RNA–Protein interactions for RNA: ENST00000477440.6

ARHGEF3-208, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene ARHGEF3, Length 587 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-208ENST00000477440 K7ERS5 55 aa9.07□□□□□ -0.96
ARHGEF3-208ENST00000477440 MT1LQ93083 61 aa9.06□□□□□ -0.96
ARHGEF3-208ENST00000477440 DSTQ03001 7570 aaKnown RBP9.03□□□□□ -0.96
ARHGEF3-208ENST00000477440 RPS28P62857 69 aaKnown RBP9.01□□□□□ -0.97
ARHGEF3-208ENST00000477440 A6NED7 52 aa9□□□□□ -0.97
ARHGEF3-208ENST00000477440 PP632Q6XCG6 107 aa8.99□□□□□ -0.97
ARHGEF3-208ENST00000477440 MT1MQ8N339 61 aa8.97□□□□□ -0.97
ARHGEF3-208ENST00000477440 KRTAP25-1Q3LHN0 102 aa8.95□□□□□ -0.98
ARHGEF3-208ENST00000477440 KRTAP12-3P60328 96 aa8.9□□□□□ -0.98
ARHGEF3-208ENST00000477440 KRTAP4-3Q9BYR4 195 aa8.78□□□□□ -1
ARHGEF3-208ENST00000477440 KRTAP4-7Q9BYR0 210 aa8.66□□□□□ -1.02
ARHGEF3-208ENST00000477440 CDC42SE1Q9NRR8 79 aa8.66□□□□□ -1.02
ARHGEF3-208ENST00000477440 KRTAP4-9Q9BYQ8 210 aa8.62□□□□□ -1.03
ARHGEF3-208ENST00000477440 KRTAP23-1A1A580 65 aa8.6□□□□□ -1.03
ARHGEF3-208ENST00000477440 ROMO1P60602 79 aa8.54□□□□□ -1.04
ARHGEF3-208ENST00000477440 LCE4AQ5TA78 99 aa8.48□□□□□ -1.05
ARHGEF3-208ENST00000477440 LCE1DQ5T752 114 aa8.45□□□□□ -1.06
ARHGEF3-208ENST00000477440 MT4P47944 62 aa8.39□□□□□ -1.07
ARHGEF3-208ENST00000477440 KRTAP15-1Q3LI76 137 aa8.39□□□□□ -1.07
ARHGEF3-208ENST00000477440 KRTAP5-4Q6L8H1 288 aa8.39□□□□□ -1.07
ARHGEF3-208ENST00000477440 KRTAP19-4Q3LI73 84 aa8.33□□□□□ -1.08
ARHGEF3-208ENST00000477440 HMCN1Q96RW7 5635 aa8.29□□□□□ -1.08
ARHGEF3-208ENST00000477440 LCE3CQ5T5A8 94 aa8.21□□□□□ -1.1
ARHGEF3-208ENST00000477440 KRTAP5-5Q701N2 237 aaPredicted RBP8.2□□□□□ -1.1
ARHGEF3-208ENST00000477440 LOC100996750A0A140TA64 210 aa8.19□□□□□ -1.1
ARHGEF3-208ENST00000477440 KRTAP4-6Q9BYQ5 205 aa8.19□□□□□ -1.1
ARHGEF3-208ENST00000477440 GPR98Q8WXG9 6306 aa8.08□□□□□ -1.12
ARHGEF3-208ENST00000477440 BRK1Q8WUW1 75 aa7.99□□□□□ -1.13
ARHGEF3-208ENST00000477440 SYNE1Q8NF91 8797 aaKnown RBP7.91□□□□□ -1.14
ARHGEF3-208ENST00000477440 KRTAP20-2Q3LI61 65 aa7.91□□□□□ -1.14
ARHGEF3-208ENST00000477440 AHNAK2Q8IVF2 5795 aa7.91□□□□□ -1.14
ARHGEF3-208ENST00000477440 SPRR5A0A1B0GTR4 108 aa7.87□□□□□ -1.15
ARHGEF3-208ENST00000477440 KRTAP12-4P60329 112 aa7.87□□□□□ -1.15
ARHGEF3-208ENST00000477440 KRTAP9-6A8MVA2 160 aa7.8□□□□□ -1.16
ARHGEF3-208ENST00000477440 MT1AP04731 61 aa7.71□□□□□ -1.18
ARHGEF3-208ENST00000477440 KRTAP5-10Q6L8G5 202 aa7.71□□□□□ -1.18
ARHGEF3-208ENST00000477440 KRTAP6-1Q3LI64 71 aa7.67□□□□□ -1.18
ARHGEF3-208ENST00000477440 KRTAP5-3Q6L8H2 238 aa7.67□□□□□ -1.18
