RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 UQCR11O14957 56 aa3.99□□□□□ -1.77
HDAC6-222ENST00000478095 PSPHP1O15172 72 aa3.97□□□□□ -1.77
HDAC6-222ENST00000478095 SPRR2EP22531 72 aa3.97□□□□□ -1.77
HDAC6-222ENST00000478095 SPRR2BP35325 72 aa3.97□□□□□ -1.77
HDAC6-222ENST00000478095 SPRR2AP35326 72 aa3.97□□□□□ -1.77
HDAC6-222ENST00000478095 V9GYY9 64 aa3.95□□□□□ -1.78
HDAC6-222ENST00000478095 Q1T7F1 81 aa3.94□□□□□ -1.78
HDAC6-222ENST00000478095 MIR22HGQ0VDD5 57 aa3.93□□□□□ -1.78
HDAC6-222ENST00000478095 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.92□□□□□ -1.78
HDAC6-222ENST00000478095 C10orf95Q9H7T3 257 aa3.91□□□□□ -1.78
HDAC6-222ENST00000478095 KRTAP20-1Q3LI63 56 aa3.87□□□□□ -1.79
HDAC6-222ENST00000478095 TNP1P09430 55 aa3.85□□□□□ -1.79
HDAC6-222ENST00000478095 RPS28P62857 69 aaKnown RBP3.85□□□□□ -1.79
HDAC6-222ENST00000478095 KRTAP19-7Q3SYF9 63 aa3.85□□□□□ -1.79
HDAC6-222ENST00000478095 A6NED7 52 aa3.83□□□□□ -1.8
HDAC6-222ENST00000478095 SPRR2DP22532 72 aa3.83□□□□□ -1.8
HDAC6-222ENST00000478095 K7ERS5 55 aa3.81□□□□□ -1.8
HDAC6-222ENST00000478095 MT1EP04732 61 aa3.81□□□□□ -1.8
HDAC6-222ENST00000478095 KRTAP19-5Q3LI72 72 aa3.81□□□□□ -1.8
HDAC6-222ENST00000478095 LCE3AQ5TA76 89 aa3.81□□□□□ -1.8
HDAC6-222ENST00000478095 KRTAP2-3P0C7H8 128 aa3.79□□□□□ -1.8
HDAC6-222ENST00000478095 KRTAP2-4Q9BYR9 128 aa3.79□□□□□ -1.8
HDAC6-222ENST00000478095 KRTAP19-3Q7Z4W3 81 aa3.74□□□□□ -1.81
HDAC6-222ENST00000478095 KRTAP25-1Q3LHN0 102 aa3.7□□□□□ -1.82
HDAC6-222ENST00000478095 LCE1FQ5T754 118 aa3.69□□□□□ -1.82
HDAC6-222ENST00000478095 KRTAP2-1Q9BYU5 128 aa3.69□□□□□ -1.82
HDAC6-222ENST00000478095 MT1LQ93083 61 aa3.67□□□□□ -1.82
HDAC6-222ENST00000478095 CDC42SE1Q9NRR8 79 aa3.66□□□□□ -1.82
HDAC6-222ENST00000478095 MT1GP13640 62 aa3.65□□□□□ -1.83
HDAC6-222ENST00000478095 KRTAP12-3P60328 96 aa3.64□□□□□ -1.83
HDAC6-222ENST00000478095 PRAC1Q96KF2 57 aa3.63□□□□□ -1.83
HDAC6-222ENST00000478095 PP632Q6XCG6 107 aa3.62□□□□□ -1.83
HDAC6-222ENST00000478095 DSTQ03001 7570 aaKnown RBP3.61□□□□□ -1.83
HDAC6-222ENST00000478095 NDUFAF8A1L188 74 aa3.61□□□□□ -1.83
HDAC6-222ENST00000478095 MT1MQ8N339 61 aa3.61□□□□□ -1.83
HDAC6-222ENST00000478095 ROMO1P60602 79 aa3.59□□□□□ -1.83
HDAC6-222ENST00000478095 KRTAP4-3Q9BYR4 195 aa3.57□□□□□ -1.84
HDAC6-222ENST00000478095 KRTAP9-6A8MVA2 160 aa3.56□□□□□ -1.84
HDAC6-222ENST00000478095 LCE3CQ5T5A8 94 aa3.5□□□□□ -1.85
HDAC6-222ENST00000478095 BRK1Q8WUW1 75 aa3.47□□□□□ -1.85
