RNA–Protein interactions for RNA: ENST00000479412.2

NOTCH2-203, Transcript of notch 2, humanhuman

TSL 1 (best)

Gene NOTCH2, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH2-203ENST00000479412 MDN1Q9NU22 5596 aa4.8□□□□□ -1.64
NOTCH2-203ENST00000479412 KRTAP9-2Q9BYQ4 174 aa4.78□□□□□ -1.64
NOTCH2-203ENST00000479412 KRTAP2-3P0C7H8 128 aa4.74□□□□□ -1.65
NOTCH2-203ENST00000479412 KRTAP2-4Q9BYR9 128 aa4.74□□□□□ -1.65
NOTCH2-203ENST00000479412 KRTAP2-1Q9BYU5 128 aa4.74□□□□□ -1.65
NOTCH2-203ENST00000479412 KRTAP4-3Q9BYR4 195 aa4.74□□□□□ -1.65
NOTCH2-203ENST00000479412 MT1EP04732 61 aa4.72□□□□□ -1.65
NOTCH2-203ENST00000479412 CRCT1Q9UGL9 99 aa4.72□□□□□ -1.65
NOTCH2-203ENST00000479412 LCE2DQ5TA82 110 aaPredicted RBP4.7□□□□□ -1.66
NOTCH2-203ENST00000479412 SPRR2FQ96RM1 72 aa4.7□□□□□ -1.66
NOTCH2-203ENST00000479412 MT1LQ93083 61 aa4.68□□□□□ -1.66
NOTCH2-203ENST00000479412 SYNE1Q8NF91 8797 aaKnown RBP4.66□□□□□ -1.66
NOTCH2-203ENST00000479412 OBSCNQ5VST9 7968 aa4.65□□□□□ -1.67
NOTCH2-203ENST00000479412 LOC100996750A0A140TA64 210 aa4.63□□□□□ -1.67
NOTCH2-203ENST00000479412 KRTAP12-4P60329 112 aa4.62□□□□□ -1.67
NOTCH2-203ENST00000479412 MT1GP13640 62 aa4.55□□□□□ -1.68
NOTCH2-203ENST00000479412 KRTAP19-3Q7Z4W3 81 aa4.48□□□□□ -1.69
NOTCH2-203ENST00000479412 MT1MQ8N339 61 aa4.46□□□□□ -1.7
NOTCH2-203ENST00000479412 KRTAP4-9Q9BYQ8 210 aa4.33□□□□□ -1.72
NOTCH2-203ENST00000479412 LCE5AQ5TCM9 118 aa4.33□□□□□ -1.72
NOTCH2-203ENST00000479412 SPRR2EP22531 72 aa4.33□□□□□ -1.72
NOTCH2-203ENST00000479412 SPRR2BP35325 72 aa4.33□□□□□ -1.72
NOTCH2-203ENST00000479412 SPRR2AP35326 72 aa4.33□□□□□ -1.72
NOTCH2-203ENST00000479412 LCE1AQ5T7P2 110 aa4.27□□□□□ -1.73
NOTCH2-203ENST00000479412 LCE3BQ5TA77 95 aa4.27□□□□□ -1.73
NOTCH2-203ENST00000479412 KRTAP9-6A0A140TA67 174 aa4.23□□□□□ -1.73
NOTCH2-203ENST00000479412 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.23□□□□□ -1.73
NOTCH2-203ENST00000479412 KRTAP9-7A8MTY7 169 aa4.17□□□□□ -1.74
NOTCH2-203ENST00000479412 PRM1P04553 51 aa4.16□□□□□ -1.74
NOTCH2-203ENST00000479412 KRTAP5-9P26371 169 aa4.15□□□□□ -1.74
NOTCH2-203ENST00000479412 SPRR2DP22532 72 aa4.12□□□□□ -1.75
NOTCH2-203ENST00000479412 KRTAP19-4Q3LI73 84 aa4.08□□□□□ -1.76
NOTCH2-203ENST00000479412 KRTAP6-1Q3LI64 71 aa4.06□□□□□ -1.76
NOTCH2-203ENST00000479412 LCE3DQ9BYE3 92 aa4.01□□□□□ -1.77
NOTCH2-203ENST00000479412 KRTAP6-3Q3LI67 103 aa3.99□□□□□ -1.77
NOTCH2-203ENST00000479412 LCE3EQ5T5B0 92 aa3.97□□□□□ -1.77
NOTCH2-203ENST00000479412 KRTAP5-5Q701N2 237 aaPredicted RBP3.93□□□□□ -1.78
NOTCH2-203ENST00000479412 NEBP20929 6669 aa3.92□□□□□ -1.78
