RNA–Protein interactions for RNA: ENST00000477434.5

PDZRN3-206, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 4

Gene PDZRN3, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-206ENST00000477434 H0YAA0 97 aa1.77□□□□□ -2.13
PDZRN3-206ENST00000477434 KRTAP5-10Q6L8G5 202 aa1.77□□□□□ -2.13
PDZRN3-206ENST00000477434 SERP1Q9Y6X1 66 aa1.77□□□□□ -2.13
PDZRN3-206ENST00000477434 RPS28P62857 69 aaKnown RBP1.76□□□□□ -2.13
PDZRN3-206ENST00000477434 DSTQ03001 7570 aaKnown RBP1.75□□□□□ -2.13
PDZRN3-206ENST00000477434 MT1BP07438 61 aa1.74□□□□□ -2.13
PDZRN3-206ENST00000477434 SPRR2EP22531 72 aa1.74□□□□□ -2.13
PDZRN3-206ENST00000477434 SPRR2BP35325 72 aa1.74□□□□□ -2.13
PDZRN3-206ENST00000477434 SPRR2AP35326 72 aa1.74□□□□□ -2.13
PDZRN3-206ENST00000477434 ADM2Q7Z4H4 148 aa1.74□□□□□ -2.13
PDZRN3-206ENST00000477434 CRIPTQ9P021 101 aa1.73□□□□□ -2.13
PDZRN3-206ENST00000477434 SMIM26A0A096LP01 95 aa1.72□□□□□ -2.13
PDZRN3-206ENST00000477434 P0C880 135 aa1.72□□□□□ -2.13
PDZRN3-206ENST00000477434 SEC61GP60059 68 aa1.72□□□□□ -2.13
PDZRN3-206ENST00000477434 LINC01558Q9Y6Z2 57 aa1.72□□□□□ -2.13
PDZRN3-206ENST00000477434 A0A1B0GU69 56 aa1.71□□□□□ -2.14
PDZRN3-206ENST00000477434 Q1T7F1 81 aa1.71□□□□□ -2.14
PDZRN3-206ENST00000477434 SPRR2GQ9BYE4 73 aa1.7□□□□□ -2.14
PDZRN3-206ENST00000477434 V9GYY9 64 aa1.7□□□□□ -2.14
PDZRN3-206ENST00000477434 M0QZ58 72 aa1.69□□□□□ -2.14
PDZRN3-206ENST00000477434 SPRR2DP22532 72 aa1.69□□□□□ -2.14
PDZRN3-206ENST00000477434 PRR15LQ9BU68 103 aa1.69□□□□□ -2.14
PDZRN3-206ENST00000477434 R4GN34 69 aa1.69□□□□□ -2.14
PDZRN3-206ENST00000477434 A0A1B0GU33 70 aa1.68□□□□□ -2.14
PDZRN3-206ENST00000477434 KRTAP12-4P60329 112 aa1.67□□□□□ -2.14
PDZRN3-206ENST00000477434 KRTAP19-8Q3LI54 63 aa1.67□□□□□ -2.14
PDZRN3-206ENST00000477434 Q5VV11 94 aa1.67□□□□□ -2.14
PDZRN3-206ENST00000477434 A6NN06 94 aa1.66□□□□□ -2.14
PDZRN3-206ENST00000477434 PSPHP1O15172 72 aa1.66□□□□□ -2.14
PDZRN3-206ENST00000477434 KRTAP13-4Q3LI77 160 aa1.66□□□□□ -2.14
PDZRN3-206ENST00000477434 HMCN1Q96RW7 5635 aa1.66□□□□□ -2.14
PDZRN3-206ENST00000477434 UQCR11O14957 56 aa1.65□□□□□ -2.15
PDZRN3-206ENST00000477434 SPATA8Q6RVD6 105 aa1.65□□□□□ -2.15
PDZRN3-206ENST00000477434 KRTAP12-3P60328 96 aa1.64□□□□□ -2.15
PDZRN3-206ENST00000477434 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
PDZRN3-206ENST00000477434 LINC01554Q52M75 96 aa1.64□□□□□ -2.15
PDZRN3-206ENST00000477434 SPRR2FQ96RM1 72 aa1.64□□□□□ -2.15
PDZRN3-206ENST00000477434 A0A0D9SG42 100 aa1.62□□□□□ -2.15
