RNA–Protein interactions for RNA: ENST00000475729.5

PHC3-206, Transcript of polyhomeotic homolog 3, humanhuman

TSL 5

Gene PHC3, Length 772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-206ENST00000475729 RPL37P61927 97 aaKnown RBP1.42□□□□□ -2.18
PHC3-206ENST00000475729 KRTAP21-2Q3LI59 83 aa1.42□□□□□ -2.18
PHC3-206ENST00000475729 SSPOA2VEC9 5147 aa1.42□□□□□ -2.18
PHC3-206ENST00000475729 UNQ6190/PRO20217Q6UXQ8 127 aa1.41□□□□□ -2.18
PHC3-206ENST00000475729 A0A096LNI7 61 aa1.4□□□□□ -2.19
PHC3-206ENST00000475729 MMP24-AS1A0A0U1RRL7 71 aa1.4□□□□□ -2.19
PHC3-206ENST00000475729 CLPSL2Q6UWE3 100 aa1.4□□□□□ -2.19
PHC3-206ENST00000475729 H0YAA0 97 aa1.39□□□□□ -2.19
PHC3-206ENST00000475729 H1FX-AS1Q4G0G2 97 aa1.39□□□□□ -2.19
PHC3-206ENST00000475729 FLGP20930 4061 aaPredicted RBP1.38□□□□□ -2.19
PHC3-206ENST00000475729 SYNE2Q8WXH0 6885 aaKnown RBP1.37□□□□□ -2.19
PHC3-206ENST00000475729 GPR98Q8WXG9 6306 aa1.36□□□□□ -2.19
PHC3-206ENST00000475729 MACF1Q9UPN3 7388 aaKnown RBP1.36□□□□□ -2.19
PHC3-206ENST00000475729 NEBP20929 6669 aa1.36□□□□□ -2.19
PHC3-206ENST00000475729 DEFB105AQ8NG35 78 aa1.35□□□□□ -2.19
PHC3-206ENST00000475729 USH2AO75445 5202 aa1.35□□□□□ -2.19
PHC3-206ENST00000475729 SPRR1AP35321 89 aa1.34□□□□□ -2.19
PHC3-206ENST00000475729 KRTAP20-1Q3LI63 56 aa1.34□□□□□ -2.19
PHC3-206ENST00000475729 SPRR1BP22528 89 aa1.33□□□□□ -2.2
PHC3-206ENST00000475729 FCGBPQ9Y6R7 5405 aaPredicted RBP1.33□□□□□ -2.2
PHC3-206ENST00000475729 RPS29P62273 56 aaKnown RBP1.31□□□□□ -2.2
PHC3-206ENST00000475729 PRLHP81277 87 aa1.31□□□□□ -2.2
PHC3-206ENST00000475729 KRTAP4-1Q9BYQ7 146 aa1.3□□□□□ -2.2
PHC3-206ENST00000475729 SPINK1P00995 79 aa1.29□□□□□ -2.2
PHC3-206ENST00000475729 MT1HP80294 61 aa1.29□□□□□ -2.2
PHC3-206ENST00000475729 KRTAP19-2Q3LHN2 52 aa1.29□□□□□ -2.2
PHC3-206ENST00000475729 KRTAP12-1P59990 96 aa1.26□□□□□ -2.21
PHC3-206ENST00000475729 C10orf95Q9H7T3 257 aa1.26□□□□□ -2.21
PHC3-206ENST00000475729 S4R3F8 94 aa1.26□□□□□ -2.21
PHC3-206ENST00000475729 MUC12Q9UKN1 5478 aa1.26□□□□□ -2.21
PHC3-206ENST00000475729 M0QZ58 72 aa1.24□□□□□ -2.21
PHC3-206ENST00000475729 M0R2T5 61 aa1.24□□□□□ -2.21
PHC3-206ENST00000475729 KRTAP13-4Q3LI77 160 aa1.23□□□□□ -2.21
PHC3-206ENST00000475729 MDN1Q9NU22 5596 aa1.21□□□□□ -2.22
PHC3-206ENST00000475729 C9orf92A6NGG3 77 aa1.2□□□□□ -2.22
PHC3-206ENST00000475729 KRTAP2-3P0C7H8 128 aa1.19□□□□□ -2.22
PHC3-206ENST00000475729 KRTAP2-4Q9BYR9 128 aa1.19□□□□□ -2.22
PHC3-206ENST00000475729 KMT2DO14686 5537 aa1.19□□□□□ -2.22
