RNA–Protein interactions for RNA: ENST00000480242.1

SNRNP200-203, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 3,409 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-203ENST00000480242 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.06□□□□□ -1.92
SNRNP200-203ENST00000480242 KRTAP19-5Q3LI72 72 aa3.06□□□□□ -1.92
SNRNP200-203ENST00000480242 KRTAP9-6A8MVA2 160 aa3.04□□□□□ -1.92
SNRNP200-203ENST00000480242 SYNE1Q8NF91 8797 aaKnown RBP3.02□□□□□ -1.93
SNRNP200-203ENST00000480242 FCGBPQ9Y6R7 5405 aaPredicted RBP3.01□□□□□ -1.93
SNRNP200-203ENST00000480242 MUC12Q9UKN1 5478 aa3□□□□□ -1.93
SNRNP200-203ENST00000480242 KRTAP4-7Q9BYR0 210 aa2.97□□□□□ -1.93
SNRNP200-203ENST00000480242 KRTAP2-3P0C7H8 128 aa2.97□□□□□ -1.93
SNRNP200-203ENST00000480242 KRTAP2-4Q9BYR9 128 aa2.97□□□□□ -1.93
SNRNP200-203ENST00000480242 KRTAP2-1Q9BYU5 128 aa2.97□□□□□ -1.93
SNRNP200-203ENST00000480242 KRTAP19-7Q3SYF9 63 aa2.96□□□□□ -1.94
SNRNP200-203ENST00000480242 KRTAP9-7A8MTY7 169 aa2.95□□□□□ -1.94
SNRNP200-203ENST00000480242 SPRR2FQ96RM1 72 aa2.93□□□□□ -1.94
SNRNP200-203ENST00000480242 SYNE2Q8WXH0 6885 aaKnown RBP2.91□□□□□ -1.94
SNRNP200-203ENST00000480242 MACF1Q9UPN3 7388 aaKnown RBP2.87□□□□□ -1.95
SNRNP200-203ENST00000480242 MT1EP04732 61 aa2.87□□□□□ -1.95
SNRNP200-203ENST00000480242 LCE1AQ5T7P2 110 aa2.86□□□□□ -1.95
SNRNP200-203ENST00000480242 KRTAP4-3Q9BYR4 195 aa2.83□□□□□ -1.96
SNRNP200-203ENST00000480242 KRTAP12-4P60329 112 aa2.81□□□□□ -1.96
SNRNP200-203ENST00000480242 LCE5AQ5TCM9 118 aa2.81□□□□□ -1.96
SNRNP200-203ENST00000480242 MT1LQ93083 61 aa2.78□□□□□ -1.96
SNRNP200-203ENST00000480242 MT1GP13640 62 aa2.77□□□□□ -1.97
SNRNP200-203ENST00000480242 LOC100996750A0A140TA64 210 aa2.76□□□□□ -1.97
SNRNP200-203ENST00000480242 MDN1Q9NU22 5596 aa2.75□□□□□ -1.97
SNRNP200-203ENST00000480242 KRTAP5-5Q701N2 237 aaPredicted RBP2.74□□□□□ -1.97
SNRNP200-203ENST00000480242 NEBP20929 6669 aa2.71□□□□□ -1.98
SNRNP200-203ENST00000480242 KRTAP19-3Q7Z4W3 81 aa2.71□□□□□ -1.98
SNRNP200-203ENST00000480242 SPRR2EP22531 72 aa2.68□□□□□ -1.98
SNRNP200-203ENST00000480242 SPRR2BP35325 72 aa2.68□□□□□ -1.98
SNRNP200-203ENST00000480242 SPRR2AP35326 72 aa2.68□□□□□ -1.98
SNRNP200-203ENST00000480242 KRTAP2-2Q9BYT5 123 aa2.68□□□□□ -1.98
SNRNP200-203ENST00000480242 KRTAP20-1Q3LI63 56 aa2.66□□□□□ -1.98
SNRNP200-203ENST00000480242 MT1MQ8N339 61 aa2.66□□□□□ -1.98
SNRNP200-203ENST00000480242 KRTAP5-4Q6L8H1 288 aa2.65□□□□□ -1.99
SNRNP200-203ENST00000480242 KRTAP4-9Q9BYQ8 210 aa2.61□□□□□ -1.99
SNRNP200-203ENST00000480242 LCE3BQ5TA77 95 aa2.59□□□□□ -1.99
SNRNP200-203ENST00000480242 SPRR2DP22532 72 aa2.59□□□□□ -1.99
SNRNP200-203ENST00000480242 PRM1P04553 51 aa2.54□□□□□ -2
