RNA–Protein interactions for RNA: ENST00000476464.5

PSMD6-206, Transcript of proteasome 26S subunit, non-ATPase 6, humanhuman

TSL 2

Gene PSMD6, Length 2,052 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD6-206ENST00000476464 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.8□□□□□ -1.48
PSMD6-206ENST00000476464 KRTAP19-4Q3LI73 84 aa5.76□□□□□ -1.49
PSMD6-206ENST00000476464 KRTAP9-6A8MVA2 160 aa5.74□□□□□ -1.49
PSMD6-206ENST00000476464 KRTAP9-7A8MTY7 169 aa5.7□□□□□ -1.5
PSMD6-206ENST00000476464 LOC100996750A0A140TA64 210 aa5.67□□□□□ -1.5
PSMD6-206ENST00000476464 KRTAP4-6Q9BYQ5 205 aa5.67□□□□□ -1.5
PSMD6-206ENST00000476464 MUC12Q9UKN1 5478 aa5.64□□□□□ -1.51
PSMD6-206ENST00000476464 MACF1Q9UPN3 7388 aaKnown RBP5.59□□□□□ -1.51
PSMD6-206ENST00000476464 KRTAP19-3Q7Z4W3 81 aa5.57□□□□□ -1.52
PSMD6-206ENST00000476464 SPRR2FQ96RM1 72 aa5.55□□□□□ -1.52
PSMD6-206ENST00000476464 KRTAP4-3Q9BYR4 195 aa5.54□□□□□ -1.52
PSMD6-206ENST00000476464 MT1GP13640 62 aa5.53□□□□□ -1.52
PSMD6-206ENST00000476464 MT1MQ8N339 61 aa5.52□□□□□ -1.53
PSMD6-206ENST00000476464 KRTAP6-3Q3LI67 103 aa5.52□□□□□ -1.53
PSMD6-206ENST00000476464 SYNE2Q8WXH0 6885 aaKnown RBP5.49□□□□□ -1.53
PSMD6-206ENST00000476464 KRTAP2-3P0C7H8 128 aa5.41□□□□□ -1.54
PSMD6-206ENST00000476464 LCE5AQ5TCM9 118 aa5.41□□□□□ -1.54
PSMD6-206ENST00000476464 KRTAP2-4Q9BYR9 128 aa5.41□□□□□ -1.54
PSMD6-206ENST00000476464 KRTAP2-1Q9BYU5 128 aa5.41□□□□□ -1.54
PSMD6-206ENST00000476464 INE1O15225 51 aa5.37□□□□□ -1.55
PSMD6-206ENST00000476464 DSTQ03001 7570 aaKnown RBP5.31□□□□□ -1.56
PSMD6-206ENST00000476464 KRTAP5-9P26371 169 aa5.3□□□□□ -1.56
PSMD6-206ENST00000476464 MDN1Q9NU22 5596 aa5.29□□□□□ -1.56
PSMD6-206ENST00000476464 LCE1AQ5T7P2 110 aa5.2□□□□□ -1.58
PSMD6-206ENST00000476464 NEBP20929 6669 aa5.17□□□□□ -1.58
PSMD6-206ENST00000476464 SPRR2EP22531 72 aa5.14□□□□□ -1.59
PSMD6-206ENST00000476464 SPRR2BP35325 72 aa5.14□□□□□ -1.59
PSMD6-206ENST00000476464 SPRR2AP35326 72 aa5.14□□□□□ -1.59
PSMD6-206ENST00000476464 KRTAP20-1Q3LI63 56 aa5.04□□□□□ -1.6
PSMD6-206ENST00000476464 LCE3BQ5TA77 95 aa4.96□□□□□ -1.62
PSMD6-206ENST00000476464 KRTAP6-1Q3LI64 71 aa4.95□□□□□ -1.62
PSMD6-206ENST00000476464 SPRR2DP22532 72 aa4.94□□□□□ -1.62
PSMD6-206ENST00000476464 MT1AP04731 61 aa4.92□□□□□ -1.62
PSMD6-206ENST00000476464 KRTAP5-5Q701N2 237 aaPredicted RBP4.9□□□□□ -1.62
PSMD6-206ENST00000476464 KRTAP2-2Q9BYT5 123 aa4.82□□□□□ -1.64
PSMD6-206ENST00000476464 KRTAP4-9Q9BYQ8 210 aa4.77□□□□□ -1.65
PSMD6-206ENST00000476464 SYNE1Q8NF91 8797 aaKnown RBP4.76□□□□□ -1.65
PSMD6-206ENST00000476464 KRTAP4-12Q9BQ66 201 aa4.76□□□□□ -1.65
