RNA–Protein interactions for RNA: ENST00000477552.1

PTPRD-209, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 4

Gene PTPRD, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-209ENST00000477552 KRTAP12-3P60328 96 aa3.3□□□□□ -1.88
PTPRD-209ENST00000477552 FAT4Q6V0I7 4981 aa3.28□□□□□ -1.88
PTPRD-209ENST00000477552 UBR4Q5T4S7 5183 aa3.26□□□□□ -1.89
PTPRD-209ENST00000477552 INE1O15225 51 aa3.2□□□□□ -1.9
PTPRD-209ENST00000477552 KRTAP10-7P60409 375 aaPredicted RBP3.17□□□□□ -1.9
PTPRD-209ENST00000477552 LCE3CQ5T5A8 94 aa3.11□□□□□ -1.91
PTPRD-209ENST00000477552 KRTAP19-5Q3LI72 72 aa3.08□□□□□ -1.92
PTPRD-209ENST00000477552 KRTAP19-6Q3LI70 58 aa2.98□□□□□ -1.93
PTPRD-209ENST00000477552 KRTAP19-7Q3SYF9 63 aa2.96□□□□□ -1.94
PTPRD-209ENST00000477552 USH2AO75445 5202 aa2.92□□□□□ -1.94
PTPRD-209ENST00000477552 MT1EP04732 61 aa2.91□□□□□ -1.94
PTPRD-209ENST00000477552 MT1LQ93083 61 aa2.91□□□□□ -1.94
PTPRD-209ENST00000477552 KRTAP2-3P0C7H8 128 aa2.88□□□□□ -1.95
PTPRD-209ENST00000477552 KRTAP2-4Q9BYR9 128 aa2.88□□□□□ -1.95
PTPRD-209ENST00000477552 KRTAP2-1Q9BYU5 128 aa2.88□□□□□ -1.95
PTPRD-209ENST00000477552 SSPOA2VEC9 5147 aa2.86□□□□□ -1.95
PTPRD-209ENST00000477552 MT1GP13640 62 aa2.84□□□□□ -1.95
PTPRD-209ENST00000477552 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.84□□□□□ -1.95
PTPRD-209ENST00000477552 KRTAP9-6A8MVA2 160 aa2.81□□□□□ -1.96
PTPRD-209ENST00000477552 KRTAP19-3Q7Z4W3 81 aa2.78□□□□□ -1.96
PTPRD-209ENST00000477552 MT3P25713 68 aa2.76□□□□□ -1.97
PTPRD-209ENST00000477552 LCE1AQ5T7P2 110 aa2.73□□□□□ -1.97
PTPRD-209ENST00000477552 MT1MQ8N339 61 aa2.73□□□□□ -1.97
PTPRD-209ENST00000477552 KMT2DO14686 5537 aa2.71□□□□□ -1.97
PTPRD-209ENST00000477552 SPRR2FQ96RM1 72 aa2.62□□□□□ -1.99
PTPRD-209ENST00000477552 FCGBPQ9Y6R7 5405 aaPredicted RBP2.61□□□□□ -1.99
PTPRD-209ENST00000477552 KRTAP5-11Q6L8G4 156 aa2.59□□□□□ -1.99
PTPRD-209ENST00000477552 MT1AP04731 61 aa2.58□□□□□ -2
PTPRD-209ENST00000477552 KRTAP5-9P26371 169 aa2.55□□□□□ -2
PTPRD-209ENST00000477552 KRTAP4-3Q9BYR4 195 aa2.54□□□□□ -2
PTPRD-209ENST00000477552 KRTAP12-4P60329 112 aa2.5□□□□□ -2.01
PTPRD-209ENST00000477552 KRTAP2-2Q9BYT5 123 aa2.5□□□□□ -2.01
PTPRD-209ENST00000477552 FSIP2Q5CZC0 6907 aa2.49□□□□□ -2.01
PTPRD-209ENST00000477552 MUC12Q9UKN1 5478 aa2.48□□□□□ -2.01
PTPRD-209ENST00000477552 CRCT1Q9UGL9 99 aa2.48□□□□□ -2.01
PTPRD-209ENST00000477552 LCE1FQ5T754 118 aa2.47□□□□□ -2.01
PTPRD-209ENST00000477552 KRTAP5-1Q6L8H4 278 aa2.43□□□□□ -2.02
PTPRD-209ENST00000477552 KRTAP5-5Q701N2 237 aaPredicted RBP2.43□□□□□ -2.02
