RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 PRLHP81277 87 aa1.41□□□□□ -2.18
FNDC3B-209ENST00000478016 KRTAP6-3Q3LI67 103 aa1.41□□□□□ -2.18
FNDC3B-209ENST00000478016 FAT4Q6V0I7 4981 aa1.41□□□□□ -2.18
FNDC3B-209ENST00000478016 MT1HL1P0DM35 61 aa1.39□□□□□ -2.19
FNDC3B-209ENST00000478016 KRTAP12-1P59990 96 aa1.39□□□□□ -2.19
FNDC3B-209ENST00000478016 A0A096LNI7 61 aa1.38□□□□□ -2.19
FNDC3B-209ENST00000478016 MUC17Q685J3 4493 aa1.35□□□□□ -2.19
FNDC3B-209ENST00000478016 KRTAP12-4P60329 112 aa1.35□□□□□ -2.19
FNDC3B-209ENST00000478016 SPINK6Q6UWN8 80 aa1.35□□□□□ -2.19
FNDC3B-209ENST00000478016 KRTAP13-1Q8IUC0 172 aa1.35□□□□□ -2.19
FNDC3B-209ENST00000478016 FSIP2Q5CZC0 6907 aa1.35□□□□□ -2.19
FNDC3B-209ENST00000478016 SPINK1P00995 79 aa1.33□□□□□ -2.2
FNDC3B-209ENST00000478016 RPS29P62273 56 aaKnown RBP1.33□□□□□ -2.2
FNDC3B-209ENST00000478016 A0A0D9SG42 100 aa1.31□□□□□ -2.2
FNDC3B-209ENST00000478016 M0QZ58 72 aa1.3□□□□□ -2.2
FNDC3B-209ENST00000478016 USH2AO75445 5202 aa1.27□□□□□ -2.21
FNDC3B-209ENST00000478016 KRTAP5-7Q6L8G8 165 aa1.27□□□□□ -2.21
FNDC3B-209ENST00000478016 SSPOA2VEC9 5147 aa1.24□□□□□ -2.21
FNDC3B-209ENST00000478016 SYNE2Q8WXH0 6885 aaKnown RBP1.24□□□□□ -2.21
FNDC3B-209ENST00000478016 KRTAP4-1Q9BYQ7 146 aa1.23□□□□□ -2.21
FNDC3B-209ENST00000478016 FLGP20930 4061 aaPredicted RBP1.22□□□□□ -2.21
FNDC3B-209ENST00000478016 MACF1Q9UPN3 7388 aaKnown RBP1.22□□□□□ -2.21
FNDC3B-209ENST00000478016 C9orf92A6NGG3 77 aa1.21□□□□□ -2.22
FNDC3B-209ENST00000478016 KRTAP12-3P60328 96 aa1.21□□□□□ -2.22
FNDC3B-209ENST00000478016 CRCT1Q9UGL9 99 aa1.21□□□□□ -2.22
FNDC3B-209ENST00000478016 MT1HP80294 61 aa1.2□□□□□ -2.22
FNDC3B-209ENST00000478016 KRTAP19-2Q3LHN2 52 aa1.19□□□□□ -2.22
FNDC3B-209ENST00000478016 MUC19Q7Z5P9 8384 aa1.18□□□□□ -2.22
FNDC3B-209ENST00000478016 M0R2T5 61 aa1.18□□□□□ -2.22
FNDC3B-209ENST00000478016 FCGBPQ9Y6R7 5405 aaPredicted RBP1.18□□□□□ -2.22
FNDC3B-209ENST00000478016 NEBP20929 6669 aa1.17□□□□□ -2.22
FNDC3B-209ENST00000478016 KRTAP2-3P0C7H8 128 aa1.17□□□□□ -2.22
FNDC3B-209ENST00000478016 KRTAP2-4Q9BYR9 128 aa1.17□□□□□ -2.22
FNDC3B-209ENST00000478016 KRTAP2-1Q9BYU5 128 aa1.17□□□□□ -2.22
FNDC3B-209ENST00000478016 HMCN1Q96RW7 5635 aa1.15□□□□□ -2.22
FNDC3B-209ENST00000478016 TNP1P09430 55 aa1.14□□□□□ -2.23
FNDC3B-209ENST00000478016 MUC12Q9UKN1 5478 aa1.13□□□□□ -2.23
FNDC3B-209ENST00000478016 MT2AP02795 61 aa1.11□□□□□ -2.23
FNDC3B-209ENST00000478016 MT1FP04733 61 aa1.11□□□□□ -2.23
