RNA–Protein interactions for RNA: ENST00000477424.2

C4A-253, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 303 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-253ENST00000477424 MT1MQ8N339 61 aa6.33□□□□□ -1.4
C4A-253ENST00000477424 MIR22HGQ0VDD5 57 aa6.32□□□□□ -1.4
C4A-253ENST00000477424 DSTQ03001 7570 aaKnown RBP6.3□□□□□ -1.4
C4A-253ENST00000477424 PSPHP1O15172 72 aa6.3□□□□□ -1.4
C4A-253ENST00000477424 PP632Q6XCG6 107 aa6.3□□□□□ -1.4
C4A-253ENST00000477424 KRTAP4-3Q9BYR4 195 aa6.22□□□□□ -1.41
C4A-253ENST00000477424 A6NED7 52 aa6.2□□□□□ -1.42
C4A-253ENST00000477424 KRTAP12-3P60328 96 aa6.19□□□□□ -1.42
C4A-253ENST00000477424 KRTAP4-9Q9BYQ8 210 aa6.19□□□□□ -1.42
C4A-253ENST00000477424 KRTAP25-1Q3LHN0 102 aa6.13□□□□□ -1.43
C4A-253ENST00000477424 K7ERS5 55 aa6.11□□□□□ -1.43
C4A-253ENST00000477424 KRTAP4-7Q9BYR0 210 aa6.11□□□□□ -1.43
C4A-253ENST00000477424 BRK1Q8WUW1 75 aa6.09□□□□□ -1.43
C4A-253ENST00000477424 CDC42SE1Q9NRR8 79 aa6.09□□□□□ -1.43
C4A-253ENST00000477424 LCE1DQ5T752 114 aa6.06□□□□□ -1.44
C4A-253ENST00000477424 GPR98Q8WXG9 6306 aa6.05□□□□□ -1.44
C4A-253ENST00000477424 LCE4AQ5TA78 99 aa6.03□□□□□ -1.44
C4A-253ENST00000477424 MT4P47944 62 aa5.99□□□□□ -1.45
C4A-253ENST00000477424 KRTAP5-4Q6L8H1 288 aa5.98□□□□□ -1.45
C4A-253ENST00000477424 PRO0628Q9UI54 55 aa5.98□□□□□ -1.45
C4A-253ENST00000477424 HMCN1Q96RW7 5635 aa5.88□□□□□ -1.47
C4A-253ENST00000477424 KRTAP23-1A1A580 65 aa5.88□□□□□ -1.47
C4A-253ENST00000477424 KRTAP4-6Q9BYQ5 205 aa5.85□□□□□ -1.47
C4A-253ENST00000477424 KRTAP5-5Q701N2 237 aaPredicted RBP5.81□□□□□ -1.48
C4A-253ENST00000477424 KRTAP15-1Q3LI76 137 aa5.8□□□□□ -1.48
C4A-253ENST00000477424 LOC100996750A0A140TA64 210 aa5.78□□□□□ -1.48
C4A-253ENST00000477424 ROMO1P60602 79 aa5.78□□□□□ -1.48
C4A-253ENST00000477424 PMAIP1Q13794 54 aa5.78□□□□□ -1.48
C4A-253ENST00000477424 KRTAP19-4Q3LI73 84 aa5.75□□□□□ -1.49
C4A-253ENST00000477424 AHNAK2Q8IVF2 5795 aa5.72□□□□□ -1.49
C4A-253ENST00000477424 LCE3CQ5T5A8 94 aa5.71□□□□□ -1.5
C4A-253ENST00000477424 KRTAP20-2Q3LI61 65 aa5.64□□□□□ -1.51
C4A-253ENST00000477424 SPRR5A0A1B0GTR4 108 aa5.58□□□□□ -1.52
C4A-253ENST00000477424 KRTAP5-10Q6L8G5 202 aa5.58□□□□□ -1.52
C4A-253ENST00000477424 KRTAP12-4P60329 112 aa5.55□□□□□ -1.52
C4A-253ENST00000477424 KTN1-AS1Q86SY8 53 aa5.55□□□□□ -1.52
C4A-253ENST00000477424 KRTAP5-3Q6L8H2 238 aa5.48□□□□□ -1.53
C4A-253ENST00000477424 SYNE1Q8NF91 8797 aaKnown RBP5.47□□□□□ -1.53
