RNA–Protein interactions for RNA: ENST00000480191.1

GTF3C6-202, Transcript of general transcription factor IIIC subunit 6, humanhuman

TSL 3

Gene GTF3C6, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-202ENST00000480191 AEBP2Q6ZN18 517 aaPredicted RBP20.55■□□□□ 0.88
GTF3C6-202ENST00000480191 CHIC1Q5VXU3 224 aa19.1■□□□□ 0.65
GTF3C6-202ENST00000480191 SENP3Q9H4L4 574 aaPredicted RBP17.59■□□□□ 0.41
GTF3C6-202ENST00000480191 PHF23Q9BUL5 403 aaPredicted RBP17.26■□□□□ 0.35
GTF3C6-202ENST00000480191 POTEDQ86YR6 584 aa16.94■□□□□ 0.3
GTF3C6-202ENST00000480191 FOXD1Q16676 465 aa16.55■□□□□ 0.24
GTF3C6-202ENST00000480191 MSH5O43196 834 aa15.76■□□□□ 0.11
GTF3C6-202ENST00000480191 PIAS4Q8N2W9 510 aaPredicted RBP15.23■□□□□ 0.03
GTF3C6-202ENST00000480191 PPP6R1Q9UPN7 881 aa14.83□□□□□ -0.04
GTF3C6-202ENST00000480191 ADRA2BP18089 450 aa14.72□□□□□ -0.05
GTF3C6-202ENST00000480191 PLPPR3Q6T4P5 718 aa14.44□□□□□ -0.1
GTF3C6-202ENST00000480191 CACNB1Q02641 598 aaPredicted RBP14.08□□□□□ -0.16
GTF3C6-202ENST00000480191 DMRT2Q9Y5R5 561 aa13.83□□□□□ -0.2
GTF3C6-202ENST00000480191 MAPK8IP2Q13387 824 aaPredicted RBP13.79□□□□□ -0.2
GTF3C6-202ENST00000480191 RNF39Q9H2S5 420 aa13.41□□□□□ -0.26
GTF3C6-202ENST00000480191 SCAF1Q9H7N4 1312 aaKnown RBP13.38□□□□□ -0.27
GTF3C6-202ENST00000480191 DCAF8L1A6NGE4 600 aa13.3□□□□□ -0.28
GTF3C6-202ENST00000480191 C1QBPQ07021 282 aaKnown RBP13.12□□□□□ -0.31
GTF3C6-202ENST00000480191 NISCHQ9Y2I1 1504 aa13.12□□□□□ -0.31
GTF3C6-202ENST00000480191 POTEHQ6S545 545 aa13.09□□□□□ -0.31
GTF3C6-202ENST00000480191 HOXD11P31277 338 aaPredicted RBP12.98□□□□□ -0.33
GTF3C6-202ENST00000480191 KCNA4P22459 653 aa12.92□□□□□ -0.34
GTF3C6-202ENST00000480191 EHMT2Q96KQ7 1210 aa12.73□□□□□ -0.37
GTF3C6-202ENST00000480191 DNAJC5BQ9UF47 199 aa12.66□□□□□ -0.38
GTF3C6-202ENST00000480191 RNF216Q9NWF9 866 aaPredicted RBP12.63□□□□□ -0.39
GTF3C6-202ENST00000480191 PPP4R3CPQ6ZMV5 832 aa12.57□□□□□ -0.4
GTF3C6-202ENST00000480191 CNKSR2Q8WXI2 1034 aa12.52□□□□□ -0.41
GTF3C6-202ENST00000480191 SLC4A1APQ9BWU0 796 aaKnown RBP12.43□□□□□ -0.42
GTF3C6-202ENST00000480191 NCBP3Q53F19 620 aaKnown RBP12.42□□□□□ -0.42
GTF3C6-202ENST00000480191 CSRNP3Q8WYN3 585 aa12.34□□□□□ -0.43
GTF3C6-202ENST00000480191 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.34□□□□□ -0.435e-7■■■□□ 15.8