ARHGEF3-208ENST00000477440 PMAIP1Q13794 54 aa7.49□□□□□ -1.21
ARHGEF3-208ENST00000477440 KRTAP5-2Q701N4 177 aa7.41□□□□□ -1.22
ARHGEF3-208ENST00000477440 KRTAP9-4Q9BYQ2 154 aa7.4□□□□□ -1.22
ARHGEF3-208ENST00000477440 SVIPQ8NHG7 77 aa7.37□□□□□ -1.23
ARHGEF3-208ENST00000477440 KRTAP5-7Q6L8G8 165 aa7.36□□□□□ -1.23
ARHGEF3-208ENST00000477440 KRTAP6-2Q3LI66 62 aa7.26□□□□□ -1.25
ARHGEF3-208ENST00000477440 PRAC1Q96KF2 57 aa7.23□□□□□ -1.25
ARHGEF3-208ENST00000477440 KRTAP4-11Q9BYQ6 195 aa7.15□□□□□ -1.26
ARHGEF3-208ENST00000477440 PRO0628Q9UI54 55 aa7.1□□□□□ -1.27
ARHGEF3-208ENST00000477440 MT3P25713 68 aa7.01□□□□□ -1.29
ARHGEF3-208ENST00000477440 KRTAP5-8O75690 187 aa6.92□□□□□ -1.3
ARHGEF3-208ENST00000477440 OBSCNQ5VST9 7968 aa6.91□□□□□ -1.3
ARHGEF3-208ENST00000477440 KTN1-AS1Q86SY8 53 aa6.77□□□□□ -1.33
ARHGEF3-208ENST00000477440 KRTAP5-1Q6L8H4 278 aa6.59□□□□□ -1.35
ARHGEF3-208ENST00000477440 H3BS24 57 aa6.5□□□□□ -1.37
ARHGEF3-208ENST00000477440 KRTAP9-9Q9BYP9 154 aa6.47□□□□□ -1.37
ARHGEF3-208ENST00000477440 MUC5ACP98088 5654 aa6.45□□□□□ -1.38
ARHGEF3-208ENST00000477440 MUC5BQ9HC84 5762 aaPredicted RBP6.44□□□□□ -1.38
ARHGEF3-208ENST00000477440 AHNAKQ09666 5890 aaKnown RBP6.37□□□□□ -1.39
ARHGEF3-208ENST00000477440 LCE1EQ5T753 118 aa6.36□□□□□ -1.39
ARHGEF3-208ENST00000477440 KRTAP4-2Q9BYR5 136 aa6.04□□□□□ -1.44
ARHGEF3-208ENST00000477440 LCE1BQ5T7P3 118 aa6.01□□□□□ -1.45
ARHGEF3-208ENST00000477440 LUZP6Q538Z0 58 aa5.99□□□□□ -1.45
ARHGEF3-208ENST00000477440 LCE3DQ9BYE3 92 aa5.96□□□□□ -1.46
ARHGEF3-208ENST00000477440 LCE1CQ5T751 118 aa5.92□□□□□ -1.46
ARHGEF3-208ENST00000477440 A0A0A0MQY5 61 aa5.66□□□□□ -1.5
ARHGEF3-208ENST00000477440 LCE3EQ5T5B0 92 aa5.65□□□□□ -1.5
ARHGEF3-208ENST00000477440 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.42□□□□□ -1.54
ARHGEF3-208ENST00000477440 KRTAP4-12Q9BQ66 201 aa5.39□□□□□ -1.55
ARHGEF3-208ENST00000477440 KRTAP5-11Q6L8G4 156 aa5.36□□□□□ -1.55
ARHGEF3-208ENST00000477440 LCE1FQ5T754 118 aa5.11□□□□□ -1.59
ARHGEF3-208ENST00000477440 KRTAP21-2Q3LI59 83 aa5.04□□□□□ -1.6
ARHGEF3-208ENST00000477440 NDUFAF8A1L188 74 aa5.03□□□□□ -1.6
ARHGEF3-208ENST00000477440 PHGR1C9JFL3 82 aa4.62□□□□□ -1.67
ARHGEF3-208ENST00000477440 KRTAP4-4Q9BYR3 166 aa4.6□□□□□ -1.67
ARHGEF3-208ENST00000477440 PRM1P04553 51 aa4.41□□□□□ -1.7
ARHGEF3-208ENST00000477440 MUC19Q7Z5P9 8384 aa4.25□□□□□ -1.73
ARHGEF3-208ENST00000477440 INE1O15225 51 aa4.01□□□□□ -1.77
ARHGEF3-208ENST00000477440 KRTAP21-1Q3LI58 79 aa3.36□□□□□ -1.87
ARHGEF3-208ENST00000477440 MUC16Q8WXI7 14507 aa2.97□□□□□ -1.93
Retrieved 78 of 20,778 RNA–protein pairs in 80.4 ms