RNA–Protein interactions for RNA: ENST00000480191.1

GTF3C6-202, Transcript of general transcription factor IIIC subunit 6, humanhuman

TSL 3

Gene GTF3C6, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-202ENST00000480191 ROMO1P60602 79 aa2.66□□□□□ -1.98
GTF3C6-202ENST00000480191 KRTAP12-2P59991 146 aa2.65□□□□□ -1.99
GTF3C6-202ENST00000480191 KRTAP5-8O75690 187 aa2.64□□□□□ -1.99
GTF3C6-202ENST00000480191 KRTAP10-10P60014 251 aa2.63□□□□□ -1.99
GTF3C6-202ENST00000480191 SPRR2GQ9BYE4 73 aa2.63□□□□□ -1.99
GTF3C6-202ENST00000480191 MT2AP02795 61 aa2.61□□□□□ -1.99
GTF3C6-202ENST00000480191 FAT4Q6V0I7 4981 aa2.6□□□□□ -1.99
GTF3C6-202ENST00000480191 PLAC4Q8WY50 150 aa2.6□□□□□ -1.99
GTF3C6-202ENST00000480191 LCE3EQ5T5B0 92 aa2.59□□□□□ -1.99
GTF3C6-202ENST00000480191 MT1FP04733 61 aa2.58□□□□□ -2
GTF3C6-202ENST00000480191 KRTAP25-1Q3LHN0 102 aa2.55□□□□□ -2
GTF3C6-202ENST00000480191 KRTAP19-8Q3LI54 63 aa2.55□□□□□ -2
GTF3C6-202ENST00000480191 FSIP2Q5CZC0 6907 aa2.52□□□□□ -2.01
GTF3C6-202ENST00000480191 C10orf95Q9H7T3 257 aa2.51□□□□□ -2.01
GTF3C6-202ENST00000480191 TNP1P09430 55 aa2.5□□□□□ -2.01
GTF3C6-202ENST00000480191 PP632Q6XCG6 107 aa2.5□□□□□ -2.01
GTF3C6-202ENST00000480191 PRO2289Q9P1D8 64 aa2.49□□□□□ -2.01
GTF3C6-202ENST00000480191 MT1BP07438 61 aa2.46□□□□□ -2.02
GTF3C6-202ENST00000480191 LCE3AQ5TA76 89 aa2.45□□□□□ -2.02
GTF3C6-202ENST00000480191 SPRR5A0A1B0GTR4 108 aa2.44□□□□□ -2.02
GTF3C6-202ENST00000480191 MT1XP80297 61 aa2.4□□□□□ -2.03
GTF3C6-202ENST00000480191 CRCT1Q9UGL9 99 aa2.38□□□□□ -2.03
GTF3C6-202ENST00000480191 KRTAP19-6Q3LI70 58 aa2.31□□□□□ -2.04
GTF3C6-202ENST00000480191 KRTAP8-1Q8IUC2 63 aa2.31□□□□□ -2.04
GTF3C6-202ENST00000480191 USH2AO75445 5202 aa2.28□□□□□ -2.04
GTF3C6-202ENST00000480191 KRTAP5-5Q701N2 237 aaPredicted RBP2.28□□□□□ -2.04
GTF3C6-202ENST00000480191 SSPOA2VEC9 5147 aa2.26□□□□□ -2.05
GTF3C6-202ENST00000480191 KRTAP12-3P60328 96 aa2.25□□□□□ -2.05
GTF3C6-202ENST00000480191 SYNE2Q8WXH0 6885 aaKnown RBP2.25□□□□□ -2.05
GTF3C6-202ENST00000480191 LCE3DQ9BYE3 92 aa2.24□□□□□ -2.05
GTF3C6-202ENST00000480191 FCGBPQ9Y6R7 5405 aaPredicted RBP2.22□□□□□ -2.05
GTF3C6-202ENST00000480191 LCE1CQ5T751 118 aa2.19□□□□□ -2.06
GTF3C6-202ENST00000480191 LCE1BQ5T7P3 118 aa2.19□□□□□ -2.06
GTF3C6-202ENST00000480191 MACF1Q9UPN3 7388 aaKnown RBP2.18□□□□□ -2.06
GTF3C6-202ENST00000480191 KRTAP19-5Q3LI72 72 aa2.18□□□□□ -2.06
GTF3C6-202ENST00000480191 KRTAP19-7Q3SYF9 63 aa2.13□□□□□ -2.07
GTF3C6-202ENST00000480191 NEBP20929 6669 aa2.13□□□□□ -2.07
GTF3C6-202ENST00000480191 MT1EP04732 61 aa2.11□□□□□ -2.07