PDZRN3-206ENST00000477434 MIR22HGQ0VDD5 57 aa1.62□□□□□ -2.15
PDZRN3-206ENST00000477434 PLAC4Q8WY50 150 aa1.62□□□□□ -2.15
PDZRN3-206ENST00000477434 A6NED7 52 aa1.61□□□□□ -2.15
PDZRN3-206ENST00000477434 KRTAP12-1P59990 96 aa1.61□□□□□ -2.15
PDZRN3-206ENST00000477434 MT1XP80297 61 aa1.61□□□□□ -2.15
PDZRN3-206ENST00000477434 AHNAKQ09666 5890 aaKnown RBP1.61□□□□□ -2.15
PDZRN3-206ENST00000477434 MUC5BQ9HC84 5762 aaPredicted RBP1.59□□□□□ -2.15
PDZRN3-206ENST00000477434 SPINT4Q6UDR6 99 aa1.59□□□□□ -2.15
PDZRN3-206ENST00000477434 CDC42SE1Q9NRR8 79 aa1.58□□□□□ -2.16
PDZRN3-206ENST00000477434 PRO2289Q9P1D8 64 aa1.57□□□□□ -2.16
PDZRN3-206ENST00000477434 K7ERS5 55 aa1.56□□□□□ -2.16
PDZRN3-206ENST00000477434 MUC5ACP98088 5654 aa1.55□□□□□ -2.16
PDZRN3-206ENST00000477434 BRK1Q8WUW1 75 aa1.54□□□□□ -2.16
PDZRN3-206ENST00000477434 MT4P47944 62 aa1.53□□□□□ -2.16
PDZRN3-206ENST00000477434 KRTAP8-1Q8IUC2 63 aa1.53□□□□□ -2.16
PDZRN3-206ENST00000477434 C10orf95Q9H7T3 257 aa1.52□□□□□ -2.17
PDZRN3-206ENST00000477434 TNP1P09430 55 aa1.49□□□□□ -2.17
PDZRN3-206ENST00000477434 ROMO1P60602 79 aa1.49□□□□□ -2.17
PDZRN3-206ENST00000477434 KRTAP25-1Q3LHN0 102 aa1.48□□□□□ -2.17
PDZRN3-206ENST00000477434 PRO0628Q9UI54 55 aa1.48□□□□□ -2.17
PDZRN3-206ENST00000477434 PMAIP1Q13794 54 aa1.47□□□□□ -2.17
PDZRN3-206ENST00000477434 KRTAP19-7Q3SYF9 63 aa1.44□□□□□ -2.18
PDZRN3-206ENST00000477434 MT1EP04732 61 aa1.42□□□□□ -2.18
PDZRN3-206ENST00000477434 KRTAP19-5Q3LI72 72 aa1.4□□□□□ -2.19
PDZRN3-206ENST00000477434 KRTAP19-3Q7Z4W3 81 aa1.39□□□□□ -2.19
PDZRN3-206ENST00000477434 KTN1-AS1Q86SY8 53 aa1.38□□□□□ -2.19
PDZRN3-206ENST00000477434 MT1MQ8N339 61 aa1.35□□□□□ -2.19
PDZRN3-206ENST00000477434 SYNE1Q8NF91 8797 aaKnown RBP1.34□□□□□ -2.19
PDZRN3-206ENST00000477434 MT1GP13640 62 aa1.34□□□□□ -2.19
PDZRN3-206ENST00000477434 MT1LQ93083 61 aa1.34□□□□□ -2.19
PDZRN3-206ENST00000477434 KRTAP20-2Q3LI61 65 aa1.3□□□□□ -2.2
PDZRN3-206ENST00000477434 LUZP6Q538Z0 58 aa1.26□□□□□ -2.21
PDZRN3-206ENST00000477434 KRTAP6-1Q3LI64 71 aa1.16□□□□□ -2.22
PDZRN3-206ENST00000477434 MT1AP04731 61 aa1.14□□□□□ -2.23
PDZRN3-206ENST00000477434 KRTAP6-2Q3LI66 62 aa1.11□□□□□ -2.23
PDZRN3-206ENST00000477434 PHGR1C9JFL3 82 aa1.05□□□□□ -2.24
PDZRN3-206ENST00000477434 INE1O15225 51 aa0.88□□□□□ -2.27
PDZRN3-206ENST00000477434 KRTAP21-1Q3LI58 79 aa0.8□□□□□ -2.28
PDZRN3-206ENST00000477434 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
PDZRN3-206ENST00000477434 PRM1P04553 51 aa0.76□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 84.6 ms