C4A-253ENST00000477424 KRTAP9-6A8MVA2 160 aa5.45□□□□□ -1.54
C4A-253ENST00000477424 MT1AP04731 61 aa5.42□□□□□ -1.54
C4A-253ENST00000477424 KRTAP6-1Q3LI64 71 aa5.41□□□□□ -1.54
C4A-253ENST00000477424 SVIPQ8NHG7 77 aa5.36□□□□□ -1.55
C4A-253ENST00000477424 KRTAP5-7Q6L8G8 165 aa5.33□□□□□ -1.56
C4A-253ENST00000477424 KRTAP5-2Q701N4 177 aa5.27□□□□□ -1.57
C4A-253ENST00000477424 PRAC1Q96KF2 57 aa5.27□□□□□ -1.57
C4A-253ENST00000477424 KRTAP9-4Q9BYQ2 154 aa5.21□□□□□ -1.58
C4A-253ENST00000477424 KRTAP6-2Q3LI66 62 aa5.13□□□□□ -1.59
C4A-253ENST00000477424 KRTAP4-11Q9BYQ6 195 aa5.11□□□□□ -1.59
C4A-253ENST00000477424 KRTAP5-8O75690 187 aa4.96□□□□□ -1.62
C4A-253ENST00000477424 MT3P25713 68 aa4.91□□□□□ -1.62
C4A-253ENST00000477424 OBSCNQ5VST9 7968 aa4.78□□□□□ -1.64
C4A-253ENST00000477424 AHNAKQ09666 5890 aaKnown RBP4.74□□□□□ -1.65
C4A-253ENST00000477424 KRTAP5-1Q6L8H4 278 aa4.7□□□□□ -1.66
C4A-253ENST00000477424 MUC5BQ9HC84 5762 aaPredicted RBP4.7□□□□□ -1.66
C4A-253ENST00000477424 MUC5ACP98088 5654 aa4.65□□□□□ -1.66
C4A-253ENST00000477424 KRTAP9-9Q9BYP9 154 aa4.63□□□□□ -1.67
C4A-253ENST00000477424 LUZP6Q538Z0 58 aa4.54□□□□□ -1.68
C4A-253ENST00000477424 LCE1EQ5T753 118 aa4.48□□□□□ -1.69
C4A-253ENST00000477424 KRTAP4-2Q9BYR5 136 aa4.29□□□□□ -1.72
C4A-253ENST00000477424 NDUFAF8A1L188 74 aa4.24□□□□□ -1.73
C4A-253ENST00000477424 LCE1BQ5T7P3 118 aa4.24□□□□□ -1.73
C4A-253ENST00000477424 LCE1CQ5T751 118 aa4.17□□□□□ -1.74
C4A-253ENST00000477424 LCE3DQ9BYE3 92 aa4.11□□□□□ -1.75
C4A-253ENST00000477424 A0A0A0MQY5 61 aa3.89□□□□□ -1.79
C4A-253ENST00000477424 LCE3EQ5T5B0 92 aa3.88□□□□□ -1.79
C4A-253ENST00000477424 KRTAP4-12Q9BQ66 201 aa3.85□□□□□ -1.79
C4A-253ENST00000477424 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.83□□□□□ -1.8
C4A-253ENST00000477424 KRTAP5-11Q6L8G4 156 aa3.79□□□□□ -1.8
C4A-253ENST00000477424 H3BS24 57 aa3.66□□□□□ -1.82
C4A-253ENST00000477424 INE1O15225 51 aa3.65□□□□□ -1.83
C4A-253ENST00000477424 LCE1FQ5T754 118 aa3.62□□□□□ -1.83
C4A-253ENST00000477424 KRTAP21-2Q3LI59 83 aa3.56□□□□□ -1.84
C4A-253ENST00000477424 PHGR1C9JFL3 82 aa3.27□□□□□ -1.89
C4A-253ENST00000477424 KRTAP4-4Q9BYR3 166 aa3.26□□□□□ -1.89
C4A-253ENST00000477424 PRM1P04553 51 aa2.99□□□□□ -1.93
C4A-253ENST00000477424 MUC19Q7Z5P9 8384 aa2.93□□□□□ -1.94
C4A-253ENST00000477424 KRTAP21-1Q3LI58 79 aa2.42□□□□□ -2.02
C4A-253ENST00000477424 MUC16Q8WXI7 14507 aa2.12□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 50.1 ms