RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 KRTAP8-1Q8IUC2 63 aa2.3□□□□□ -2.04
SH3D19-207ENST00000478503 MT3P25713 68 aa2.28□□□□□ -2.04
SH3D19-207ENST00000478503 SSPOA2VEC9 5147 aa2.28□□□□□ -2.04
SH3D19-207ENST00000478503 KRTAP19-5Q3LI72 72 aa2.27□□□□□ -2.05
SH3D19-207ENST00000478503 LCE1AQ5T7P2 110 aa2.27□□□□□ -2.05
SH3D19-207ENST00000478503 LCE3EQ5T5B0 92 aa2.24□□□□□ -2.05
SH3D19-207ENST00000478503 KRTAP9-7A8MTY7 169 aa2.23□□□□□ -2.05
SH3D19-207ENST00000478503 KRTAP4-7Q9BYR0 210 aa2.22□□□□□ -2.05
SH3D19-207ENST00000478503 DSTQ03001 7570 aaKnown RBP2.22□□□□□ -2.05
SH3D19-207ENST00000478503 MUC12Q9UKN1 5478 aa2.21□□□□□ -2.06
SH3D19-207ENST00000478503 FCGBPQ9Y6R7 5405 aaPredicted RBP2.19□□□□□ -2.06
SH3D19-207ENST00000478503 CRCT1Q9UGL9 99 aa2.18□□□□□ -2.06
SH3D19-207ENST00000478503 KRTAP9-9Q9BYP9 154 aa2.18□□□□□ -2.06
SH3D19-207ENST00000478503 LCE1DQ5T752 114 aa2.16□□□□□ -2.06
SH3D19-207ENST00000478503 KRTAP9-6A8MVA2 160 aa2.14□□□□□ -2.07
SH3D19-207ENST00000478503 KRTAP19-7Q3SYF9 63 aa2.14□□□□□ -2.07
SH3D19-207ENST00000478503 LCE3DQ9BYE3 92 aa2.12□□□□□ -2.07
SH3D19-207ENST00000478503 OBSCNQ5VST9 7968 aa2.12□□□□□ -2.07
SH3D19-207ENST00000478503 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.11□□□□□ -2.07
SH3D19-207ENST00000478503 KRTAP12-4P60329 112 aa2.1□□□□□ -2.07
SH3D19-207ENST00000478503 KRTAP4-3Q9BYR4 195 aa2.09□□□□□ -2.07
SH3D19-207ENST00000478503 KRTAP6-3Q3LI67 103 aa2.09□□□□□ -2.08
SH3D19-207ENST00000478503 SYNE1Q8NF91 8797 aaKnown RBP2.08□□□□□ -2.08
SH3D19-207ENST00000478503 MT1EP04732 61 aa2.07□□□□□ -2.08
SH3D19-207ENST00000478503 MT1LQ93083 61 aa2.07□□□□□ -2.08
SH3D19-207ENST00000478503 SYNE2Q8WXH0 6885 aaKnown RBP2.06□□□□□ -2.08
SH3D19-207ENST00000478503 MACF1Q9UPN3 7388 aaKnown RBP2.06□□□□□ -2.08
SH3D19-207ENST00000478503 GPR98Q8WXG9 6306 aa2.05□□□□□ -2.08
SH3D19-207ENST00000478503 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
SH3D19-207ENST00000478503 KRTAP19-6Q3LI70 58 aa2.03□□□□□ -2.08
SH3D19-207ENST00000478503 MDN1Q9NU22 5596 aa2.02□□□□□ -2.09
SH3D19-207ENST00000478503 MT1GP13640 62 aa2.02□□□□□ -2.09
SH3D19-207ENST00000478503 SPRR2FQ96RM1 72 aa1.99□□□□□ -2.09
SH3D19-207ENST00000478503 MT1MQ8N339 61 aa1.94□□□□□ -2.1
SH3D19-207ENST00000478503 KRTAP19-3Q7Z4W3 81 aa1.94□□□□□ -2.1
SH3D19-207ENST00000478503 KRTAP4-12Q9BQ66 201 aa1.93□□□□□ -2.1
SH3D19-207ENST00000478503 KRTAP2-3P0C7H8 128 aa1.93□□□□□ -2.1
SH3D19-207ENST00000478503 KRTAP2-4Q9BYR9 128 aa1.93□□□□□ -2.1
SH3D19-207ENST00000478503 KRTAP2-1Q9BYU5 128 aa1.93□□□□□ -2.1
