RNA–Protein interactions for RNA: ENST00000476289.5

CHKB-207, Transcript of choline kinase beta, humanhuman

TSL 5

Gene CHKB, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-207ENST00000476289 GPR98Q8WXG9 6306 aa11.21□□□□□ -0.61
CHKB-207ENST00000476289 LCE1DQ5T752 114 aa11.18□□□□□ -0.62
CHKB-207ENST00000476289 UQCR11O14957 56 aa11.14□□□□□ -0.63
CHKB-207ENST00000476289 LCE4AQ5TA78 99 aa11.11□□□□□ -0.63
CHKB-207ENST00000476289 MT4P47944 62 aa11.04□□□□□ -0.64
CHKB-207ENST00000476289 KRTAP12-3P60328 96 aa11.03□□□□□ -0.64
CHKB-207ENST00000476289 HMCN1Q96RW7 5635 aa11□□□□□ -0.65
CHKB-207ENST00000476289 KRTAP4-7Q9BYR0 210 aa10.95□□□□□ -0.66
CHKB-207ENST00000476289 KRTAP5-4Q6L8H1 288 aa10.94□□□□□ -0.66
CHKB-207ENST00000476289 MIR22HGQ0VDD5 57 aa10.9□□□□□ -0.66
CHKB-207ENST00000476289 KRTAP25-1Q3LHN0 102 aa10.79□□□□□ -0.68
CHKB-207ENST00000476289 KRTAP4-6Q9BYQ5 205 aa10.74□□□□□ -0.69
CHKB-207ENST00000476289 PSPHP1O15172 72 aa10.68□□□□□ -0.7
CHKB-207ENST00000476289 K7ERS5 55 aa10.65□□□□□ -0.7
CHKB-207ENST00000476289 AHNAK2Q8IVF2 5795 aa10.62□□□□□ -0.71
CHKB-207ENST00000476289 V9GYY9 64 aa10.61□□□□□ -0.71
CHKB-207ENST00000476289 Q1T7F1 81 aa10.59□□□□□ -0.71
CHKB-207ENST00000476289 KRTAP5-5Q701N2 237 aaPredicted RBP10.51□□□□□ -0.73
CHKB-207ENST00000476289 KRTAP5-10Q6L8G5 202 aa10.41□□□□□ -0.74
CHKB-207ENST00000476289 LOC100996750A0A140TA64 210 aa10.37□□□□□ -0.75
CHKB-207ENST00000476289 KRTAP23-1A1A580 65 aa10.35□□□□□ -0.75
CHKB-207ENST00000476289 KRTAP20-2Q3LI61 65 aa10.33□□□□□ -0.76
CHKB-207ENST00000476289 KRTAP19-4Q3LI73 84 aa10.3□□□□□ -0.76
CHKB-207ENST00000476289 A6NED7 52 aa10.28□□□□□ -0.76
CHKB-207ENST00000476289 KRTAP15-1Q3LI76 137 aa10.28□□□□□ -0.76
CHKB-207ENST00000476289 PCP4P48539 62 aa10.24□□□□□ -0.77
CHKB-207ENST00000476289 SPRR5A0A1B0GTR4 108 aa10.23□□□□□ -0.77
CHKB-207ENST00000476289 KRTAP12-4P60329 112 aa10.18□□□□□ -0.78
CHKB-207ENST00000476289 KRTAP5-3Q6L8H2 238 aa10.16□□□□□ -0.78
CHKB-207ENST00000476289 LCE3CQ5T5A8 94 aa10.15□□□□□ -0.78
CHKB-207ENST00000476289 CDC42SE1Q9NRR8 79 aa10.12□□□□□ -0.79
CHKB-207ENST00000476289 SYNE1Q8NF91 8797 aaKnown RBP10.11□□□□□ -0.79
CHKB-207ENST00000476289 RPS28P62857 69 aaKnown RBP10.05□□□□□ -0.8
CHKB-207ENST00000476289 KRTAP5-7Q6L8G8 165 aa9.99□□□□□ -0.81
CHKB-207ENST00000476289 ROMO1P60602 79 aa9.97□□□□□ -0.81
CHKB-207ENST00000476289 MT1AP04731 61 aa9.75□□□□□ -0.85
CHKB-207ENST00000476289 KRTAP6-1Q3LI64 71 aa9.72□□□□□ -0.85
CHKB-207ENST00000476289 KRTAP9-6A8MVA2 160 aa9.65□□□□□ -0.86