PHC3-206ENST00000475729 KRTAP19-6Q3LI70 58 aa1.18□□□□□ -2.22
PHC3-206ENST00000475729 AHNAK2Q8IVF2 5795 aa1.18□□□□□ -2.22
PHC3-206ENST00000475729 A0A0D9SG42 100 aa1.17□□□□□ -2.22
PHC3-206ENST00000475729 MT2AP02795 61 aa1.17□□□□□ -2.22
PHC3-206ENST00000475729 MT1FP04733 61 aa1.16□□□□□ -2.22
PHC3-206ENST00000475729 KRTAP2-1Q9BYU5 128 aa1.13□□□□□ -2.23
PHC3-206ENST00000475729 TNP1P09430 55 aa1.11□□□□□ -2.23
PHC3-206ENST00000475729 HMCN1Q96RW7 5635 aa1.09□□□□□ -2.23
PHC3-206ENST00000475729 AHNAKQ09666 5890 aaKnown RBP1.09□□□□□ -2.24
PHC3-206ENST00000475729 DSTQ03001 7570 aaKnown RBP1.07□□□□□ -2.24
PHC3-206ENST00000475729 KRTAP19-8Q3LI54 63 aa1.06□□□□□ -2.24
PHC3-206ENST00000475729 MT1BP07438 61 aa1.05□□□□□ -2.24
PHC3-206ENST00000475729 KRTAP5-10Q6L8G5 202 aa1.04□□□□□ -2.24
PHC3-206ENST00000475729 SPRR2GQ9BYE4 73 aa1.04□□□□□ -2.24
PHC3-206ENST00000475729 MUC5BQ9HC84 5762 aaPredicted RBP1.04□□□□□ -2.24
PHC3-206ENST00000475729 SPRR2EP22531 72 aa1.02□□□□□ -2.25
PHC3-206ENST00000475729 SPRR2BP35325 72 aa1.02□□□□□ -2.25
PHC3-206ENST00000475729 SPRR2AP35326 72 aa1.02□□□□□ -2.25
PHC3-206ENST00000475729 SPRR2FQ96RM1 72 aa1□□□□□ -2.25
PHC3-206ENST00000475729 SPRR2DP22532 72 aa0.99□□□□□ -2.25
PHC3-206ENST00000475729 KRTAP8-1Q8IUC2 63 aa0.98□□□□□ -2.25
PHC3-206ENST00000475729 MUC5ACP98088 5654 aa0.98□□□□□ -2.25
PHC3-206ENST00000475729 MT1XP80297 61 aa0.96□□□□□ -2.26
PHC3-206ENST00000475729 MT4P47944 62 aa0.88□□□□□ -2.27
PHC3-206ENST00000475729 KRTAP19-3Q7Z4W3 81 aa0.88□□□□□ -2.27
PHC3-206ENST00000475729 MT1EP04732 61 aa0.86□□□□□ -2.27
PHC3-206ENST00000475729 MT1GP13640 62 aa0.86□□□□□ -2.27
PHC3-206ENST00000475729 KRTAP19-7Q3SYF9 63 aa0.86□□□□□ -2.27
PHC3-206ENST00000475729 SYNE1Q8NF91 8797 aaKnown RBP0.84□□□□□ -2.27
PHC3-206ENST00000475729 MT1MQ8N339 61 aa0.82□□□□□ -2.28
PHC3-206ENST00000475729 KRTAP20-2Q3LI61 65 aa0.8□□□□□ -2.28
PHC3-206ENST00000475729 KRTAP19-5Q3LI72 72 aa0.8□□□□□ -2.28
PHC3-206ENST00000475729 MT1LQ93083 61 aa0.8□□□□□ -2.28
PHC3-206ENST00000475729 PRM1P04553 51 aa0.76□□□□□ -2.29
PHC3-206ENST00000475729 MT1AP04731 61 aa0.76□□□□□ -2.29
PHC3-206ENST00000475729 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
PHC3-206ENST00000475729 KRTAP6-1Q3LI64 71 aa0.68□□□□□ -2.3
PHC3-206ENST00000475729 KRTAP6-2Q3LI66 62 aa0.66□□□□□ -2.3
PHC3-206ENST00000475729 PHGR1C9JFL3 82 aa0.65□□□□□ -2.31
PHC3-206ENST00000475729 KRTAP21-1Q3LI58 79 aa0.57□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 11.5 ms