GTF3C6-202ENST00000480191 DSG3P32926 999 aa12.27□□□□□ -0.45
GTF3C6-202ENST00000480191 NPM3O75607 178 aaKnown RBP12.21□□□□□ -0.45
GTF3C6-202ENST00000480191 SPINK5Q9NQ38 1064 aaPredicted RBP12.13□□□□□ -0.47
GTF3C6-202ENST00000480191 CAPN15O75808 1086 aa12.11□□□□□ -0.47
GTF3C6-202ENST00000480191 U3KPZ7 1027 aaPredicted RBP12.03□□□□□ -0.48
GTF3C6-202ENST00000480191 ZBTB22O15209 634 aa11.9□□□□□ -0.5
GTF3C6-202ENST00000480191 SP7Q8TDD2 431 aaPredicted RBP11.85□□□□□ -0.51
GTF3C6-202ENST00000480191 CHRDL2Q6WN34 429 aa11.81□□□□□ -0.52
GTF3C6-202ENST00000480191 ABCB7O75027 752 aa11.78□□□□□ -0.52
GTF3C6-202ENST00000480191 FOXD4L1Q9NU39 408 aa11.76□□□□□ -0.53
GTF3C6-202ENST00000480191 TRHP20396 242 aaPredicted RBP11.71□□□□□ -0.53
GTF3C6-202ENST00000480191 RBM42Q9BTD8 480 aaKnown RBP11.67□□□□□ -0.54
GTF3C6-202ENST00000480191 ZNF219Q9P2Y4 722 aaPredicted RBP11.62□□□□□ -0.55
GTF3C6-202ENST00000480191 CCDC180Q9P1Z9 1646 aa11.52□□□□□ -0.57
GTF3C6-202ENST00000480191 APLP2Q06481 763 aa11.5□□□□□ -0.57
GTF3C6-202ENST00000480191 SLC4A2P04920 1241 aa11.39□□□□□ -0.59
GTF3C6-202ENST00000480191 HAX1O00165 279 aa11.36□□□□□ -0.59
GTF3C6-202ENST00000480191 PIP4P2Q8N4L2 257 aa11.36□□□□□ -0.59
GTF3C6-202ENST00000480191 ATXN8OSP0DMR3 200 aa11.32□□□□□ -0.6
GTF3C6-202ENST00000480191 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.29□□□□□ -0.6
GTF3C6-202ENST00000480191 MYCNP04198 464 aaPredicted RBP11.29□□□□□ -0.6
GTF3C6-202ENST00000480191 HNRNPUL2Q1KMD3 747 aaKnown RBP11.29□□□□□ -0.6
GTF3C6-202ENST00000480191 AMER1Q5JTC6 1135 aaPredicted RBP11.24□□□□□ -0.61
GTF3C6-202ENST00000480191 AKT1S1Q96B36 256 aa11.24□□□□□ -0.61
GTF3C6-202ENST00000480191 EVX2Q03828 476 aa11.22□□□□□ -0.61
GTF3C6-202ENST00000480191 POLA2Q14181 598 aa11.2□□□□□ -0.62
GTF3C6-202ENST00000480191 SAMD1Q6SPF0 538 aaPredicted RBP11.2□□□□□ -0.62
GTF3C6-202ENST00000480191 RTN4Q9NQC3 1192 aaKnown RBP11.17□□□□□ -0.62
GTF3C6-202ENST00000480191 REM2Q8IYK8 340 aaPredicted RBP11.16□□□□□ -0.62
GTF3C6-202ENST00000480191 PLSCR2Q9NRY7 297 aa11.14□□□□□ -0.63
GTF3C6-202ENST00000480191 FXR2P51116 673 aaKnown RBP eCLIP11.13□□□□□ -0.63
GTF3C6-202ENST00000480191 SLC24A1O60721 1099 aa11.11□□□□□ -0.63
GTF3C6-202ENST00000480191 FKBP8Q14318 412 aa11.11□□□□□ -0.63
GTF3C6-202ENST00000480191 LHX8Q68G74 356 aa11.1□□□□□ -0.63
