RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 KRTAP4-7Q9BYR0 210 aa5.65□□□□□ -1.5
TRIM13-208ENST00000478111 H7BZZ5 65 aa5.61□□□□□ -1.51
TRIM13-208ENST00000478111 KRTAP5-7Q6L8G8 165 aa5.61□□□□□ -1.51
TRIM13-208ENST00000478111 KRTAP5-3Q6L8H2 238 aa5.61□□□□□ -1.51
TRIM13-208ENST00000478111 COX7CP15954 63 aa5.6□□□□□ -1.51
TRIM13-208ENST00000478111 A0A1B0GU69 56 aa5.59□□□□□ -1.51
TRIM13-208ENST00000478111 KRTAP20-2Q3LI61 65 aa5.55□□□□□ -1.52
TRIM13-208ENST00000478111 KRTAP12-3P60328 96 aa5.53□□□□□ -1.52
TRIM13-208ENST00000478111 KRTAP5-5Q701N2 237 aaPredicted RBP5.53□□□□□ -1.52
TRIM13-208ENST00000478111 SPRR5A0A1B0GTR4 108 aa5.48□□□□□ -1.53
TRIM13-208ENST00000478111 SYNE1Q8NF91 8797 aaKnown RBP5.42□□□□□ -1.54
TRIM13-208ENST00000478111 KRTAP12-4P60329 112 aa5.38□□□□□ -1.55
TRIM13-208ENST00000478111 LOC100996750A0A140TA64 210 aa5.36□□□□□ -1.55
TRIM13-208ENST00000478111 PRR15LQ9BU68 103 aa5.31□□□□□ -1.56
TRIM13-208ENST00000478111 LINC01558Q9Y6Z2 57 aa5.26□□□□□ -1.57
TRIM13-208ENST00000478111 KRTAP25-1Q3LHN0 102 aa5.2□□□□□ -1.58
TRIM13-208ENST00000478111 ANAPC13Q9BS18 74 aa5.2□□□□□ -1.58
TRIM13-208ENST00000478111 KRTAP19-4Q3LI73 84 aa5.19□□□□□ -1.58
TRIM13-208ENST00000478111 CCDC179H3BU77 68 aa5.17□□□□□ -1.58
TRIM13-208ENST00000478111 UQCR11O14957 56 aa5.16□□□□□ -1.58
TRIM13-208ENST00000478111 ATP5EP56381 51 aaPredicted RBP5.13□□□□□ -1.59
TRIM13-208ENST00000478111 KRTAP4-11Q9BYQ6 195 aa5.12□□□□□ -1.59
TRIM13-208ENST00000478111 KRTAP5-2Q701N4 177 aa5.1□□□□□ -1.59
TRIM13-208ENST00000478111 LCE3CQ5T5A8 94 aa5.08□□□□□ -1.6
TRIM13-208ENST00000478111 KRTAP15-1Q3LI76 137 aa5.07□□□□□ -1.6
TRIM13-208ENST00000478111 KRTAP6-1Q3LI64 71 aa5.04□□□□□ -1.6
TRIM13-208ENST00000478111 MT1AP04731 61 aa5.03□□□□□ -1.6
TRIM13-208ENST00000478111 KRTAP23-1A1A580 65 aa5.01□□□□□ -1.61
TRIM13-208ENST00000478111 MIR22HGQ0VDD5 57 aa5.01□□□□□ -1.61
TRIM13-208ENST00000478111 KRTAP5-8O75690 187 aa4.98□□□□□ -1.61
TRIM13-208ENST00000478111 MUC5BQ9HC84 5762 aaPredicted RBP4.96□□□□□ -1.62
TRIM13-208ENST00000478111 AHNAKQ09666 5890 aaKnown RBP4.93□□□□□ -1.62
TRIM13-208ENST00000478111 K7ERS5 55 aa4.92□□□□□ -1.62
TRIM13-208ENST00000478111 MUC5ACP98088 5654 aa4.91□□□□□ -1.62
TRIM13-208ENST00000478111 OBSCNQ5VST9 7968 aa4.9□□□□□ -1.62
TRIM13-208ENST00000478111 TMEM258P61165 79 aa4.9□□□□□ -1.63
TRIM13-208ENST00000478111 KRTAP9-4Q9BYQ2 154 aa4.9□□□□□ -1.63
TRIM13-208ENST00000478111 KRTAP9-6A8MVA2 160 aa4.86□□□□□ -1.63
TRIM13-208ENST00000478111 KRTAP6-2Q3LI66 62 aa4.85□□□□□ -1.63
