RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 KRTAP12-4P60329 112 aa3.77□□□□□ -1.81
BRCA1-213ENST00000476777 SCGB1A1P11684 91 aa3.76□□□□□ -1.81
BRCA1-213ENST00000476777 LCE3AQ5TA76 89 aa3.76□□□□□ -1.81
BRCA1-213ENST00000476777 SPINT4Q6UDR6 99 aa3.75□□□□□ -1.81
BRCA1-213ENST00000476777 KRTAP4-4Q9BYR3 166 aa3.72□□□□□ -1.81
BRCA1-213ENST00000476777 KRTAP12-1P59990 96 aa3.7□□□□□ -1.82
BRCA1-213ENST00000476777 SPATA8Q6RVD6 105 aa3.7□□□□□ -1.82
BRCA1-213ENST00000476777 SYNE1Q8NF91 8797 aaKnown RBP3.7□□□□□ -1.82
BRCA1-213ENST00000476777 AHNAKQ09666 5890 aaKnown RBP3.7□□□□□ -1.82
BRCA1-213ENST00000476777 MUC5BQ9HC84 5762 aaPredicted RBP3.67□□□□□ -1.82
BRCA1-213ENST00000476777 MUC5ACP98088 5654 aa3.65□□□□□ -1.83
BRCA1-213ENST00000476777 TNP1P09430 55 aa3.62□□□□□ -1.83
BRCA1-213ENST00000476777 KRTAP12-3P60328 96 aa3.61□□□□□ -1.83
BRCA1-213ENST00000476777 SERP1Q9Y6X1 66 aa3.59□□□□□ -1.83
BRCA1-213ENST00000476777 A0A1B0GU33 70 aa3.58□□□□□ -1.84
BRCA1-213ENST00000476777 KRTAP5-8O75690 187 aa3.58□□□□□ -1.84
BRCA1-213ENST00000476777 SEC61GP60059 68 aa3.58□□□□□ -1.84
BRCA1-213ENST00000476777 SPANXA2-OT1Q8N9U9 137 aa3.58□□□□□ -1.84
BRCA1-213ENST00000476777 PCP4L1A6NKN8 68 aa3.57□□□□□ -1.84
BRCA1-213ENST00000476777 SNURFQ9Y675 71 aa3.57□□□□□ -1.84
BRCA1-213ENST00000476777 KRTAP5-2Q701N4 177 aa3.55□□□□□ -1.84
BRCA1-213ENST00000476777 SMIM20Q8N5G0 67 aa3.55□□□□□ -1.84
BRCA1-213ENST00000476777 KRTAP9-6A8MVA2 160 aa3.52□□□□□ -1.85
BRCA1-213ENST00000476777 COA5Q86WW8 74 aa3.51□□□□□ -1.85
BRCA1-213ENST00000476777 A8MU10 97 aa3.48□□□□□ -1.85
BRCA1-213ENST00000476777 MT3P25713 68 aa3.48□□□□□ -1.85
BRCA1-213ENST00000476777 SMIM26A0A096LP01 95 aa3.47□□□□□ -1.85
BRCA1-213ENST00000476777 J3QR89 54 aa3.46□□□□□ -1.86
BRCA1-213ENST00000476777 PCP4P48539 62 aa3.41□□□□□ -1.86
BRCA1-213ENST00000476777 KRTAP6-1Q3LI64 71 aa3.41□□□□□ -1.86
BRCA1-213ENST00000476777 OBSCNQ5VST9 7968 aa3.4□□□□□ -1.86
BRCA1-213ENST00000476777 A0A0A0MQY5 61 aa3.4□□□□□ -1.87
BRCA1-213ENST00000476777 MT1AP04731 61 aa3.39□□□□□ -1.87
BRCA1-213ENST00000476777 A0A1B0GV90 55 aa3.35□□□□□ -1.87
BRCA1-213ENST00000476777 A0A1B0GU69 56 aa3.33□□□□□ -1.88
BRCA1-213ENST00000476777 KRTAP6-2Q3LI66 62 aa3.33□□□□□ -1.88
BRCA1-213ENST00000476777 SERP2Q8N6R1 65 aa3.33□□□□□ -1.88
BRCA1-213ENST00000476777 SVIPQ8NHG7 77 aa3.32□□□□□ -1.88
BRCA1-213ENST00000476777 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
