RNA–Protein interactions for RNA: ENST00000476350.1

MACF1-216, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 5,304 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-216ENST00000476350 KRTAP2-3P0C7H8 128 aa3.04□□□□□ -1.92
MACF1-216ENST00000476350 KRTAP2-4Q9BYR9 128 aa3.04□□□□□ -1.92
MACF1-216ENST00000476350 LCE2AQ5TA79 106 aaPredicted RBP3.02□□□□□ -1.93
MACF1-216ENST00000476350 LCE3BQ5TA77 95 aa2.99□□□□□ -1.93
MACF1-216ENST00000476350 KRTAP4-8A0A0G2JLE6 195 aa2.96□□□□□ -1.94
MACF1-216ENST00000476350 KRTAP4-8Q9BYQ9 185 aa2.96□□□□□ -1.94
MACF1-216ENST00000476350 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.95□□□□□ -1.94
MACF1-216ENST00000476350 KRTAP9-6A8MVA2 160 aa2.94□□□□□ -1.94
MACF1-216ENST00000476350 KRTAP2-1Q9BYU5 128 aa2.91□□□□□ -1.94
MACF1-216ENST00000476350 KRTAP19-3Q7Z4W3 81 aa2.91□□□□□ -1.94
MACF1-216ENST00000476350 KRTAP4-7Q9BYR0 210 aa2.91□□□□□ -1.94
MACF1-216ENST00000476350 KRTAP2-2Q9BYT5 123 aa2.9□□□□□ -1.94
MACF1-216ENST00000476350 LCE1AQ5T7P2 110 aa2.9□□□□□ -1.94
MACF1-216ENST00000476350 KMT2DO14686 5537 aa2.88□□□□□ -1.95
MACF1-216ENST00000476350 KRTAP19-7Q3SYF9 63 aa2.87□□□□□ -1.95
MACF1-216ENST00000476350 MT1LQ93083 61 aa2.84□□□□□ -1.96
MACF1-216ENST00000476350 MT4P47944 62 aa2.82□□□□□ -1.96
MACF1-216ENST00000476350 MT1EP04732 61 aa2.82□□□□□ -1.96
MACF1-216ENST00000476350 LCE4AQ5TA78 99 aa2.8□□□□□ -1.96
MACF1-216ENST00000476350 USH2AO75445 5202 aa2.76□□□□□ -1.97
MACF1-216ENST00000476350 MT3P25713 68 aa2.75□□□□□ -1.97
MACF1-216ENST00000476350 LOC100996750A0A140TA64 210 aa2.73□□□□□ -1.97
MACF1-216ENST00000476350 SSPOA2VEC9 5147 aa2.69□□□□□ -1.98
MACF1-216ENST00000476350 KRTAP4-3Q9BYR4 195 aa2.69□□□□□ -1.98
MACF1-216ENST00000476350 SYNE2Q8WXH0 6885 aaKnown RBP2.68□□□□□ -1.98
MACF1-216ENST00000476350 MT1MQ8N339 61 aa2.66□□□□□ -1.98
MACF1-216ENST00000476350 SYNE1Q8NF91 8797 aaKnown RBP2.6□□□□□ -1.99
MACF1-216ENST00000476350 GPR98Q8WXG9 6306 aa2.59□□□□□ -1.99
MACF1-216ENST00000476350 LCE3DQ9BYE3 92 aa2.59□□□□□ -2
MACF1-216ENST00000476350 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
MACF1-216ENST00000476350 LCE1DQ5T752 114 aa2.53□□□□□ -2
MACF1-216ENST00000476350 MT1AP04731 61 aa2.52□□□□□ -2.01
MACF1-216ENST00000476350 LCE1BQ5T7P3 118 aa2.52□□□□□ -2.01
MACF1-216ENST00000476350 LCE5AQ5TCM9 118 aa2.5□□□□□ -2.01
MACF1-216ENST00000476350 NEBP20929 6669 aa2.5□□□□□ -2.01
MACF1-216ENST00000476350 KRTAP4-9Q9BYQ8 210 aa2.49□□□□□ -2.01
MACF1-216ENST00000476350 KRTAP9-9Q9BYP9 154 aa2.49□□□□□ -2.01
MACF1-216ENST00000476350 FSIP2Q5CZC0 6907 aa2.48□□□□□ -2.01
