RNA–Protein interactions for RNA: ENST00000476784.5

TTC3-215, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 7,425 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-215ENST00000476784 LCE1CQ5T751 118 aa2.19□□□□□ -2.06
TTC3-215ENST00000476784 LCE1EQ5T753 118 aa2.19□□□□□ -2.06
TTC3-215ENST00000476784 LCE1FQ5T754 118 aa2.19□□□□□ -2.06
TTC3-215ENST00000476784 LCE1AQ5T7P2 110 aa2.19□□□□□ -2.06
TTC3-215ENST00000476784 KRTAP19-8Q3LI54 63 aa2.19□□□□□ -2.06
TTC3-215ENST00000476784 KRTAP19-6Q3LI70 58 aa2.19□□□□□ -2.06
TTC3-215ENST00000476784 FAT3Q8TDW7 4589 aa2.18□□□□□ -2.06
TTC3-215ENST00000476784 MT1BP07438 61 aa2.16□□□□□ -2.06
TTC3-215ENST00000476784 KRTAP9-8Q9BYQ0 159 aa2.16□□□□□ -2.06
TTC3-215ENST00000476784 LPAP08519 4548 aa2.14□□□□□ -2.07
TTC3-215ENST00000476784 KRTAP4-7Q9BYR0 210 aa2.13□□□□□ -2.07
TTC3-215ENST00000476784 KRTAP9-3Q9BYQ3 159 aa2.13□□□□□ -2.07
TTC3-215ENST00000476784 LRP2P98164 4655 aa2.12□□□□□ -2.07
TTC3-215ENST00000476784 HMCN2Q8NDA2 5059 aa2.12□□□□□ -2.07
TTC3-215ENST00000476784 KRTAP4-9Q9BYQ8 210 aa2.12□□□□□ -2.07
TTC3-215ENST00000476784 FAT4Q6V0I7 4981 aa2.09□□□□□ -2.07
TTC3-215ENST00000476784 KRTAP2-3P0C7H8 128 aa2.08□□□□□ -2.08
TTC3-215ENST00000476784 KRTAP2-4Q9BYR9 128 aa2.08□□□□□ -2.08
TTC3-215ENST00000476784 LOC100996750A0A140TA64 210 aa2.06□□□□□ -2.08
TTC3-215ENST00000476784 PRM1P04553 51 aa2.06□□□□□ -2.08
TTC3-215ENST00000476784 MT1LQ93083 61 aa2.05□□□□□ -2.08
TTC3-215ENST00000476784 KRTAP4-3Q9BYR4 195 aa2.04□□□□□ -2.08
TTC3-215ENST00000476784 MT1EP04732 61 aa2.04□□□□□ -2.08
TTC3-215ENST00000476784 MT1MQ8N339 61 aa2.03□□□□□ -2.08
TTC3-215ENST00000476784 KRTAP2-2Q9BYT5 123 aa1.98□□□□□ -2.09
TTC3-215ENST00000476784 KRTAP2-1Q9BYU5 128 aa1.98□□□□□ -2.09
TTC3-215ENST00000476784 MUC17Q685J3 4493 aa1.98□□□□□ -2.09
TTC3-215ENST00000476784 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.97□□□□□ -2.09
TTC3-215ENST00000476784 FLGP20930 4061 aaPredicted RBP1.96□□□□□ -2.1
TTC3-215ENST00000476784 KRTAP6-3Q3LI67 103 aa1.94□□□□□ -2.1
TTC3-215ENST00000476784 KRTAP9-9Q9BYP9 154 aa1.94□□□□□ -2.1
TTC3-215ENST00000476784 USH2AO75445 5202 aa1.93□□□□□ -2.1
TTC3-215ENST00000476784 LCE4AQ5TA78 99 aa1.91□□□□□ -2.1
TTC3-215ENST00000476784 SYNE1Q8NF91 8797 aaKnown RBP1.9□□□□□ -2.11
TTC3-215ENST00000476784 KMT2DO14686 5537 aa1.89□□□□□ -2.11
TTC3-215ENST00000476784 KRTAP6-2Q3LI66 62 aa1.87□□□□□ -2.11
TTC3-215ENST00000476784 NEBP20929 6669 aa1.87□□□□□ -2.11
TTC3-215ENST00000476784 MACF1Q9UPN3 7388 aaKnown RBP1.86□□□□□ -2.11
