RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 KRTAP4-12Q9BQ66 201 aa7.98□□□□□ -1.13
C9orf3-216ENST00000478603 TNP1P09430 55 aa7.97□□□□□ -1.13
C9orf3-216ENST00000478603 HMCN1Q96RW7 5635 aa7.91□□□□□ -1.14
C9orf3-216ENST00000478603 ANAPC13Q9BS18 74 aa7.88□□□□□ -1.15
C9orf3-216ENST00000478603 KRTAP5-4Q6L8H1 288 aa7.84□□□□□ -1.15
C9orf3-216ENST00000478603 KRTAP19-4Q3LI73 84 aa7.82□□□□□ -1.16
C9orf3-216ENST00000478603 PRR15LQ9BU68 103 aa7.79□□□□□ -1.16
C9orf3-216ENST00000478603 CCDC179H3BU77 68 aa7.78□□□□□ -1.16
C9orf3-216ENST00000478603 KRTAP4-7Q9BYR0 210 aa7.76□□□□□ -1.17
C9orf3-216ENST00000478603 AHNAK2Q8IVF2 5795 aa7.72□□□□□ -1.17
C9orf3-216ENST00000478603 KRTAP12-3P60328 96 aa7.71□□□□□ -1.18
C9orf3-216ENST00000478603 LINC01558Q9Y6Z2 57 aa7.7□□□□□ -1.18
C9orf3-216ENST00000478603 ATP5EP56381 51 aaPredicted RBP7.68□□□□□ -1.18
C9orf3-216ENST00000478603 KRTAP5-10Q6L8G5 202 aa7.62□□□□□ -1.19
C9orf3-216ENST00000478603 KRTAP9-9Q9BYP9 154 aa7.58□□□□□ -1.2
C9orf3-216ENST00000478603 KRTAP9-4Q9BYQ2 154 aa7.58□□□□□ -1.2
C9orf3-216ENST00000478603 UQCR11O14957 56 aa7.54□□□□□ -1.2
C9orf3-216ENST00000478603 KRTAP5-5Q701N2 237 aaPredicted RBP7.46□□□□□ -1.22
C9orf3-216ENST00000478603 KRTAP20-2Q3LI61 65 aa7.43□□□□□ -1.22
C9orf3-216ENST00000478603 TMEM258P61165 79 aa7.41□□□□□ -1.22
C9orf3-216ENST00000478603 KRTAP25-1Q3LHN0 102 aa7.41□□□□□ -1.22
C9orf3-216ENST00000478603 KRTAP5-3Q6L8H2 238 aa7.41□□□□□ -1.22
C9orf3-216ENST00000478603 MIR22HGQ0VDD5 57 aa7.37□□□□□ -1.23
C9orf3-216ENST00000478603 SPRR5A0A1B0GTR4 108 aa7.33□□□□□ -1.24
C9orf3-216ENST00000478603 KRTAP5-7Q6L8G8 165 aa7.33□□□□□ -1.24
C9orf3-216ENST00000478603 KRTAP12-4P60329 112 aa7.29□□□□□ -1.24
C9orf3-216ENST00000478603 SYNE1Q8NF91 8797 aaKnown RBP7.23□□□□□ -1.25
C9orf3-216ENST00000478603 K7ERS5 55 aa7.23□□□□□ -1.25
C9orf3-216ENST00000478603 PSPHP1O15172 72 aa7.14□□□□□ -1.27
C9orf3-216ENST00000478603 KRTAP15-1Q3LI76 137 aa7.13□□□□□ -1.27
C9orf3-216ENST00000478603 KRTAP23-1A1A580 65 aa7.09□□□□□ -1.27
C9orf3-216ENST00000478603 LCE3CQ5T5A8 94 aa7.08□□□□□ -1.28
C9orf3-216ENST00000478603 V9GYY9 64 aa7.04□□□□□ -1.28
C9orf3-216ENST00000478603 Q1T7F1 81 aa7□□□□□ -1.29
C9orf3-216ENST00000478603 MT1AP04731 61 aa6.89□□□□□ -1.31
C9orf3-216ENST00000478603 KRTAP6-1Q3LI64 71 aa6.89□□□□□ -1.31
C9orf3-216ENST00000478603 KRTAP4-11Q9BYQ6 195 aa6.87□□□□□ -1.31
C9orf3-216ENST00000478603 A6NED7 52 aa6.86□□□□□ -1.31
C9orf3-216ENST00000478603 KRTAP5-2Q701N4 177 aa6.84□□□□□ -1.31