MACF1-216ENST00000476350 FCGBPQ9Y6R7 5405 aaPredicted RBP2.46□□□□□ -2.02
MACF1-216ENST00000476350 KRTAP6-1Q3LI64 71 aa2.42□□□□□ -2.02
MACF1-216ENST00000476350 KRTAP5-9P26371 169 aa2.42□□□□□ -2.02
MACF1-216ENST00000476350 MACF1Q9UPN3 7388 aaKnown RBP2.4□□□□□ -2.03
MACF1-216ENST00000476350 MUC12Q9UKN1 5478 aa2.38□□□□□ -2.03
MACF1-216ENST00000476350 PRM1P04553 51 aa2.37□□□□□ -2.03
MACF1-216ENST00000476350 KRTAP5-5Q701N2 237 aaPredicted RBP2.35□□□□□ -2.03
MACF1-216ENST00000476350 KRTAP9-4Q9BYQ2 154 aa2.3□□□□□ -2.04
MACF1-216ENST00000476350 LCE1CQ5T751 118 aa2.3□□□□□ -2.04
MACF1-216ENST00000476350 LCE1EQ5T753 118 aa2.3□□□□□ -2.04
MACF1-216ENST00000476350 LCE1FQ5T754 118 aa2.3□□□□□ -2.04
MACF1-216ENST00000476350 KRTAP6-2Q3LI66 62 aa2.26□□□□□ -2.05
MACF1-216ENST00000476350 OBSCNQ5VST9 7968 aa2.23□□□□□ -2.05
MACF1-216ENST00000476350 KRTAP4-6Q9BYQ5 205 aa2.23□□□□□ -2.05
MACF1-216ENST00000476350 DSTQ03001 7570 aaKnown RBP2.12□□□□□ -2.07
MACF1-216ENST00000476350 KRTAP5-4Q6L8H1 288 aa2.12□□□□□ -2.07
MACF1-216ENST00000476350 KRTAP20-2Q3LI61 65 aa2.12□□□□□ -2.07
MACF1-216ENST00000476350 MDN1Q9NU22 5596 aa2.1□□□□□ -2.07
MACF1-216ENST00000476350 AHNAK2Q8IVF2 5795 aa2.06□□□□□ -2.08
MACF1-216ENST00000476350 KRTAP4-11Q9BYQ6 195 aa2.02□□□□□ -2.09
MACF1-216ENST00000476350 HMCN1Q96RW7 5635 aa2□□□□□ -2.09
MACF1-216ENST00000476350 KRTAP5-3Q6L8H2 238 aa1.98□□□□□ -2.09
MACF1-216ENST00000476350 KRTAP4-12Q9BQ66 201 aa1.92□□□□□ -2.1
MACF1-216ENST00000476350 MUC19Q7Z5P9 8384 aa1.87□□□□□ -2.11
MACF1-216ENST00000476350 KRTAP5-2Q701N4 177 aa1.82□□□□□ -2.12
MACF1-216ENST00000476350 KRTAP4-2Q9BYR5 136 aa1.79□□□□□ -2.12
MACF1-216ENST00000476350 MUC5ACP98088 5654 aa1.77□□□□□ -2.13
MACF1-216ENST00000476350 AHNAKQ09666 5890 aaKnown RBP1.73□□□□□ -2.13
MACF1-216ENST00000476350 KRTAP5-10Q6L8G5 202 aa1.71□□□□□ -2.14
MACF1-216ENST00000476350 KRTAP5-8O75690 187 aa1.68□□□□□ -2.14
MACF1-216ENST00000476350 KRTAP5-7Q6L8G8 165 aa1.67□□□□□ -2.14
MACF1-216ENST00000476350 KRTAP5-1Q6L8H4 278 aa1.66□□□□□ -2.14
MACF1-216ENST00000476350 PHGR1C9JFL3 82 aa1.64□□□□□ -2.15
MACF1-216ENST00000476350 MUC5BQ9HC84 5762 aaPredicted RBP1.6□□□□□ -2.15
MACF1-216ENST00000476350 KRTAP21-2Q3LI59 83 aa1.53□□□□□ -2.16
MACF1-216ENST00000476350 KRTAP4-4Q9BYR3 166 aa1.52□□□□□ -2.17
MACF1-216ENST00000476350 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.49□□□□□ -2.17
MACF1-216ENST00000476350 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
MACF1-216ENST00000476350 KRTAP5-11Q6L8G4 156 aa1.42□□□□□ -2.18
MACF1-216ENST00000476350 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 10.3 ms