RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 INE1O15225 51 aa4.13□□□□□ -1.75
PCCB-214ENST00000478469 MT1LQ93083 61 aa4.12□□□□□ -1.75
PCCB-214ENST00000478469 KRTAP19-7Q3SYF9 63 aa4.03□□□□□ -1.76
PCCB-214ENST00000478469 KRTAP4-7Q9BYR0 210 aa4.03□□□□□ -1.76
PCCB-214ENST00000478469 SPRR5A0A1B0GTR4 108 aa4.01□□□□□ -1.77
PCCB-214ENST00000478469 KRTAP9-7A8MTY7 169 aa3.98□□□□□ -1.77
PCCB-214ENST00000478469 MT1MQ8N339 61 aa3.98□□□□□ -1.77
PCCB-214ENST00000478469 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.98□□□□□ -1.77
PCCB-214ENST00000478469 SSPOA2VEC9 5147 aa3.94□□□□□ -1.78
PCCB-214ENST00000478469 SYNE1Q8NF91 8797 aaKnown RBP3.93□□□□□ -1.78
PCCB-214ENST00000478469 FCGBPQ9Y6R7 5405 aaPredicted RBP3.91□□□□□ -1.78
PCCB-214ENST00000478469 KRTAP12-4P60329 112 aa3.91□□□□□ -1.78
PCCB-214ENST00000478469 KRTAP6-3Q3LI67 103 aa3.9□□□□□ -1.79
PCCB-214ENST00000478469 LCE3BQ5TA77 95 aa3.88□□□□□ -1.79
PCCB-214ENST00000478469 KRTAP4-3Q9BYR4 195 aa3.86□□□□□ -1.79
PCCB-214ENST00000478469 SYNE2Q8WXH0 6885 aaKnown RBP3.85□□□□□ -1.79
PCCB-214ENST00000478469 MACF1Q9UPN3 7388 aaKnown RBP3.84□□□□□ -1.8
PCCB-214ENST00000478469 KMT2DO14686 5537 aa3.81□□□□□ -1.8
PCCB-214ENST00000478469 LCE1AQ5T7P2 110 aa3.8□□□□□ -1.8
PCCB-214ENST00000478469 DSTQ03001 7570 aaKnown RBP3.78□□□□□ -1.81
PCCB-214ENST00000478469 LOC100996750A0A140TA64 210 aa3.77□□□□□ -1.81
PCCB-214ENST00000478469 LCE5AQ5TCM9 118 aa3.73□□□□□ -1.81
PCCB-214ENST00000478469 MUC12Q9UKN1 5478 aa3.69□□□□□ -1.82
PCCB-214ENST00000478469 MT4P47944 62 aa3.68□□□□□ -1.82
PCCB-214ENST00000478469 KRTAP20-1Q3LI63 56 aa3.68□□□□□ -1.82
PCCB-214ENST00000478469 OBSCNQ5VST9 7968 aa3.63□□□□□ -1.83
PCCB-214ENST00000478469 KRTAP2-3P0C7H8 128 aa3.62□□□□□ -1.83
PCCB-214ENST00000478469 KRTAP2-4Q9BYR9 128 aa3.62□□□□□ -1.83
PCCB-214ENST00000478469 MT1AP04731 61 aa3.61□□□□□ -1.83
PCCB-214ENST00000478469 KRTAP5-9P26371 169 aa3.61□□□□□ -1.83
PCCB-214ENST00000478469 LCE3DQ9BYE3 92 aa3.61□□□□□ -1.83
PCCB-214ENST00000478469 MT3P25713 68 aa3.58□□□□□ -1.84
PCCB-214ENST00000478469 KRTAP9-6A8MVA2 160 aa3.58□□□□□ -1.84
PCCB-214ENST00000478469 KRTAP2-2Q9BYT5 123 aa3.54□□□□□ -1.84
PCCB-214ENST00000478469 KRTAP2-1Q9BYU5 128 aa3.54□□□□□ -1.84
PCCB-214ENST00000478469 LCE3EQ5T5B0 92 aa3.52□□□□□ -1.85
PCCB-214ENST00000478469 MDN1Q9NU22 5596 aa3.47□□□□□ -1.85
PCCB-214ENST00000478469 KRTAP6-1Q3LI64 71 aa3.45□□□□□ -1.86
