RNA–Protein interactions for RNA: ENST00000476935.5

GNAS-233, Transcript of GNAS complex locus, human

TSL 3

Gene GNAS, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GNAS-233	ENST00000476935	LCE4A	Q5TA78	99 aa		8.25	□□□□□ -1.09
GNAS-233	ENST00000476935	LCE1D	Q5T752	114 aa		8.23	□□□□□ -1.09
GNAS-233	ENST00000476935	KRTAP4-3	Q9BYR4	195 aa		8.2	□□□□□ -1.1
GNAS-233	ENST00000476935	KRTAP12-3	P60328	96 aa		8.15	□□□□□ -1.1
GNAS-233	ENST00000476935	MT4	P47944	62 aa		8.11	□□□□□ -1.11
GNAS-233	ENST00000476935	MIR22HG	Q0VDD5	57 aa		8.09	□□□□□ -1.11
GNAS-233	ENST00000476935	KRTAP5-4	Q6L8H1	288 aa		8.08	□□□□□ -1.12
GNAS-233	ENST00000476935	GPR98	Q8WXG9	6306 aa		8.08	□□□□□ -1.12
GNAS-233	ENST00000476935	KRTAP25-1	Q3LHN0	102 aa		8.02	□□□□□ -1.13
GNAS-233	ENST00000476935	HMCN1	Q96RW7	5635 aa		8.01	□□□□□ -1.13
GNAS-233	ENST00000476935	KRTAP4-7	Q9BYR0	210 aa		8.01	□□□□□ -1.13
GNAS-233	ENST00000476935		K7ERS5	55 aa		7.96	□□□□□ -1.14
GNAS-233	ENST00000476935		V9GYY9	64 aa		7.95	□□□□□ -1.14
GNAS-233	ENST00000476935	KRTAP4-6	Q9BYQ5	205 aa		7.9	□□□□□ -1.14
GNAS-233	ENST00000476935	PSPHP1	O15172	72 aa		7.87	□□□□□ -1.15
GNAS-233	ENST00000476935		Q1T7F1	81 aa		7.87	□□□□□ -1.15
GNAS-233	ENST00000476935	KRTAP19-4	Q3LI73	84 aa		7.77	□□□□□ -1.17
GNAS-233	ENST00000476935	KRTAP23-1	A1A580	65 aa		7.75	□□□□□ -1.17
GNAS-233	ENST00000476935	AHNAK2	Q8IVF2	5795 aa		7.75	□□□□□ -1.17
GNAS-233	ENST00000476935	KRTAP5-5	Q701N2	237 aa	Predicted RBP	7.74	□□□□□ -1.17
GNAS-233	ENST00000476935	KRTAP5-10	Q6L8G5	202 aa		7.67	□□□□□ -1.18
GNAS-233	ENST00000476935	SVIP	Q8NHG7	77 aa		7.62	□□□□□ -1.19
GNAS-233	ENST00000476935		A6NED7	52 aa		7.61	□□□□□ -1.19
GNAS-233	ENST00000476935	KRTAP20-2	Q3LI61	65 aa		7.61	□□□□□ -1.19
GNAS-233	ENST00000476935	KRTAP15-1	Q3LI76	137 aa		7.61	□□□□□ -1.19
GNAS-233	ENST00000476935	SPRR5	A0A1B0GTR4	108 aa		7.6	□□□□□ -1.19
GNAS-233	ENST00000476935	LOC100996750	A0A140TA64	210 aa		7.58	□□□□□ -1.2
GNAS-233	ENST00000476935	KRTAP12-4	P60329	112 aa		7.57	□□□□□ -1.2
GNAS-233	ENST00000476935	CDC42SE1	Q9NRR8	79 aa		7.52	□□□□□ -1.21
GNAS-233	ENST00000476935	LCE3C	Q5T5A8	94 aa		7.51	□□□□□ -1.21
GNAS-233	ENST00000476935	PCP4	P48539	62 aa		7.49	□□□□□ -1.21
GNAS-233	ENST00000476935	KRTAP5-3	Q6L8H2	238 aa		7.49	□□□□□ -1.21
GNAS-233	ENST00000476935	SYNE1	Q8NF91	8797 aa	Known RBP	7.4	□□□□□ -1.22
GNAS-233	ENST00000476935	ROMO1	P60602	79 aa		7.4	□□□□□ -1.22
GNAS-233	ENST00000476935	RPS28	P62857	69 aa	Known RBP	7.4	□□□□□ -1.22
GNAS-233	ENST00000476935	KRTAP5-7	Q6L8G8	165 aa		7.39	□□□□□ -1.23
GNAS-233	ENST00000476935	MT1A	P04731	61 aa		7.2	□□□□□ -1.26
GNAS-233	ENST00000476935	KRTAP6-1	Q3LI64	71 aa		7.14	□□□□□ -1.27