SNRNP200-203ENST00000480242 LCE4AQ5TA78 99 aa2.51□□□□□ -2.01
SNRNP200-203ENST00000480242 LCE3DQ9BYE3 92 aa2.46□□□□□ -2.02
SNRNP200-203ENST00000480242 LCE3EQ5T5B0 92 aa2.45□□□□□ -2.02
SNRNP200-203ENST00000480242 KRTAP5-2Q701N4 177 aa2.45□□□□□ -2.02
SNRNP200-203ENST00000480242 MT1AP04731 61 aa2.41□□□□□ -2.02
SNRNP200-203ENST00000480242 KRTAP6-1Q3LI64 71 aa2.4□□□□□ -2.03
SNRNP200-203ENST00000480242 MT4P47944 62 aa2.39□□□□□ -2.03
SNRNP200-203ENST00000480242 LCE1EQ5T753 118 aa2.39□□□□□ -2.03
SNRNP200-203ENST00000480242 KRTAP6-2Q3LI66 62 aa2.33□□□□□ -2.04
SNRNP200-203ENST00000480242 KRTAP5-3Q6L8H2 238 aa2.33□□□□□ -2.04
SNRNP200-203ENST00000480242 LCE1DQ5T752 114 aa2.31□□□□□ -2.04
SNRNP200-203ENST00000480242 KRTAP9-4Q9BYQ2 154 aa2.29□□□□□ -2.04
SNRNP200-203ENST00000480242 LCE1FQ5T754 118 aa2.24□□□□□ -2.05
SNRNP200-203ENST00000480242 KRTAP20-2Q3LI61 65 aa2.21□□□□□ -2.06
SNRNP200-203ENST00000480242 KRTAP4-6Q9BYQ5 205 aa2.21□□□□□ -2.06
SNRNP200-203ENST00000480242 KRTAP5-7Q6L8G8 165 aa2.2□□□□□ -2.06
SNRNP200-203ENST00000480242 MT3P25713 68 aa2.17□□□□□ -2.06
SNRNP200-203ENST00000480242 KRTAP5-10Q6L8G5 202 aa2.13□□□□□ -2.07
SNRNP200-203ENST00000480242 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
SNRNP200-203ENST00000480242 HMCN1Q96RW7 5635 aa2.08□□□□□ -2.08
SNRNP200-203ENST00000480242 LCE1BQ5T7P3 118 aa2.07□□□□□ -2.08
SNRNP200-203ENST00000480242 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
SNRNP200-203ENST00000480242 AHNAK2Q8IVF2 5795 aa2.06□□□□□ -2.08
SNRNP200-203ENST00000480242 KRTAP5-6Q6L8G9 129 aaPredicted RBP2□□□□□ -2.09
SNRNP200-203ENST00000480242 MUC5ACP98088 5654 aa2□□□□□ -2.09
SNRNP200-203ENST00000480242 KRTAP5-1Q6L8H4 278 aa1.99□□□□□ -2.09
SNRNP200-203ENST00000480242 KRTAP4-11Q9BYQ6 195 aa1.96□□□□□ -2.1
SNRNP200-203ENST00000480242 GPR98Q8WXG9 6306 aa1.94□□□□□ -2.1
SNRNP200-203ENST00000480242 LCE1CQ5T751 118 aa1.92□□□□□ -2.1
SNRNP200-203ENST00000480242 KRTAP4-2Q9BYR5 136 aa1.87□□□□□ -2.11
SNRNP200-203ENST00000480242 MUC5BQ9HC84 5762 aaPredicted RBP1.86□□□□□ -2.11
SNRNP200-203ENST00000480242 KRTAP4-12Q9BQ66 201 aa1.86□□□□□ -2.11
SNRNP200-203ENST00000480242 KRTAP9-9Q9BYP9 154 aa1.78□□□□□ -2.12
SNRNP200-203ENST00000480242 AHNAKQ09666 5890 aaKnown RBP1.76□□□□□ -2.13
SNRNP200-203ENST00000480242 KRTAP5-11Q6L8G4 156 aa1.73□□□□□ -2.13
SNRNP200-203ENST00000480242 KRTAP4-4Q9BYR3 166 aa1.69□□□□□ -2.14
SNRNP200-203ENST00000480242 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
SNRNP200-203ENST00000480242 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
SNRNP200-203ENST00000480242 PHGR1C9JFL3 82 aa1.45□□□□□ -2.18
SNRNP200-203ENST00000480242 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 73.6 ms