GTF3C6-202ENST00000480191 PITPNM1O00562 1244 aa11.07□□□□□ -0.64
GTF3C6-202ENST00000480191 ZCCHC6Q5VYS8 1495 aaKnown RBP11.04□□□□□ -0.64
GTF3C6-202ENST00000480191 DCAF1Q9Y4B6 1507 aa10.93□□□□□ -0.66
GTF3C6-202ENST00000480191 ATF5Q9Y2D1 282 aaPredicted RBP10.9□□□□□ -0.66
GTF3C6-202ENST00000480191 OSCARQ8IYS5 282 aa10.89□□□□□ -0.67
GTF3C6-202ENST00000480191 GABBR2O75899 941 aa10.88□□□□□ -0.67
GTF3C6-202ENST00000480191 ZBTB12Q9Y330 459 aaPredicted RBP10.84□□□□□ -0.67
GTF3C6-202ENST00000480191 C19orf67A6NJJ6 358 aa10.81□□□□□ -0.68
GTF3C6-202ENST00000480191 MYO15BQ96JP2 1530 aa10.79□□□□□ -0.68
GTF3C6-202ENST00000480191 PRKAR2AP13861 404 aaKnown RBP10.76□□□□□ -0.69
GTF3C6-202ENST00000480191 DCAF8L2P0C7V8 631 aa10.7□□□□□ -0.7
GTF3C6-202ENST00000480191 NACADO15069 1562 aa10.69□□□□□ -0.7
GTF3C6-202ENST00000480191 POTEIP0CG38 1075 aa10.68□□□□□ -0.7
GTF3C6-202ENST00000480191 ABCC9O60706 1549 aa10.68□□□□□ -0.7
GTF3C6-202ENST00000480191 SHROOM4Q9ULL8 1493 aa10.6□□□□□ -0.71
GTF3C6-202ENST00000480191 FBXO3Q9UK99 471 aa10.59□□□□□ -0.71
GTF3C6-202ENST00000480191 RB1CC1Q8TDY2 1594 aa10.58□□□□□ -0.72
GTF3C6-202ENST00000480191 CLEC11AQ9Y240 323 aa10.55□□□□□ -0.72
GTF3C6-202ENST00000480191 SPDYE4A6NLX3 237 aa10.54□□□□□ -0.72
GTF3C6-202ENST00000480191 POTEMA6NI47 508 aa10.51□□□□□ -0.73
GTF3C6-202ENST00000480191 PROM2Q8N271 834 aa10.49□□□□□ -0.73
GTF3C6-202ENST00000480191 CHADLQ6NUI6 762 aa10.48□□□□□ -0.73
GTF3C6-202ENST00000480191 SPDYE1Q8NFV5 336 aaPredicted RBP10.48□□□□□ -0.73
GTF3C6-202ENST00000480191 SCRIBQ14160 1630 aa10.47□□□□□ -0.73
GTF3C6-202ENST00000480191 MKRN4PQ13434 485 aaPredicted RBP10.47□□□□□ -0.73
GTF3C6-202ENST00000480191 SPDYE2BA6NHP3 402 aa10.46□□□□□ -0.73
GTF3C6-202ENST00000480191 SPDYE6P0CI01 402 aa10.46□□□□□ -0.73
GTF3C6-202ENST00000480191 SPDYE2Q495Y8 402 aa10.46□□□□□ -0.73
GTF3C6-202ENST00000480191 POTEGQ6S5H5 508 aa10.45□□□□□ -0.74
GTF3C6-202ENST00000480191 FBLN2P98095 1184 aa10.44□□□□□ -0.74
GTF3C6-202ENST00000480191 OTUD5Q96G74 571 aa10.42□□□□□ -0.74
GTF3C6-202ENST00000480191 VASPP50552 380 aaPredicted RBP10.4□□□□□ -0.74
GTF3C6-202ENST00000480191 CD44P16070 742 aaKnown RBP10.36□□□□□ -0.75
GTF3C6-202ENST00000480191 DCBLD2Q96PD2 775 aa10.35□□□□□ -0.75
GTF3C6-202ENST00000480191 PLCB2Q00722 1185 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 181 ms