FNDC3B-209ENST00000478016 MDN1Q9NU22 5596 aa1.09□□□□□ -2.24
FNDC3B-209ENST00000478016 KRTAP21-2Q3LI59 83 aa1.07□□□□□ -2.24
FNDC3B-209ENST00000478016 KRTAP8-1Q8IUC2 63 aa1.06□□□□□ -2.24
FNDC3B-209ENST00000478016 KMT2DO14686 5537 aa1.05□□□□□ -2.24
FNDC3B-209ENST00000478016 KRTAP19-6Q3LI70 58 aa1.05□□□□□ -2.24
FNDC3B-209ENST00000478016 GPR98Q8WXG9 6306 aa1.02□□□□□ -2.25
FNDC3B-209ENST00000478016 MT1BP07438 61 aa0.99□□□□□ -2.25
FNDC3B-209ENST00000478016 KRTAP20-1Q3LI63 56 aa0.99□□□□□ -2.25
FNDC3B-209ENST00000478016 SPRR2GQ9BYE4 73 aa0.99□□□□□ -2.25
FNDC3B-209ENST00000478016 KRTAP19-8Q3LI54 63 aa0.97□□□□□ -2.25
FNDC3B-209ENST00000478016 DSTQ03001 7570 aaKnown RBP0.96□□□□□ -2.26
FNDC3B-209ENST00000478016 SPRR2EP22531 72 aa0.95□□□□□ -2.26
FNDC3B-209ENST00000478016 SPRR2BP35325 72 aa0.95□□□□□ -2.26
FNDC3B-209ENST00000478016 SPRR2AP35326 72 aa0.95□□□□□ -2.26
FNDC3B-209ENST00000478016 SPRR2FQ96RM1 72 aa0.95□□□□□ -2.26
FNDC3B-209ENST00000478016 PRM1P04553 51 aa0.94□□□□□ -2.26
FNDC3B-209ENST00000478016 AHNAK2Q8IVF2 5795 aa0.92□□□□□ -2.26
FNDC3B-209ENST00000478016 SPRR2DP22532 72 aa0.92□□□□□ -2.26
FNDC3B-209ENST00000478016 MT1XP80297 61 aa0.92□□□□□ -2.26
FNDC3B-209ENST00000478016 SYNE1Q8NF91 8797 aaKnown RBP0.9□□□□□ -2.27
FNDC3B-209ENST00000478016 KRTAP19-5Q3LI72 72 aa0.89□□□□□ -2.27
FNDC3B-209ENST00000478016 MT1AP04731 61 aa0.87□□□□□ -2.27
FNDC3B-209ENST00000478016 KRTAP19-3Q7Z4W3 81 aa0.86□□□□□ -2.27
FNDC3B-209ENST00000478016 MT1EP04732 61 aa0.82□□□□□ -2.28
FNDC3B-209ENST00000478016 MT4P47944 62 aa0.82□□□□□ -2.28
FNDC3B-209ENST00000478016 KRTAP19-7Q3SYF9 63 aa0.82□□□□□ -2.28
FNDC3B-209ENST00000478016 MT1GP13640 62 aa0.8□□□□□ -2.28
FNDC3B-209ENST00000478016 MT1MQ8N339 61 aa0.79□□□□□ -2.28
FNDC3B-209ENST00000478016 KRTAP21-1Q3LI58 79 aa0.78□□□□□ -2.28
FNDC3B-209ENST00000478016 AHNAKQ09666 5890 aaKnown RBP0.78□□□□□ -2.28
FNDC3B-209ENST00000478016 KRTAP5-10Q6L8G5 202 aa0.77□□□□□ -2.29
FNDC3B-209ENST00000478016 MT1LQ93083 61 aa0.77□□□□□ -2.29
FNDC3B-209ENST00000478016 KRTAP6-2Q3LI66 62 aa0.76□□□□□ -2.29
FNDC3B-209ENST00000478016 MUC5BQ9HC84 5762 aaPredicted RBP0.75□□□□□ -2.29
FNDC3B-209ENST00000478016 MUC5ACP98088 5654 aa0.75□□□□□ -2.29
FNDC3B-209ENST00000478016 KRTAP20-2Q3LI61 65 aa0.73□□□□□ -2.29
FNDC3B-209ENST00000478016 KRTAP6-1Q3LI64 71 aa0.66□□□□□ -2.3
FNDC3B-209ENST00000478016 MUC16Q8WXI7 14507 aa0.5□□□□□ -2.33
FNDC3B-209ENST00000478016 PHGR1C9JFL3 82 aa0.47□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 100 ms