PTPRD-209ENST00000477552 SPRR2EP22531 72 aa2.42□□□□□ -2.02
PTPRD-209ENST00000477552 SPRR2BP35325 72 aa2.42□□□□□ -2.02
PTPRD-209ENST00000477552 SPRR2AP35326 72 aa2.42□□□□□ -2.02
PTPRD-209ENST00000477552 LCE3DQ9BYE3 92 aa2.42□□□□□ -2.02
PTPRD-209ENST00000477552 KRTAP5-4Q6L8H1 288 aa2.41□□□□□ -2.02
PTPRD-209ENST00000477552 KRTAP6-1Q3LI64 71 aa2.4□□□□□ -2.03
PTPRD-209ENST00000477552 LCE3EQ5T5B0 92 aa2.4□□□□□ -2.03
PTPRD-209ENST00000477552 KRTAP4-4Q9BYR3 166 aa2.39□□□□□ -2.03
PTPRD-209ENST00000477552 MACF1Q9UPN3 7388 aaKnown RBP2.38□□□□□ -2.03
PTPRD-209ENST00000477552 KRTAP6-3Q3LI67 103 aa2.37□□□□□ -2.03
PTPRD-209ENST00000477552 SPRR2DP22532 72 aa2.34□□□□□ -2.03
PTPRD-209ENST00000477552 MDN1Q9NU22 5596 aa2.31□□□□□ -2.04
PTPRD-209ENST00000477552 DSTQ03001 7570 aaKnown RBP2.31□□□□□ -2.04
PTPRD-209ENST00000477552 SYNE2Q8WXH0 6885 aaKnown RBP2.23□□□□□ -2.05
PTPRD-209ENST00000477552 SYNE1Q8NF91 8797 aaKnown RBP2.22□□□□□ -2.05
PTPRD-209ENST00000477552 KRTAP6-2Q3LI66 62 aa2.17□□□□□ -2.06
PTPRD-209ENST00000477552 LCE1EQ5T753 118 aa2.17□□□□□ -2.06
PTPRD-209ENST00000477552 PRM1P04553 51 aa2.16□□□□□ -2.06
PTPRD-209ENST00000477552 KRTAP5-2Q701N4 177 aa2.11□□□□□ -2.07
PTPRD-209ENST00000477552 NEBP20929 6669 aa2.03□□□□□ -2.08
PTPRD-209ENST00000477552 KRTAP20-2Q3LI61 65 aa2.02□□□□□ -2.09
PTPRD-209ENST00000477552 OBSCNQ5VST9 7968 aa2.01□□□□□ -2.09
PTPRD-209ENST00000477552 KRTAP20-1Q3LI63 56 aa2□□□□□ -2.09
PTPRD-209ENST00000477552 MT4P47944 62 aa1.94□□□□□ -2.1
PTPRD-209ENST00000477552 HMCN1Q96RW7 5635 aa1.86□□□□□ -2.11
PTPRD-209ENST00000477552 KRTAP5-8O75690 187 aa1.82□□□□□ -2.12
PTPRD-209ENST00000477552 LCE1CQ5T751 118 aa1.81□□□□□ -2.12
PTPRD-209ENST00000477552 LCE1BQ5T7P3 118 aa1.81□□□□□ -2.12
PTPRD-209ENST00000477552 MUC5ACP98088 5654 aa1.79□□□□□ -2.12
PTPRD-209ENST00000477552 KRTAP5-10Q6L8G5 202 aa1.77□□□□□ -2.13
PTPRD-209ENST00000477552 KRTAP5-7Q6L8G8 165 aa1.69□□□□□ -2.14
PTPRD-209ENST00000477552 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
PTPRD-209ENST00000477552 AHNAK2Q8IVF2 5795 aa1.52□□□□□ -2.17
PTPRD-209ENST00000477552 KRTAP21-1Q3LI58 79 aa1.42□□□□□ -2.18
PTPRD-209ENST00000477552 MUC5BQ9HC84 5762 aaPredicted RBP1.42□□□□□ -2.18
PTPRD-209ENST00000477552 GPR98Q8WXG9 6306 aa1.31□□□□□ -2.2
PTPRD-209ENST00000477552 PHGR1C9JFL3 82 aa1.31□□□□□ -2.2
PTPRD-209ENST00000477552 MUC19Q7Z5P9 8384 aa1.23□□□□□ -2.21
PTPRD-209ENST00000477552 AHNAKQ09666 5890 aaKnown RBP1.12□□□□□ -2.23
PTPRD-209ENST00000477552 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 70 ms