GTF3C6-202ENST00000480191 MUC12Q9UKN1 5478 aa2.1□□□□□ -2.07
GTF3C6-202ENST00000480191 MT1LQ93083 61 aa2.08□□□□□ -2.08
GTF3C6-202ENST00000480191 KMT2DO14686 5537 aa2.07□□□□□ -2.08
GTF3C6-202ENST00000480191 MT1GP13640 62 aa2.04□□□□□ -2.08
GTF3C6-202ENST00000480191 KRTAP19-3Q7Z4W3 81 aa2.04□□□□□ -2.08
GTF3C6-202ENST00000480191 SPRR2FQ96RM1 72 aa2.04□□□□□ -2.08
GTF3C6-202ENST00000480191 KRTAP6-3Q3LI67 103 aa2.02□□□□□ -2.09
GTF3C6-202ENST00000480191 MDN1Q9NU22 5596 aa2.01□□□□□ -2.09
GTF3C6-202ENST00000480191 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
GTF3C6-202ENST00000480191 MT1MQ8N339 61 aa1.98□□□□□ -2.09
GTF3C6-202ENST00000480191 HMCN1Q96RW7 5635 aa1.97□□□□□ -2.09
GTF3C6-202ENST00000480191 SPRR2EP22531 72 aa1.96□□□□□ -2.1
GTF3C6-202ENST00000480191 SPRR2BP35325 72 aa1.96□□□□□ -2.1
GTF3C6-202ENST00000480191 SPRR2AP35326 72 aa1.96□□□□□ -2.1
GTF3C6-202ENST00000480191 KRTAP20-1Q3LI63 56 aa1.95□□□□□ -2.1
GTF3C6-202ENST00000480191 GPR98Q8WXG9 6306 aa1.93□□□□□ -2.1
GTF3C6-202ENST00000480191 SPRR2DP22532 72 aa1.89□□□□□ -2.11
GTF3C6-202ENST00000480191 KRTAP2-3P0C7H8 128 aa1.85□□□□□ -2.11
GTF3C6-202ENST00000480191 KRTAP2-4Q9BYR9 128 aa1.85□□□□□ -2.11
GTF3C6-202ENST00000480191 KRTAP2-1Q9BYU5 128 aa1.85□□□□□ -2.11
GTF3C6-202ENST00000480191 INE1O15225 51 aa1.81□□□□□ -2.12
GTF3C6-202ENST00000480191 MT1AP04731 61 aa1.79□□□□□ -2.12
GTF3C6-202ENST00000480191 DSTQ03001 7570 aaKnown RBP1.79□□□□□ -2.12
GTF3C6-202ENST00000480191 KRTAP5-7Q6L8G8 165 aa1.78□□□□□ -2.12
GTF3C6-202ENST00000480191 KRTAP12-4P60329 112 aa1.73□□□□□ -2.13
GTF3C6-202ENST00000480191 KRTAP6-1Q3LI64 71 aa1.73□□□□□ -2.13
GTF3C6-202ENST00000480191 AHNAK2Q8IVF2 5795 aa1.68□□□□□ -2.14
GTF3C6-202ENST00000480191 MT4P47944 62 aa1.63□□□□□ -2.15
GTF3C6-202ENST00000480191 KRTAP21-2Q3LI59 83 aa1.63□□□□□ -2.15
GTF3C6-202ENST00000480191 SYNE1Q8NF91 8797 aaKnown RBP1.6□□□□□ -2.15
GTF3C6-202ENST00000480191 KRTAP6-2Q3LI66 62 aa1.59□□□□□ -2.15
GTF3C6-202ENST00000480191 KRTAP20-2Q3LI61 65 aa1.57□□□□□ -2.16
GTF3C6-202ENST00000480191 KRTAP5-10Q6L8G5 202 aa1.57□□□□□ -2.16
GTF3C6-202ENST00000480191 AHNAKQ09666 5890 aaKnown RBP1.45□□□□□ -2.18
GTF3C6-202ENST00000480191 MUC5BQ9HC84 5762 aaPredicted RBP1.4□□□□□ -2.19
GTF3C6-202ENST00000480191 MUC5ACP98088 5654 aa1.38□□□□□ -2.19
GTF3C6-202ENST00000480191 PRM1P04553 51 aa1.35□□□□□ -2.19
GTF3C6-202ENST00000480191 PHGR1C9JFL3 82 aa0.98□□□□□ -2.25
GTF3C6-202ENST00000480191 KRTAP21-1Q3LI58 79 aa0.85□□□□□ -2.27
GTF3C6-202ENST00000480191 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 59 ms