C9orf3-216ENST00000478603 CDC42SE1Q9NRR8 79 aa6.84□□□□□ -1.31
C9orf3-216ENST00000478603 KRTAP4-2Q9BYR5 136 aa6.81□□□□□ -1.32
C9orf3-216ENST00000478603 KRTAP9-6A8MVA2 160 aa6.73□□□□□ -1.33
C9orf3-216ENST00000478603 ROMO1P60602 79 aa6.73□□□□□ -1.33
C9orf3-216ENST00000478603 RPS28P62857 69 aaKnown RBP6.71□□□□□ -1.34
C9orf3-216ENST00000478603 KRTAP5-8O75690 187 aa6.61□□□□□ -1.35
C9orf3-216ENST00000478603 KRTAP6-2Q3LI66 62 aa6.61□□□□□ -1.35
C9orf3-216ENST00000478603 OBSCNQ5VST9 7968 aa6.48□□□□□ -1.37
C9orf3-216ENST00000478603 MUC5ACP98088 5654 aa6.35□□□□□ -1.39
C9orf3-216ENST00000478603 AHNAKQ09666 5890 aaKnown RBP6.34□□□□□ -1.39
C9orf3-216ENST00000478603 MUC5BQ9HC84 5762 aaPredicted RBP6.33□□□□□ -1.4
C9orf3-216ENST00000478603 MT3P25713 68 aa6.3□□□□□ -1.4
C9orf3-216ENST00000478603 KRTAP5-1Q6L8H4 278 aa6.18□□□□□ -1.42
C9orf3-216ENST00000478603 PCP4P48539 62 aa6.07□□□□□ -1.44
C9orf3-216ENST00000478603 SVIPQ8NHG7 77 aa5.88□□□□□ -1.47
C9orf3-216ENST00000478603 LCE1EQ5T753 118 aa5.8□□□□□ -1.48
C9orf3-216ENST00000478603 BRK1Q8WUW1 75 aa5.61□□□□□ -1.51
C9orf3-216ENST00000478603 LCE1BQ5T7P3 118 aa5.55□□□□□ -1.52
C9orf3-216ENST00000478603 A0A0A0MQY5 61 aa5.41□□□□□ -1.54
C9orf3-216ENST00000478603 LCE1CQ5T751 118 aa5.4□□□□□ -1.54
C9orf3-216ENST00000478603 PMAIP1Q13794 54 aa5.23□□□□□ -1.57
C9orf3-216ENST00000478603 PRAC1Q96KF2 57 aa5.19□□□□□ -1.58
C9orf3-216ENST00000478603 LCE3DQ9BYE3 92 aa5.05□□□□□ -1.6
C9orf3-216ENST00000478603 KRTAP5-11Q6L8G4 156 aa4.91□□□□□ -1.62
C9orf3-216ENST00000478603 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.88□□□□□ -1.63
C9orf3-216ENST00000478603 LCE1FQ5T754 118 aa4.8□□□□□ -1.64
C9orf3-216ENST00000478603 LCE3EQ5T5B0 92 aa4.72□□□□□ -1.65
C9orf3-216ENST00000478603 PRO0628Q9UI54 55 aa4.54□□□□□ -1.68
C9orf3-216ENST00000478603 KRTAP21-2Q3LI59 83 aa4.53□□□□□ -1.68
C9orf3-216ENST00000478603 PHGR1C9JFL3 82 aa4.45□□□□□ -1.7
C9orf3-216ENST00000478603 KTN1-AS1Q86SY8 53 aa4.44□□□□□ -1.7
C9orf3-216ENST00000478603 NDUFAF8A1L188 74 aa4.43□□□□□ -1.7
C9orf3-216ENST00000478603 LUZP6Q538Z0 58 aa4.35□□□□□ -1.71
C9orf3-216ENST00000478603 KRTAP4-4Q9BYR3 166 aa4.23□□□□□ -1.73
C9orf3-216ENST00000478603 MUC19Q7Z5P9 8384 aa4.03□□□□□ -1.76
C9orf3-216ENST00000478603 PRM1P04553 51 aa3.46□□□□□ -1.86
C9orf3-216ENST00000478603 KRTAP21-1Q3LI58 79 aa3.35□□□□□ -1.87
C9orf3-216ENST00000478603 MUC16Q8WXI7 14507 aa2.83□□□□□ -1.96
C9orf3-216ENST00000478603 INE1O15225 51 aa2.42□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 12.4 ms