HDAC6-222ENST00000478095 KRTAP5-1Q6L8H4 278 aa3.44□□□□□ -1.86
HDAC6-222ENST00000478095 MT4P47944 62 aa3.35□□□□□ -1.87
HDAC6-222ENST00000478095 KRTAP5-4Q6L8H1 288 aa3.33□□□□□ -1.88
HDAC6-222ENST00000478095 HMCN1Q96RW7 5635 aa3.29□□□□□ -1.88
HDAC6-222ENST00000478095 KRTAP5-5Q701N2 237 aaPredicted RBP3.29□□□□□ -1.88
HDAC6-222ENST00000478095 GPR98Q8WXG9 6306 aa3.29□□□□□ -1.88
HDAC6-222ENST00000478095 KRTAP4-4Q9BYR3 166 aa3.26□□□□□ -1.89
HDAC6-222ENST00000478095 PMAIP1Q13794 54 aa3.24□□□□□ -1.89
HDAC6-222ENST00000478095 LCE3EQ5T5B0 92 aa3.19□□□□□ -1.9
HDAC6-222ENST00000478095 KRTAP12-4P60329 112 aa3.15□□□□□ -1.91
HDAC6-222ENST00000478095 KRTAP20-2Q3LI61 65 aa3.15□□□□□ -1.91
HDAC6-222ENST00000478095 PRO0628Q9UI54 55 aa3.13□□□□□ -1.91
HDAC6-222ENST00000478095 SPRR5A0A1B0GTR4 108 aa3.12□□□□□ -1.91
HDAC6-222ENST00000478095 MT1AP04731 61 aa3.12□□□□□ -1.91
HDAC6-222ENST00000478095 SYNE1Q8NF91 8797 aaKnown RBP3.11□□□□□ -1.91
HDAC6-222ENST00000478095 AHNAK2Q8IVF2 5795 aa3.1□□□□□ -1.91
HDAC6-222ENST00000478095 KRTAP6-1Q3LI64 71 aa3.1□□□□□ -1.91
HDAC6-222ENST00000478095 KRTAP5-10Q6L8G5 202 aa3.04□□□□□ -1.92
HDAC6-222ENST00000478095 OBSCNQ5VST9 7968 aa2.96□□□□□ -1.93
HDAC6-222ENST00000478095 KTN1-AS1Q86SY8 53 aa2.96□□□□□ -1.94
HDAC6-222ENST00000478095 KRTAP5-2Q701N4 177 aa2.95□□□□□ -1.94
HDAC6-222ENST00000478095 KRTAP6-2Q3LI66 62 aa2.94□□□□□ -1.94
HDAC6-222ENST00000478095 KRTAP5-7Q6L8G8 165 aa2.94□□□□□ -1.94
HDAC6-222ENST00000478095 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
HDAC6-222ENST00000478095 LCE1CQ5T751 118 aa2.65□□□□□ -1.99
HDAC6-222ENST00000478095 LCE1BQ5T7P3 118 aa2.65□□□□□ -1.99
HDAC6-222ENST00000478095 MUC5BQ9HC84 5762 aaPredicted RBP2.59□□□□□ -1.99
HDAC6-222ENST00000478095 LUZP6Q538Z0 58 aa2.58□□□□□ -2
HDAC6-222ENST00000478095 AHNAKQ09666 5890 aaKnown RBP2.57□□□□□ -2
HDAC6-222ENST00000478095 LCE3DQ9BYE3 92 aa2.57□□□□□ -2
HDAC6-222ENST00000478095 MUC5ACP98088 5654 aa2.56□□□□□ -2
HDAC6-222ENST00000478095 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.07
HDAC6-222ENST00000478095 KRTAP21-2Q3LI59 83 aa2.03□□□□□ -2.08
HDAC6-222ENST00000478095 INE1O15225 51 aa1.88□□□□□ -2.11
HDAC6-222ENST00000478095 PRM1P04553 51 aa1.86□□□□□ -2.11
HDAC6-222ENST00000478095 PHGR1C9JFL3 82 aa1.84□□□□□ -2.11
HDAC6-222ENST00000478095 KRTAP21-1Q3LI58 79 aa1.35□□□□□ -2.19
HDAC6-222ENST00000478095 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 7.6 ms