PCCB-214ENST00000478469 KRTAP4-9Q9BYQ8 210 aa3.45□□□□□ -1.86
PCCB-214ENST00000478469 LCE4AQ5TA78 99 aa3.43□□□□□ -1.86
PCCB-214ENST00000478469 NEBP20929 6669 aa3.42□□□□□ -1.86
PCCB-214ENST00000478469 KRTAP9-4Q9BYQ2 154 aa3.35□□□□□ -1.87
PCCB-214ENST00000478469 KRTAP6-2Q3LI66 62 aa3.32□□□□□ -1.88
PCCB-214ENST00000478469 LCE1DQ5T752 114 aa3.28□□□□□ -1.88
PCCB-214ENST00000478469 LCE1BQ5T7P3 118 aa3.22□□□□□ -1.89
PCCB-214ENST00000478469 KRTAP4-6Q9BYQ5 205 aa3.16□□□□□ -1.9
PCCB-214ENST00000478469 PRM1P04553 51 aa3.09□□□□□ -1.91
PCCB-214ENST00000478469 KRTAP20-2Q3LI61 65 aa3.06□□□□□ -1.92
PCCB-214ENST00000478469 KRTAP5-5Q701N2 237 aaPredicted RBP2.99□□□□□ -1.93
PCCB-214ENST00000478469 GPR98Q8WXG9 6306 aa2.94□□□□□ -1.94
PCCB-214ENST00000478469 KRTAP5-4Q6L8H1 288 aa2.91□□□□□ -1.94
PCCB-214ENST00000478469 KRTAP9-9Q9BYP9 154 aa2.78□□□□□ -1.97
PCCB-214ENST00000478469 KRTAP4-11Q9BYQ6 195 aa2.76□□□□□ -1.97
PCCB-214ENST00000478469 HMCN1Q96RW7 5635 aa2.75□□□□□ -1.97
PCCB-214ENST00000478469 KRTAP5-3Q6L8H2 238 aa2.7□□□□□ -1.98
PCCB-214ENST00000478469 LCE1EQ5T753 118 aa2.65□□□□□ -1.98
PCCB-214ENST00000478469 MUC5ACP98088 5654 aa2.64□□□□□ -1.99
PCCB-214ENST00000478469 MUC19Q7Z5P9 8384 aa2.63□□□□□ -1.99
PCCB-214ENST00000478469 LCE1CQ5T751 118 aa2.6□□□□□ -1.99
PCCB-214ENST00000478469 LCE1FQ5T754 118 aa2.6□□□□□ -1.99
PCCB-214ENST00000478469 KRTAP5-2Q701N4 177 aa2.56□□□□□ -2
PCCB-214ENST00000478469 AHNAK2Q8IVF2 5795 aa2.49□□□□□ -2.01
PCCB-214ENST00000478469 KRTAP5-8O75690 187 aa2.45□□□□□ -2.02
PCCB-214ENST00000478469 KRTAP4-12Q9BQ66 201 aa2.43□□□□□ -2.02
PCCB-214ENST00000478469 KRTAP4-2Q9BYR5 136 aa2.43□□□□□ -2.02
PCCB-214ENST00000478469 KRTAP4-4Q9BYR3 166 aa2.32□□□□□ -2.04
PCCB-214ENST00000478469 KRTAP5-1Q6L8H4 278 aa2.27□□□□□ -2.05
PCCB-214ENST00000478469 KRTAP5-10Q6L8G5 202 aa2.27□□□□□ -2.05
PCCB-214ENST00000478469 KRTAP5-7Q6L8G8 165 aa2.13□□□□□ -2.07
PCCB-214ENST00000478469 AHNAKQ09666 5890 aaKnown RBP2.1□□□□□ -2.07
PCCB-214ENST00000478469 MUC5BQ9HC84 5762 aaPredicted RBP2.09□□□□□ -2.07
PCCB-214ENST00000478469 KRTAP5-11Q6L8G4 156 aa2.09□□□□□ -2.08
PCCB-214ENST00000478469 KRTAP5-6Q6L8G9 129 aaPredicted RBP2□□□□□ -2.09
PCCB-214ENST00000478469 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
PCCB-214ENST00000478469 PHGR1C9JFL3 82 aa1.84□□□□□ -2.12
PCCB-214ENST00000478469 KRTAP21-1Q3LI58 79 aa1.47□□□□□ -2.17
PCCB-214ENST00000478469 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 74.4 ms