NOTCH2-203ENST00000479412 MT1AP04731 61 aa3.86□□□□□ -1.79
NOTCH2-203ENST00000479412 MT4P47944 62 aa3.81□□□□□ -1.8
NOTCH2-203ENST00000479412 KRTAP6-2Q3LI66 62 aa3.8□□□□□ -1.8
NOTCH2-203ENST00000479412 LCE1EQ5T753 118 aa3.73□□□□□ -1.81
NOTCH2-203ENST00000479412 KRTAP4-6Q9BYQ5 205 aa3.7□□□□□ -1.82
NOTCH2-203ENST00000479412 KRTAP2-2Q9BYT5 123 aa3.7□□□□□ -1.82
NOTCH2-203ENST00000479412 HMCN1Q96RW7 5635 aa3.67□□□□□ -1.82
NOTCH2-203ENST00000479412 KRTAP9-4Q9BYQ2 154 aa3.66□□□□□ -1.82
NOTCH2-203ENST00000479412 LCE1DQ5T752 114 aa3.53□□□□□ -1.84
NOTCH2-203ENST00000479412 MT3P25713 68 aa3.52□□□□□ -1.85
NOTCH2-203ENST00000479412 KRTAP5-4Q6L8H1 288 aa3.47□□□□□ -1.85
NOTCH2-203ENST00000479412 KRTAP20-1Q3LI63 56 aa3.45□□□□□ -1.86
NOTCH2-203ENST00000479412 KRTAP20-2Q3LI61 65 aa3.43□□□□□ -1.86
NOTCH2-203ENST00000479412 MUC19Q7Z5P9 8384 aa3.35□□□□□ -1.87
NOTCH2-203ENST00000479412 LCE4AQ5TA78 99 aa3.34□□□□□ -1.87
NOTCH2-203ENST00000479412 MUC5ACP98088 5654 aa3.21□□□□□ -1.9
NOTCH2-203ENST00000479412 LCE1BQ5T7P3 118 aa3.18□□□□□ -1.9
NOTCH2-203ENST00000479412 KRTAP5-3Q6L8H2 238 aa3.18□□□□□ -1.9
NOTCH2-203ENST00000479412 KRTAP4-11Q9BYQ6 195 aa3.18□□□□□ -1.9
NOTCH2-203ENST00000479412 KRTAP5-2Q701N4 177 aa3.17□□□□□ -1.9
NOTCH2-203ENST00000479412 AHNAK2Q8IVF2 5795 aa3.02□□□□□ -1.93
NOTCH2-203ENST00000479412 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
NOTCH2-203ENST00000479412 MUC5BQ9HC84 5762 aaPredicted RBP2.93□□□□□ -1.94
NOTCH2-203ENST00000479412 KRTAP5-1Q6L8H4 278 aa2.84□□□□□ -1.95
NOTCH2-203ENST00000479412 KRTAP4-2Q9BYR5 136 aa2.8□□□□□ -1.96
NOTCH2-203ENST00000479412 KRTAP5-8O75690 187 aa2.77□□□□□ -1.97
NOTCH2-203ENST00000479412 GPR98Q8WXG9 6306 aa2.77□□□□□ -1.97
NOTCH2-203ENST00000479412 KRTAP5-10Q6L8G5 202 aa2.74□□□□□ -1.97
NOTCH2-203ENST00000479412 LCE1CQ5T751 118 aa2.68□□□□□ -1.98
NOTCH2-203ENST00000479412 KRTAP4-4Q9BYR3 166 aa2.66□□□□□ -1.98
NOTCH2-203ENST00000479412 KRTAP4-12Q9BQ66 201 aa2.66□□□□□ -1.98
NOTCH2-203ENST00000479412 KRTAP21-2Q3LI59 83 aa2.54□□□□□ -2
NOTCH2-203ENST00000479412 KRTAP9-9Q9BYP9 154 aa2.48□□□□□ -2.01
NOTCH2-203ENST00000479412 KRTAP21-1Q3LI58 79 aa2.44□□□□□ -2.02
NOTCH2-203ENST00000479412 KRTAP5-7Q6L8G8 165 aa2.44□□□□□ -2.02
NOTCH2-203ENST00000479412 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.39□□□□□ -2.03
NOTCH2-203ENST00000479412 KRTAP5-11Q6L8G4 156 aa2.32□□□□□ -2.04
NOTCH2-203ENST00000479412 AHNAKQ09666 5890 aaKnown RBP2.24□□□□□ -2.05
NOTCH2-203ENST00000479412 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
NOTCH2-203ENST00000479412 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 31.9 ms