PSMD6-206ENST00000476464 KRTAP12-4P60329 112 aa4.74□□□□□ -1.65
PSMD6-206ENST00000476464 KRTAP9-9Q9BYP9 154 aa4.72□□□□□ -1.65
PSMD6-206ENST00000476464 KRTAP9-4Q9BYQ2 154 aa4.72□□□□□ -1.65
PSMD6-206ENST00000476464 LCE3DQ9BYE3 92 aa4.58□□□□□ -1.68
PSMD6-206ENST00000476464 LCE1DQ5T752 114 aa4.55□□□□□ -1.68
PSMD6-206ENST00000476464 KRTAP6-2Q3LI66 62 aa4.5□□□□□ -1.69
PSMD6-206ENST00000476464 LCE3EQ5T5B0 92 aa4.49□□□□□ -1.69
PSMD6-206ENST00000476464 KRTAP5-4Q6L8H1 288 aa4.47□□□□□ -1.69
PSMD6-206ENST00000476464 MT3P25713 68 aa4.44□□□□□ -1.7
PSMD6-206ENST00000476464 LCE4AQ5TA78 99 aa4.4□□□□□ -1.71
PSMD6-206ENST00000476464 KRTAP4-2Q9BYR5 136 aa4.37□□□□□ -1.71
PSMD6-206ENST00000476464 MT4P47944 62 aa4.34□□□□□ -1.71
PSMD6-206ENST00000476464 OBSCNQ5VST9 7968 aa4.28□□□□□ -1.72
PSMD6-206ENST00000476464 KRTAP4-11Q9BYQ6 195 aa4.23□□□□□ -1.73
PSMD6-206ENST00000476464 KRTAP20-2Q3LI61 65 aa4.21□□□□□ -1.74
PSMD6-206ENST00000476464 HMCN1Q96RW7 5635 aa4.19□□□□□ -1.74
PSMD6-206ENST00000476464 PRM1P04553 51 aa4.15□□□□□ -1.74
PSMD6-206ENST00000476464 KRTAP5-2Q701N4 177 aa4.12□□□□□ -1.75
PSMD6-206ENST00000476464 KRTAP5-3Q6L8H2 238 aa4.1□□□□□ -1.75
PSMD6-206ENST00000476464 GPR98Q8WXG9 6306 aa4.05□□□□□ -1.76
PSMD6-206ENST00000476464 AHNAK2Q8IVF2 5795 aa3.95□□□□□ -1.78
PSMD6-206ENST00000476464 KRTAP5-10Q6L8G5 202 aa3.89□□□□□ -1.79
PSMD6-206ENST00000476464 KRTAP5-7Q6L8G8 165 aa3.75□□□□□ -1.81
PSMD6-206ENST00000476464 LCE1EQ5T753 118 aa3.71□□□□□ -1.82
PSMD6-206ENST00000476464 MUC5ACP98088 5654 aa3.7□□□□□ -1.82
PSMD6-206ENST00000476464 LCE1BQ5T7P3 118 aa3.64□□□□□ -1.83
PSMD6-206ENST00000476464 KRTAP5-1Q6L8H4 278 aa3.53□□□□□ -1.84
PSMD6-206ENST00000476464 KRTAP5-8O75690 187 aa3.5□□□□□ -1.85
PSMD6-206ENST00000476464 LCE1CQ5T751 118 aa3.49□□□□□ -1.85
PSMD6-206ENST00000476464 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
PSMD6-206ENST00000476464 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.26□□□□□ -1.89
PSMD6-206ENST00000476464 MUC5BQ9HC84 5762 aaPredicted RBP3.23□□□□□ -1.89
PSMD6-206ENST00000476464 AHNAKQ09666 5890 aaKnown RBP3.23□□□□□ -1.89
PSMD6-206ENST00000476464 KRTAP21-2Q3LI59 83 aa3.2□□□□□ -1.9
PSMD6-206ENST00000476464 KRTAP5-11Q6L8G4 156 aa3.03□□□□□ -1.92
PSMD6-206ENST00000476464 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
PSMD6-206ENST00000476464 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
PSMD6-206ENST00000476464 MUC19Q7Z5P9 8384 aa2.59□□□□□ -2
PSMD6-206ENST00000476464 KRTAP21-1Q3LI58 79 aa2.55□□□□□ -2
PSMD6-206ENST00000476464 MUC16Q8WXI7 14507 aa1.71□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 11.4 ms