RNA–Protein interactions for RNA: ENST00000476217.5

SSR3-206, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3 BASIC

Gene SSR3, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-206ENST00000476217 R4GN34 69 aa2.33□□□□□ -2.04
SSR3-206ENST00000476217 M0QZ58 72 aa2.32□□□□□ -2.04
SSR3-206ENST00000476217 MT2AP02795 61 aa2.32□□□□□ -2.04
SSR3-206ENST00000476217 CRIPTQ9P021 101 aa2.31□□□□□ -2.04
SSR3-206ENST00000476217 MT1FP04733 61 aa2.3□□□□□ -2.04
SSR3-206ENST00000476217 LINC01554Q52M75 96 aa2.3□□□□□ -2.04
SSR3-206ENST00000476217 A0A0D9SG42 100 aa2.29□□□□□ -2.04
SSR3-206ENST00000476217 KRTAP13-4Q3LI77 160 aa2.29□□□□□ -2.04
SSR3-206ENST00000476217 SPINT4Q6UDR6 99 aa2.28□□□□□ -2.04
SSR3-206ENST00000476217 KRTAP5-7Q6L8G8 165 aa2.25□□□□□ -2.05
SSR3-206ENST00000476217 K7ERS5 55 aa2.24□□□□□ -2.05
SSR3-206ENST00000476217 SPRR2GQ9BYE4 73 aa2.24□□□□□ -2.05
SSR3-206ENST00000476217 KRTAP12-1P59990 96 aa2.21□□□□□ -2.06
SSR3-206ENST00000476217 PLAC4Q8WY50 150 aa2.21□□□□□ -2.06
SSR3-206ENST00000476217 KRTAP25-1Q3LHN0 102 aa2.19□□□□□ -2.06
SSR3-206ENST00000476217 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
SSR3-206ENST00000476217 KRTAP19-8Q3LI54 63 aa2.18□□□□□ -2.06
SSR3-206ENST00000476217 MT1BP07438 61 aa2.16□□□□□ -2.06
SSR3-206ENST00000476217 ROMO1P60602 79 aa2.16□□□□□ -2.06
SSR3-206ENST00000476217 KRTAP5-8O75690 187 aa2.12□□□□□ -2.07
SSR3-206ENST00000476217 KRTAP12-4P60329 112 aa2.12□□□□□ -2.07
SSR3-206ENST00000476217 PRO2289Q9P1D8 64 aa2.12□□□□□ -2.07
SSR3-206ENST00000476217 USH2AO75445 5202 aa2.12□□□□□ -2.07
SSR3-206ENST00000476217 KRTAP12-3P60328 96 aa2.09□□□□□ -2.07
SSR3-206ENST00000476217 FSIP2Q5CZC0 6907 aa2.09□□□□□ -2.07
SSR3-206ENST00000476217 MT1XP80297 61 aa2.08□□□□□ -2.08
SSR3-206ENST00000476217 C10orf95Q9H7T3 257 aa2.08□□□□□ -2.08
SSR3-206ENST00000476217 SSPOA2VEC9 5147 aa2.06□□□□□ -2.08
SSR3-206ENST00000476217 TNP1P09430 55 aa2.06□□□□□ -2.08
SSR3-206ENST00000476217 KRTAP19-6Q3LI70 58 aa2.05□□□□□ -2.08
SSR3-206ENST00000476217 LUZP6Q538Z0 58 aa2.02□□□□□ -2.09
SSR3-206ENST00000476217 KRTAP6-3Q3LI67 103 aa2.01□□□□□ -2.09
SSR3-206ENST00000476217 CRCT1Q9UGL9 99 aa2.01□□□□□ -2.09
SSR3-206ENST00000476217 FCGBPQ9Y6R7 5405 aaPredicted RBP1.99□□□□□ -2.09
SSR3-206ENST00000476217 MACF1Q9UPN3 7388 aaKnown RBP1.96□□□□□ -2.1
SSR3-206ENST00000476217 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
SSR3-206ENST00000476217 KRTAP8-1Q8IUC2 63 aa1.91□□□□□ -2.1