BRCA1-213ENST00000476777 LCE3CQ5T5A8 94 aa3.29□□□□□ -1.88
BRCA1-213ENST00000476777 KRTAP25-1Q3LHN0 102 aa3.26□□□□□ -1.89
BRCA1-213ENST00000476777 H7BZZ5 65 aa3.15□□□□□ -1.91
BRCA1-213ENST00000476777 K7ERU9 68 aa3.13□□□□□ -1.91
BRCA1-213ENST00000476777 PRR15LQ9BU68 103 aa3.1□□□□□ -1.91
BRCA1-213ENST00000476777 COX7CP15954 63 aa3.07□□□□□ -1.92
BRCA1-213ENST00000476777 UQCR11O14957 56 aa2.99□□□□□ -1.93
BRCA1-213ENST00000476777 LINC01558Q9Y6Z2 57 aa2.99□□□□□ -1.93
BRCA1-213ENST00000476777 K7ERS5 55 aa2.89□□□□□ -1.95
BRCA1-213ENST00000476777 MIR22HGQ0VDD5 57 aa2.89□□□□□ -1.95
BRCA1-213ENST00000476777 LCE3EQ5T5B0 92 aa2.86□□□□□ -1.95
BRCA1-213ENST00000476777 NDUFAF8A1L188 74 aa2.82□□□□□ -1.96
BRCA1-213ENST00000476777 LCE1BQ5T7P3 118 aa2.81□□□□□ -1.96
BRCA1-213ENST00000476777 RPS28P62857 69 aaKnown RBP2.8□□□□□ -1.96
BRCA1-213ENST00000476777 PRAC1Q96KF2 57 aa2.79□□□□□ -1.96
BRCA1-213ENST00000476777 ATP5EP56381 51 aaPredicted RBP2.78□□□□□ -1.96
BRCA1-213ENST00000476777 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
BRCA1-213ENST00000476777 ANAPC13Q9BS18 74 aa2.72□□□□□ -1.97
BRCA1-213ENST00000476777 CCDC179H3BU77 68 aa2.71□□□□□ -1.98
BRCA1-213ENST00000476777 CDC42SE1Q9NRR8 79 aa2.7□□□□□ -1.98
BRCA1-213ENST00000476777 Q1T7F1 81 aa2.67□□□□□ -1.98
BRCA1-213ENST00000476777 ROMO1P60602 79 aa2.63□□□□□ -1.99
BRCA1-213ENST00000476777 PSPHP1O15172 72 aa2.61□□□□□ -1.99
BRCA1-213ENST00000476777 TMEM258P61165 79 aa2.55□□□□□ -2
BRCA1-213ENST00000476777 PHGR1C9JFL3 82 aa2.5□□□□□ -2.01
BRCA1-213ENST00000476777 V9GYY9 64 aa2.5□□□□□ -2.01
BRCA1-213ENST00000476777 A6NED7 52 aa2.47□□□□□ -2.01
BRCA1-213ENST00000476777 LCE3DQ9BYE3 92 aa2.28□□□□□ -2.04
BRCA1-213ENST00000476777 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
BRCA1-213ENST00000476777 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
BRCA1-213ENST00000476777 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
BRCA1-213ENST00000476777 BRK1Q8WUW1 75 aa1.63□□□□□ -2.15
BRCA1-213ENST00000476777 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
BRCA1-213ENST00000476777 PMAIP1Q13794 54 aa1.48□□□□□ -2.17
BRCA1-213ENST00000476777 LUZP6Q538Z0 58 aa1.37□□□□□ -2.19
BRCA1-213ENST00000476777 PRM1P04553 51 aa1.33□□□□□ -2.2
BRCA1-213ENST00000476777 PRO0628Q9UI54 55 aa1.12□□□□□ -2.23
BRCA1-213ENST00000476777 KTN1-AS1Q86SY8 53 aa1.01□□□□□ -2.25
BRCA1-213ENST00000476777 INE1O15225 51 aa0.62□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 12.5 ms