CHKB-207ENST00000476289 KRTAP5-2Q701N4 177 aa9.58□□□□□ -0.88
CHKB-207ENST00000476289 KRTAP4-11Q9BYQ6 195 aa9.43□□□□□ -0.9
CHKB-207ENST00000476289 KRTAP9-4Q9BYQ2 154 aa9.41□□□□□ -0.9
CHKB-207ENST00000476289 KRTAP6-2Q3LI66 62 aa9.29□□□□□ -0.92
CHKB-207ENST00000476289 KRTAP5-8O75690 187 aa9.14□□□□□ -0.95
CHKB-207ENST00000476289 OBSCNQ5VST9 7968 aa9.01□□□□□ -0.97
CHKB-207ENST00000476289 MT3P25713 68 aa8.88□□□□□ -0.99
CHKB-207ENST00000476289 BRK1Q8WUW1 75 aa8.79□□□□□ -1
CHKB-207ENST00000476289 MUC5ACP98088 5654 aa8.73□□□□□ -1.01
CHKB-207ENST00000476289 MUC5BQ9HC84 5762 aaPredicted RBP8.71□□□□□ -1.01
CHKB-207ENST00000476289 AHNAKQ09666 5890 aaKnown RBP8.71□□□□□ -1.02
CHKB-207ENST00000476289 KRTAP9-9Q9BYP9 154 aa8.62□□□□□ -1.03
CHKB-207ENST00000476289 KRTAP5-1Q6L8H4 278 aa8.61□□□□□ -1.03
CHKB-207ENST00000476289 PMAIP1Q13794 54 aa8.3□□□□□ -1.08
CHKB-207ENST00000476289 LCE1EQ5T753 118 aa8.17□□□□□ -1.1
CHKB-207ENST00000476289 PRO0628Q9UI54 55 aa8.01□□□□□ -1.13
CHKB-207ENST00000476289 PRAC1Q96KF2 57 aa7.97□□□□□ -1.13
CHKB-207ENST00000476289 KRTAP4-2Q9BYR5 136 aa7.79□□□□□ -1.16
CHKB-207ENST00000476289 LCE1BQ5T7P3 118 aa7.73□□□□□ -1.17
CHKB-207ENST00000476289 LCE1CQ5T751 118 aa7.59□□□□□ -1.19
CHKB-207ENST00000476289 KTN1-AS1Q86SY8 53 aa7.58□□□□□ -1.2
CHKB-207ENST00000476289 LCE3DQ9BYE3 92 aa7.29□□□□□ -1.24
CHKB-207ENST00000476289 SVIPQ8NHG7 77 aa7.14□□□□□ -1.27
CHKB-207ENST00000476289 KRTAP4-12Q9BQ66 201 aa7.08□□□□□ -1.28
CHKB-207ENST00000476289 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.91□□□□□ -1.3
CHKB-207ENST00000476289 KRTAP5-11Q6L8G4 156 aa6.9□□□□□ -1.3
CHKB-207ENST00000476289 LCE3EQ5T5B0 92 aa6.84□□□□□ -1.31
CHKB-207ENST00000476289 LCE1FQ5T754 118 aa6.68□□□□□ -1.34
CHKB-207ENST00000476289 LUZP6Q538Z0 58 aa6.64□□□□□ -1.35
CHKB-207ENST00000476289 KRTAP21-2Q3LI59 83 aa6.4□□□□□ -1.38
CHKB-207ENST00000476289 PHGR1C9JFL3 82 aa6.05□□□□□ -1.44
CHKB-207ENST00000476289 KRTAP4-4Q9BYR3 166 aa5.89□□□□□ -1.47
CHKB-207ENST00000476289 NDUFAF8A1L188 74 aa5.63□□□□□ -1.51
CHKB-207ENST00000476289 MUC19Q7Z5P9 8384 aa5.56□□□□□ -1.52
CHKB-207ENST00000476289 PRM1P04553 51 aa5.12□□□□□ -1.59
CHKB-207ENST00000476289 INE1O15225 51 aa4.62□□□□□ -1.67
CHKB-207ENST00000476289 A0A0A0MQY5 61 aa4.6□□□□□ -1.67
CHKB-207ENST00000476289 KRTAP21-1Q3LI58 79 aa4.57□□□□□ -1.68
CHKB-207ENST00000476289 MUC16Q8WXI7 14507 aa3.92□□□□□ -1.78
CHKB-207ENST00000476289 H3BS24 57 aa3.78□□□□□ -1.8
Retrieved 78 of 20,778 RNA–protein pairs in 26.2 ms