9.29□□□□□ -0.92
TNFRSF25-213ENST00000480393 LCE1AQ5T7P2 110 aa9.2□□□□□ -0.94
TNFRSF25-213ENST00000480393 SPRR2EP22531 72 aa9.17□□□□□ -0.94
TNFRSF25-213ENST00000480393 SPRR2BP35325 72 aa9.17□□□□□ -0.94
TNFRSF25-213ENST00000480393 SPRR2AP35326 72 aa9.17□□□□□ -0.94
TNFRSF25-213ENST00000480393 H3BS24 57 aa9.14□□□□□ -0.95
TNFRSF25-213ENST00000480393 MDN1Q9NU22 5596 aa9.07□□□□□ -0.96
TNFRSF25-213ENST00000480393 LOC100996750A0A140TA64 210 aa9.02□□□□□ -0.97
TNFRSF25-213ENST00000480393 NEBP20929 6669 aa9□□□□□ -0.97
TNFRSF25-213ENST00000480393 SPRR2DP22532 72 aa8.83□□□□□ -1
TNFRSF25-213ENST00000480393 A0A0A0MQY5 61 aa8.82□□□□□ -1
TNFRSF25-213ENST00000480393 KRTAP2-3P0C7H8 128 aa8.73□□□□□ -1.01
TNFRSF25-213ENST00000480393 KRTAP2-4Q9BYR9 128 aa8.73□□□□□ -1.01
TNFRSF25-213ENST00000480393 KRTAP2-1Q9BYU5 128 aa8.73□□□□□ -1.01
TNFRSF25-213ENST00000480393 DSTQ03001 7570 aaKnown RBP8.69□□□□□ -1.02
TNFRSF25-213ENST00000480393 KRTAP20-1Q3LI63 56 aa8.57□□□□□ -1.04
TNFRSF25-213ENST00000480393 KRTAP5-5Q701N2 237 aaPredicted RBP8.44□□□□□ -1.06
TNFRSF25-213ENST00000480393 LCE3BQ5TA77 95 aa8.43□□□□□ -1.06
TNFRSF25-213ENST00000480393 MT1AP04731 61 aa8.38□□□□□ -1.07
TNFRSF25-213ENST00000480393 KRTAP6-1Q3LI64 71 aa8.32□□□□□ -1.08
TNFRSF25-213ENST00000480393 KRTAP2-2Q9BYT5 123 aa8.27□□□□□ -1.09
TNFRSF25-213ENST00000480393 INE1O15225 51 aa8.17□□□□□ -1.1
TNFRSF25-213ENST00000480393 KRTAP9-4Q9BYQ2 154 aa7.94□□□□□ -1.14
TNFRSF25-213ENST00000480393 KRTAP5-4Q6L8H1 288 aa7.93□□□□□ -1.14
TNFRSF25-213ENST00000480393 SYNE1Q8NF91 8797 aaKnown RBP7.91□□□□□ -1.14
TNFRSF25-213ENST00000480393 KRTAP12-4P60329 112 aa7.83□□□□□ -1.16
TNFRSF25-213ENST00000480393 LCE4AQ5TA78 99 aa7.78□□□□□ -1.16
TNFRSF25-213ENST00000480393 KRTAP4-9Q9BYQ8 210 aa7.75□□□□□ -1.17
TNFRSF25-213ENST00000480393 MT4P47944 62 aa7.66□□□□□ -1.18
TNFRSF25-213ENST00000480393 KRTAP6-2Q3LI66 62 aa7.64□□□□□ -1.19
TNFRSF25-213ENST00000480393 MT3P25713 68 aa7.59□□□□□ -1.19
TNFRSF25-213ENST00000480393 KRTAP4-6Q9BYQ5 205 aa7.58□□□□□ -1.2
TNFRSF25-213ENST00000480393 LCE1DQ5T752 114 aa7.52□□□□□ -1.2
TNFRSF25-213ENST00000480393 LCE3DQ9BYE3 92 aa7.49□□□□□ -1.21