TRIM13-208ENST00000478111 PSPHP1O15172 72 aa4.76□□□□□ -1.65
TRIM13-208ENST00000478111 KRTAP9-9Q9BYP9 154 aa4.72□□□□□ -1.65
TRIM13-208ENST00000478111 Q1T7F1 81 aa4.7□□□□□ -1.66
TRIM13-208ENST00000478111 V9GYY9 64 aa4.68□□□□□ -1.66
TRIM13-208ENST00000478111 CDC42SE1Q9NRR8 79 aa4.65□□□□□ -1.67
TRIM13-208ENST00000478111 RPS28P62857 69 aaKnown RBP4.63□□□□□ -1.67
TRIM13-208ENST00000478111 KRTAP5-1Q6L8H4 278 aa4.63□□□□□ -1.67
TRIM13-208ENST00000478111 KRTAP4-12Q9BQ66 201 aa4.63□□□□□ -1.67
TRIM13-208ENST00000478111 MT3P25713 68 aa4.59□□□□□ -1.67
TRIM13-208ENST00000478111 ROMO1P60602 79 aa4.59□□□□□ -1.67
TRIM13-208ENST00000478111 A6NED7 52 aa4.55□□□□□ -1.68
TRIM13-208ENST00000478111 H3BS24 57 aa4.4□□□□□ -1.71
TRIM13-208ENST00000478111 LCE1EQ5T753 118 aa4.3□□□□□ -1.72
TRIM13-208ENST00000478111 KRTAP4-2Q9BYR5 136 aa4.16□□□□□ -1.74
TRIM13-208ENST00000478111 LCE1BQ5T7P3 118 aa4.05□□□□□ -1.76
TRIM13-208ENST00000478111 LCE1CQ5T751 118 aa4□□□□□ -1.77
TRIM13-208ENST00000478111 PCP4P48539 62 aa3.71□□□□□ -1.82
TRIM13-208ENST00000478111 KRTAP5-11Q6L8G4 156 aa3.65□□□□□ -1.83
TRIM13-208ENST00000478111 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.62□□□□□ -1.83
TRIM13-208ENST00000478111 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
TRIM13-208ENST00000478111 LCE3DQ9BYE3 92 aa3.59□□□□□ -1.83
TRIM13-208ENST00000478111 BRK1Q8WUW1 75 aa3.53□□□□□ -1.84
TRIM13-208ENST00000478111 PHGR1C9JFL3 82 aa3.37□□□□□ -1.87
TRIM13-208ENST00000478111 KRTAP21-2Q3LI59 83 aa3.34□□□□□ -1.87
TRIM13-208ENST00000478111 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
TRIM13-208ENST00000478111 PRAC1Q96KF2 57 aa3.32□□□□□ -1.88
TRIM13-208ENST00000478111 PMAIP1Q13794 54 aa3.29□□□□□ -1.88
TRIM13-208ENST00000478111 KRTAP4-4Q9BYR3 166 aa3.08□□□□□ -1.92
TRIM13-208ENST00000478111 MUC19Q7Z5P9 8384 aa3.04□□□□□ -1.92
TRIM13-208ENST00000478111 SVIPQ8NHG7 77 aa2.93□□□□□ -1.94
TRIM13-208ENST00000478111 LUZP6Q538Z0 58 aa2.77□□□□□ -1.97
TRIM13-208ENST00000478111 A0A0A0MQY5 61 aa2.74□□□□□ -1.97
TRIM13-208ENST00000478111 PRO0628Q9UI54 55 aa2.71□□□□□ -1.98
TRIM13-208ENST00000478111 KTN1-AS1Q86SY8 53 aa2.7□□□□□ -1.98
TRIM13-208ENST00000478111 KRTAP21-1Q3LI58 79 aa2.55□□□□□ -2
TRIM13-208ENST00000478111 NDUFAF8A1L188 74 aa2.43□□□□□ -2.02
TRIM13-208ENST00000478111 PRM1P04553 51 aa2.34□□□□□ -2.03
TRIM13-208ENST00000478111 MUC16Q8WXI7 14507 aa2.09□□□□□ -2.08
TRIM13-208ENST00000478111 INE1O15225 51 aa1.38□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 318.3 ms