TTC3-215ENST00000476784 MT1AP04731 61 aa1.86□□□□□ -2.11
TTC3-215ENST00000476784 KRTAP19-2Q3LHN2 52 aa1.84□□□□□ -2.12
TTC3-215ENST00000476784 GPR98Q8WXG9 6306 aa1.79□□□□□ -2.12
TTC3-215ENST00000476784 MDN1Q9NU22 5596 aa1.78□□□□□ -2.12
TTC3-215ENST00000476784 OBSCNQ5VST9 7968 aa1.77□□□□□ -2.13
TTC3-215ENST00000476784 KRTAP9-4Q9BYQ2 154 aa1.77□□□□□ -2.13
TTC3-215ENST00000476784 KRTAP6-1Q3LI64 71 aa1.75□□□□□ -2.13
TTC3-215ENST00000476784 KRTAP20-2Q3LI61 65 aa1.74□□□□□ -2.13
TTC3-215ENST00000476784 DSTQ03001 7570 aaKnown RBP1.74□□□□□ -2.13
TTC3-215ENST00000476784 SSPOA2VEC9 5147 aa1.73□□□□□ -2.13
TTC3-215ENST00000476784 KRTAP19-7Q3SYF9 63 aa1.7□□□□□ -2.14
TTC3-215ENST00000476784 FCGBPQ9Y6R7 5405 aaPredicted RBP1.67□□□□□ -2.14
TTC3-215ENST00000476784 KRTAP4-6Q9BYQ5 205 aa1.67□□□□□ -2.14
TTC3-215ENST00000476784 KRTAP4-12Q9BQ66 201 aa1.65□□□□□ -2.15
TTC3-215ENST00000476784 KRTAP4-2Q9BYR5 136 aa1.65□□□□□ -2.15
TTC3-215ENST00000476784 KRTAP4-4Q9BYR3 166 aa1.61□□□□□ -2.15
TTC3-215ENST00000476784 KRTAP5-2Q701N4 177 aa1.6□□□□□ -2.15
TTC3-215ENST00000476784 KRTAP4-11Q9BYQ6 195 aa1.55□□□□□ -2.16
TTC3-215ENST00000476784 MUC12Q9UKN1 5478 aa1.53□□□□□ -2.17
TTC3-215ENST00000476784 KRTAP5-3Q6L8H2 238 aa1.52□□□□□ -2.17
TTC3-215ENST00000476784 MUC19Q7Z5P9 8384 aa1.51□□□□□ -2.17
TTC3-215ENST00000476784 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.5□□□□□ -2.17
TTC3-215ENST00000476784 KRTAP9-6A8MVA2 160 aa1.5□□□□□ -2.17
TTC3-215ENST00000476784 MUC5BQ9HC84 5762 aaPredicted RBP1.47□□□□□ -2.17
TTC3-215ENST00000476784 AHNAK2Q8IVF2 5795 aa1.41□□□□□ -2.18
TTC3-215ENST00000476784 PHGR1C9JFL3 82 aa1.35□□□□□ -2.19
TTC3-215ENST00000476784 KRTAP5-9P26371 169 aa1.35□□□□□ -2.19
TTC3-215ENST00000476784 HMCN1Q96RW7 5635 aa1.35□□□□□ -2.19
TTC3-215ENST00000476784 KRTAP5-5Q701N2 237 aaPredicted RBP1.34□□□□□ -2.19
TTC3-215ENST00000476784 KRTAP5-4Q6L8H1 288 aa1.33□□□□□ -2.2
TTC3-215ENST00000476784 MUC5ACP98088 5654 aa1.28□□□□□ -2.2
TTC3-215ENST00000476784 AHNAKQ09666 5890 aaKnown RBP1.25□□□□□ -2.21
TTC3-215ENST00000476784 KRTAP5-8O75690 187 aa1.16□□□□□ -2.22
TTC3-215ENST00000476784 KRTAP5-1Q6L8H4 278 aa0.95□□□□□ -2.26
TTC3-215ENST00000476784 KRTAP5-10Q6L8G5 202 aa0.93□□□□□ -2.26
TTC3-215ENST00000476784 KRTAP5-7Q6L8G8 165 aa0.9□□□□□ -2.27
TTC3-215ENST00000476784 KRTAP21-1Q3LI58 79 aa0.87□□□□□ -2.27
TTC3-215ENST00000476784 KRTAP5-11Q6L8G4 156 aa0.83□□□□□ -2.28
TTC3-215ENST00000476784 KRTAP21-2Q3LI59 83 aa0.82□□□□□ -2.28
TTC3-215ENST00000476784 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 6.8 ms