TNFRSF25-213ENST00000480393 KRTAP20-2Q3LI61 65 aa7.46□□□□□ -1.22
TNFRSF25-213ENST00000480393 HMCN1Q96RW7 5635 aa7.36□□□□□ -1.23
TNFRSF25-213ENST00000480393 LCE3EQ5T5B0 92 aa7.3□□□□□ -1.24
TNFRSF25-213ENST00000480393 KRTAP5-2Q701N4 177 aa7.24□□□□□ -1.25
TNFRSF25-213ENST00000480393 KRTAP5-3Q6L8H2 238 aa7.13□□□□□ -1.27
TNFRSF25-213ENST00000480393 AHNAK2Q8IVF2 5795 aa6.83□□□□□ -1.32
TNFRSF25-213ENST00000480393 OBSCNQ5VST9 7968 aa6.81□□□□□ -1.32
TNFRSF25-213ENST00000480393 GPR98Q8WXG9 6306 aa6.76□□□□□ -1.33
TNFRSF25-213ENST00000480393 KRTAP5-10Q6L8G5 202 aa6.63□□□□□ -1.35
TNFRSF25-213ENST00000480393 PRM1P04553 51 aa6.5□□□□□ -1.37
TNFRSF25-213ENST00000480393 LCE1EQ5T753 118 aa6.49□□□□□ -1.37
TNFRSF25-213ENST00000480393 KRTAP4-11Q9BYQ6 195 aa6.42□□□□□ -1.38
TNFRSF25-213ENST00000480393 KRTAP5-7Q6L8G8 165 aa6.28□□□□□ -1.4
TNFRSF25-213ENST00000480393 KRTAP5-1Q6L8H4 278 aa6.23□□□□□ -1.41
TNFRSF25-213ENST00000480393 LCE1BQ5T7P3 118 aa6.2□□□□□ -1.42
TNFRSF25-213ENST00000480393 KRTAP5-8O75690 187 aa6.16□□□□□ -1.42
TNFRSF25-213ENST00000480393 MUC5ACP98088 5654 aa6.11□□□□□ -1.43
TNFRSF25-213ENST00000480393 LCE1CQ5T751 118 aa6.05□□□□□ -1.44
TNFRSF25-213ENST00000480393 KRTAP4-2Q9BYR5 136 aa6.05□□□□□ -1.44
TNFRSF25-213ENST00000480393 KRTAP9-9Q9BYP9 154 aa5.78□□□□□ -1.48
TNFRSF25-213ENST00000480393 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.66□□□□□ -1.5
TNFRSF25-213ENST00000480393 MUC5BQ9HC84 5762 aaPredicted RBP5.53□□□□□ -1.52
TNFRSF25-213ENST00000480393 AHNAKQ09666 5890 aaKnown RBP5.42□□□□□ -1.54
TNFRSF25-213ENST00000480393 KRTAP21-2Q3LI59 83 aa5.41□□□□□ -1.54
TNFRSF25-213ENST00000480393 KRTAP5-11Q6L8G4 156 aa5.33□□□□□ -1.56
TNFRSF25-213ENST00000480393 KRTAP4-12Q9BQ66 201 aa5.03□□□□□ -1.6
TNFRSF25-213ENST00000480393 KRTAP4-4Q9BYR3 166 aa4.86□□□□□ -1.63
TNFRSF25-213ENST00000480393 LCE1FQ5T754 118 aa4.72□□□□□ -1.65
TNFRSF25-213ENST00000480393 PHGR1C9JFL3 82 aa4.57□□□□□ -1.68
TNFRSF25-213ENST00000480393 MUC19Q7Z5P9 8384 aa3.98□□□□□ -1.77
TNFRSF25-213ENST00000480393 KRTAP21-1Q3LI58 79 aa3.97□□□□□ -1.77
TNFRSF25-213ENST00000480393 MUC16Q8WXI7 14507 aa2.99□□□□□ -1.93
Retrieved 78 of 20,778 RNA–protein pairs in 49.7 ms