SSR3-206ENST00000476217 KMT2DO14686 5537 aa1.9□□□□□ -2.11
SSR3-206ENST00000476217 SYNE2Q8WXH0 6885 aaKnown RBP1.89□□□□□ -2.11
SSR3-206ENST00000476217 KRTAP19-5Q3LI72 72 aa1.89□□□□□ -2.11
SSR3-206ENST00000476217 KRTAP19-7Q3SYF9 63 aa1.85□□□□□ -2.11
SSR3-206ENST00000476217 SPRR2FQ96RM1 72 aa1.84□□□□□ -2.11
SSR3-206ENST00000476217 MT1EP04732 61 aa1.83□□□□□ -2.12
SSR3-206ENST00000476217 MT1LQ93083 61 aa1.79□□□□□ -2.12
SSR3-206ENST00000476217 MUC12Q9UKN1 5478 aa1.78□□□□□ -2.12
SSR3-206ENST00000476217 SPRR2EP22531 72 aa1.77□□□□□ -2.13
SSR3-206ENST00000476217 SPRR2BP35325 72 aa1.77□□□□□ -2.13
SSR3-206ENST00000476217 SPRR2AP35326 72 aa1.77□□□□□ -2.13
SSR3-206ENST00000476217 KRTAP19-3Q7Z4W3 81 aa1.77□□□□□ -2.13
SSR3-206ENST00000476217 NEBP20929 6669 aa1.75□□□□□ -2.13
SSR3-206ENST00000476217 MT1GP13640 62 aa1.75□□□□□ -2.13
SSR3-206ENST00000476217 MDN1Q9NU22 5596 aa1.75□□□□□ -2.13
SSR3-206ENST00000476217 MT1MQ8N339 61 aa1.73□□□□□ -2.13
SSR3-206ENST00000476217 SPRR2DP22532 72 aa1.71□□□□□ -2.14
SSR3-206ENST00000476217 INE1O15225 51 aa1.68□□□□□ -2.14
SSR3-206ENST00000476217 DSTQ03001 7570 aaKnown RBP1.66□□□□□ -2.14
SSR3-206ENST00000476217 KRTAP2-3P0C7H8 128 aa1.59□□□□□ -2.15
SSR3-206ENST00000476217 KRTAP20-1Q3LI63 56 aa1.59□□□□□ -2.15
SSR3-206ENST00000476217 KRTAP2-4Q9BYR9 128 aa1.59□□□□□ -2.15
SSR3-206ENST00000476217 KRTAP2-1Q9BYU5 128 aa1.55□□□□□ -2.16
SSR3-206ENST00000476217 MT1AP04731 61 aa1.53□□□□□ -2.16
SSR3-206ENST00000476217 KRTAP6-1Q3LI64 71 aa1.5□□□□□ -2.17
SSR3-206ENST00000476217 MT4P47944 62 aa1.48□□□□□ -2.17
SSR3-206ENST00000476217 SYNE1Q8NF91 8797 aaKnown RBP1.47□□□□□ -2.17
SSR3-206ENST00000476217 HMCN1Q96RW7 5635 aa1.43□□□□□ -2.18
SSR3-206ENST00000476217 KRTAP20-2Q3LI61 65 aa1.41□□□□□ -2.18
SSR3-206ENST00000476217 KRTAP6-2Q3LI66 62 aa1.4□□□□□ -2.19
SSR3-206ENST00000476217 AHNAK2Q8IVF2 5795 aa1.34□□□□□ -2.2
SSR3-206ENST00000476217 GPR98Q8WXG9 6306 aa1.25□□□□□ -2.21
SSR3-206ENST00000476217 KRTAP5-10Q6L8G5 202 aa1.2□□□□□ -2.22
SSR3-206ENST00000476217 MUC5ACP98088 5654 aa1.13□□□□□ -2.23
SSR3-206ENST00000476217 PRM1P04553 51 aa1.1□□□□□ -2.23
SSR3-206ENST00000476217 MUC5BQ9HC84 5762 aaPredicted RBP1.08□□□□□ -2.24
SSR3-206ENST00000476217 AHNAKQ09666 5890 aaKnown RBP1.06□□□□□ -2.24
SSR3-206ENST00000476217 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
SSR3-206ENST00000476217 PHGR1C9JFL3 82 aa0.86□□□□□ -2.27
SSR3-206ENST00000476217 KRTAP21-1Q3LI58 79 aa0.77□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 8.8 ms