GNAS-233	ENST00000476935	KRTAP5-2	Q701N4	177 aa		7.07	□□□□□ -1.28
GNAS-233	ENST00000476935	KRTAP9-6	A8MVA2	160 aa		7.06	□□□□□ -1.28
GNAS-233	ENST00000476935	KRTAP9-4	Q9BYQ2	154 aa		6.97	□□□□□ -1.29
GNAS-233	ENST00000476935	KRTAP4-11	Q9BYQ6	195 aa		6.97	□□□□□ -1.29
GNAS-233	ENST00000476935	KRTAP6-2	Q3LI66	62 aa		6.83	□□□□□ -1.32
GNAS-233	ENST00000476935	KRTAP5-8	O75690	187 aa		6.73	□□□□□ -1.33
GNAS-233	ENST00000476935	MT3	P25713	68 aa		6.6	□□□□□ -1.35
GNAS-233	ENST00000476935	OBSCN	Q5VST9	7968 aa		6.51	□□□□□ -1.37
GNAS-233	ENST00000476935	BRK1	Q8WUW1	75 aa		6.42	□□□□□ -1.38
GNAS-233	ENST00000476935	KRTAP9-9	Q9BYP9	154 aa		6.4	□□□□□ -1.38
GNAS-233	ENST00000476935	MUC5B	Q9HC84	5762 aa	Predicted RBP	6.37	□□□□□ -1.39
GNAS-233	ENST00000476935	KRTAP5-1	Q6L8H4	278 aa		6.35	□□□□□ -1.39
GNAS-233	ENST00000476935	MUC5AC	P98088	5654 aa		6.33	□□□□□ -1.4
GNAS-233	ENST00000476935	AHNAK	Q09666	5890 aa	Known RBP	6.33	□□□□□ -1.4
GNAS-233	ENST00000476935	PRO0628	Q9UI54	55 aa		6.21	□□□□□ -1.42
GNAS-233	ENST00000476935	LCE1E	Q5T753	118 aa		6.09	□□□□□ -1.43
GNAS-233	ENST00000476935	PMAIP1	Q13794	54 aa		6.05	□□□□□ -1.44
GNAS-233	ENST00000476935	PRAC1	Q96KF2	57 aa		5.82	□□□□□ -1.48
GNAS-233	ENST00000476935	KRTAP4-2	Q9BYR5	136 aa		5.73	□□□□□ -1.49
GNAS-233	ENST00000476935	LCE1B	Q5T7P3	118 aa		5.69	□□□□□ -1.5
GNAS-233	ENST00000476935	LCE1C	Q5T751	118 aa		5.64	□□□□□ -1.51
GNAS-233	ENST00000476935	KTN1-AS1	Q86SY8	53 aa		5.64	□□□□□ -1.51
GNAS-233	ENST00000476935	LCE3D	Q9BYE3	92 aa		5.41	□□□□□ -1.54
GNAS-233	ENST00000476935		H3BS24	57 aa		5.36	□□□□□ -1.55
GNAS-233	ENST00000476935	KRTAP4-12	Q9BQ66	201 aa		5.17	□□□□□ -1.58
GNAS-233	ENST00000476935	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	5.14	□□□□□ -1.59
GNAS-233	ENST00000476935	KRTAP5-11	Q6L8G4	156 aa		5.11	□□□□□ -1.59
GNAS-233	ENST00000476935	LCE3E	Q5T5B0	92 aa		5.08	□□□□□ -1.6
GNAS-233	ENST00000476935	LCE1F	Q5T754	118 aa		5	□□□□□ -1.61
GNAS-233	ENST00000476935	LUZP6	Q538Z0	58 aa		4.98	□□□□□ -1.61
GNAS-233	ENST00000476935		A0A0A0MQY5	61 aa		4.75	□□□□□ -1.65
GNAS-233	ENST00000476935	KRTAP21-2	Q3LI59	83 aa		4.72	□□□□□ -1.65
GNAS-233	ENST00000476935	NDUFAF8	A1L188	74 aa		4.48	□□□□□ -1.69
GNAS-233	ENST00000476935	PHGR1	C9JFL3	82 aa		4.45	□□□□□ -1.7
GNAS-233	ENST00000476935	KRTAP4-4	Q9BYR3	166 aa		4.29	□□□□□ -1.72
GNAS-233	ENST00000476935	MUC19	Q7Z5P9	8384 aa		4.04	□□□□□ -1.76
GNAS-233	ENST00000476935	INE1	O15225	51 aa		3.89	□□□□□ -1.79
GNAS-233	ENST00000476935	PRM1	P04553	51 aa		3.75	□□□□□ -1.81
GNAS-233	ENST00000476935	KRTAP21-1	Q3LI58	79 aa		3.41	□□□□□ -1.86
GNAS-233	ENST00000476935	MUC16	Q8WXI7	14507 aa		2.88	□□□□□ -1.95

Retrieved 78 of 20,778 RNA–protein pairs in 6.3 ms