SH3D19-207ENST00000478503 KRTAP5-9P26371 169 aa1.92□□□□□ -2.1
SH3D19-207ENST00000478503 NEBP20929 6669 aa1.88□□□□□ -2.11
SH3D19-207ENST00000478503 LCE3BQ5TA77 95 aa1.88□□□□□ -2.11
SH3D19-207ENST00000478503 KRTAP4-9Q9BYQ8 210 aa1.88□□□□□ -2.11
SH3D19-207ENST00000478503 KRTAP5-3Q6L8H2 238 aa1.83□□□□□ -2.12
SH3D19-207ENST00000478503 KRTAP20-1Q3LI63 56 aa1.82□□□□□ -2.12
SH3D19-207ENST00000478503 PRM1P04553 51 aa1.81□□□□□ -2.12
SH3D19-207ENST00000478503 KRTAP6-1Q3LI64 71 aa1.8□□□□□ -2.12
SH3D19-207ENST00000478503 SPRR2EP22531 72 aa1.8□□□□□ -2.12
SH3D19-207ENST00000478503 SPRR2BP35325 72 aa1.8□□□□□ -2.12
SH3D19-207ENST00000478503 SPRR2AP35326 72 aa1.8□□□□□ -2.12
SH3D19-207ENST00000478503 KRTAP4-2Q9BYR5 136 aa1.76□□□□□ -2.13
SH3D19-207ENST00000478503 HMCN1Q96RW7 5635 aa1.75□□□□□ -2.13
SH3D19-207ENST00000478503 SPRR2DP22532 72 aa1.71□□□□□ -2.14
SH3D19-207ENST00000478503 MT1AP04731 61 aa1.7□□□□□ -2.14
SH3D19-207ENST00000478503 KRTAP5-7Q6L8G8 165 aa1.69□□□□□ -2.14
SH3D19-207ENST00000478503 KRTAP5-5Q701N2 237 aaPredicted RBP1.65□□□□□ -2.14
SH3D19-207ENST00000478503 KRTAP5-10Q6L8G5 202 aa1.64□□□□□ -2.15
SH3D19-207ENST00000478503 KRTAP6-2Q3LI66 62 aa1.63□□□□□ -2.15
SH3D19-207ENST00000478503 AHNAKQ09666 5890 aaKnown RBP1.62□□□□□ -2.15
SH3D19-207ENST00000478503 MUC5BQ9HC84 5762 aaPredicted RBP1.61□□□□□ -2.15
SH3D19-207ENST00000478503 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.6□□□□□ -2.15
SH3D19-207ENST00000478503 MT4P47944 62 aa1.59□□□□□ -2.15
SH3D19-207ENST00000478503 KRTAP4-11Q9BYQ6 195 aa1.59□□□□□ -2.16
SH3D19-207ENST00000478503 KRTAP5-4Q6L8H1 288 aa1.55□□□□□ -2.16
SH3D19-207ENST00000478503 AHNAK2Q8IVF2 5795 aa1.53□□□□□ -2.17
SH3D19-207ENST00000478503 LCE1CQ5T751 118 aa1.49□□□□□ -2.17
SH3D19-207ENST00000478503 LCE1BQ5T7P3 118 aa1.49□□□□□ -2.17
SH3D19-207ENST00000478503 KRTAP20-2Q3LI61 65 aa1.44□□□□□ -2.18
SH3D19-207ENST00000478503 MUC5ACP98088 5654 aa1.38□□□□□ -2.19
SH3D19-207ENST00000478503 KRTAP5-2Q701N4 177 aa1.34□□□□□ -2.19
SH3D19-207ENST00000478503 KRTAP5-8O75690 187 aa1.28□□□□□ -2.2
SH3D19-207ENST00000478503 KRTAP4-4Q9BYR3 166 aa1.23□□□□□ -2.21
SH3D19-207ENST00000478503 KRTAP5-1Q6L8H4 278 aa1.22□□□□□ -2.21
SH3D19-207ENST00000478503 KRTAP5-11Q6L8G4 156 aa1.14□□□□□ -2.23
SH3D19-207ENST00000478503 KRTAP21-2Q3LI59 83 aa1.12□□□□□ -2.23
SH3D19-207ENST00000478503 KRTAP21-1Q3LI58 79 aa1.02□□□□□ -2.25
SH3D19-207ENST00000478503 PHGR1C9JFL3 82 aa0.87□□□□□ -2.27
SH3D19-207ENST00000478503 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 127.5 ms