RNA–Protein interactions for RNA: ENST00000475422.5

ITSN1-227, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 798 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-227ENST00000475422 AHNAK2Q8IVF2 5795 aa5.43□□□□□ -1.54
ITSN1-227ENST00000475422 H7BZZ5 65 aa5.41□□□□□ -1.54
ITSN1-227ENST00000475422 KRTAP5-10Q6L8G5 202 aa5.4□□□□□ -1.54
ITSN1-227ENST00000475422 KRTAP4-7Q9BYR0 210 aa5.31□□□□□ -1.56
ITSN1-227ENST00000475422 KRTAP12-3P60328 96 aa5.28□□□□□ -1.56
ITSN1-227ENST00000475422 LOC100996750A0A140TA64 210 aa5.26□□□□□ -1.57
ITSN1-227ENST00000475422 KRTAP5-3Q6L8H2 238 aa5.24□□□□□ -1.57
ITSN1-227ENST00000475422 PRR15LQ9BU68 103 aa5.24□□□□□ -1.57
ITSN1-227ENST00000475422 KRTAP5-7Q6L8G8 165 aa5.23□□□□□ -1.57
ITSN1-227ENST00000475422 KRTAP20-2Q3LI61 65 aa5.2□□□□□ -1.58
ITSN1-227ENST00000475422 KRTAP5-5Q701N2 237 aaPredicted RBP5.15□□□□□ -1.59
ITSN1-227ENST00000475422 SPRR5A0A1B0GTR4 108 aa5.14□□□□□ -1.59
ITSN1-227ENST00000475422 KRTAP12-4P60329 112 aa5.14□□□□□ -1.59
ITSN1-227ENST00000475422 SVIPQ8NHG7 77 aa5.14□□□□□ -1.59
ITSN1-227ENST00000475422 ANAPC13Q9BS18 74 aa5.13□□□□□ -1.59
ITSN1-227ENST00000475422 PCP4P48539 62 aa5.12□□□□□ -1.59
ITSN1-227ENST00000475422 LINC01558Q9Y6Z2 57 aa5.07□□□□□ -1.6
ITSN1-227ENST00000475422 ATP5EP56381 51 aaPredicted RBP5.05□□□□□ -1.6
ITSN1-227ENST00000475422 UQCR11O14957 56 aa5.04□□□□□ -1.6
ITSN1-227ENST00000475422 KRTAP25-1Q3LHN0 102 aa5.03□□□□□ -1.6
ITSN1-227ENST00000475422 CCDC179H3BU77 68 aa5.01□□□□□ -1.61
ITSN1-227ENST00000475422 KRTAP19-4Q3LI73 84 aa4.95□□□□□ -1.62
ITSN1-227ENST00000475422 SYNE1Q8NF91 8797 aaKnown RBP4.93□□□□□ -1.62
ITSN1-227ENST00000475422 K7ERS5 55 aa4.9□□□□□ -1.63
ITSN1-227ENST00000475422 MIR22HGQ0VDD5 57 aa4.9□□□□□ -1.63
ITSN1-227ENST00000475422 KRTAP15-1Q3LI76 137 aa4.86□□□□□ -1.63
ITSN1-227ENST00000475422 LCE3CQ5T5A8 94 aa4.83□□□□□ -1.64
ITSN1-227ENST00000475422 TMEM258P61165 79 aa4.82□□□□□ -1.64
ITSN1-227ENST00000475422 KRTAP4-11Q9BYQ6 195 aa4.81□□□□□ -1.64
ITSN1-227ENST00000475422 KRTAP23-1A1A580 65 aa4.79□□□□□ -1.64
ITSN1-227ENST00000475422 MT1AP04731 61 aa4.75□□□□□ -1.65
ITSN1-227ENST00000475422 KRTAP6-1Q3LI64 71 aa4.74□□□□□ -1.65
ITSN1-227ENST00000475422 KRTAP5-2Q701N4 177 aa4.74□□□□□ -1.65
ITSN1-227ENST00000475422 PSPHP1O15172 72 aa4.68□□□□□ -1.66
ITSN1-227ENST00000475422 KRTAP5-8O75690 187 aa4.64□□□□□ -1.67
ITSN1-227ENST00000475422 V9GYY9 64 aa4.64□□□□□ -1.67
ITSN1-227ENST00000475422 KRTAP9-4Q9BYQ2 154 aa4.62□□□□□ -1.67
ITSN1-227ENST00000475422 KRTAP6-2Q3LI66 62 aa4.58□□□□□ -1.68
ITSN1-227ENST00000475422 CDC42SE1Q9NRR8 79 aa4.58□□□□□ -1.68
ITSN1-227ENST00000475422 RPS28P62857 69 aaKnown RBP4.56□□□□□ -1.68
ITSN1-227ENST00000475422 Q1T7F1 81 aa4.56□□□□□ -1.68
ITSN1-227ENST00000475422 MUC5ACP98088 5654 aa4.53□□□□□ -1.68
ITSN1-227ENST00000475422 KRTAP9-6A8MVA2 160 aa4.53□□□□□ -1.68
ITSN1-227ENST00000475422 A6NED7 52 aa4.52□□□□□ -1.69
ITSN1-227ENST00000475422 MUC5BQ9HC84 5762 aaPredicted RBP4.52□□□□□ -1.69
ITSN1-227ENST00000475422 AHNAKQ09666 5890 aaKnown RBP4.52□□□□□ -1.69
ITSN1-227ENST00000475422 OBSCNQ5VST9 7968 aa4.51□□□□□ -1.69
ITSN1-227ENST00000475422 ROMO1P60602 79 aa4.48□□□□□ -1.69
ITSN1-227ENST00000475422 KRTAP4-12Q9BQ66 201 aa4.48□□□□□ -1.69
ITSN1-227ENST00000475422 KRTAP9-9Q9BYP9 154 aa4.48□□□□□ -1.69
ITSN1-227ENST00000475422 MT3P25713 68 aa4.38□□□□□ -1.71
ITSN1-227ENST00000475422 KRTAP5-1Q6L8H4 278 aa4.3□□□□□ -1.72
ITSN1-227ENST00000475422 PRO0628Q9UI54 55 aa4.22□□□□□ -1.73
ITSN1-227ENST00000475422 H3BS24 57 aa4.06□□□□□ -1.76
ITSN1-227ENST00000475422 KRTAP4-2Q9BYR5 136 aa4.06□□□□□ -1.76
ITSN1-227ENST00000475422 LCE1EQ5T753 118 aa4.04□□□□□ -1.76
ITSN1-227ENST00000475422 BRK1Q8WUW1 75 aa4□□□□□ -1.77
ITSN1-227ENST00000475422 PMAIP1Q13794 54 aa3.99□□□□□ -1.77
ITSN1-227ENST00000475422 LCE1BQ5T7P3 118 aa3.88□□□□□ -1.79
ITSN1-227ENST00000475422 KTN1-AS1Q86SY8 53 aa3.84□□□□□ -1.79
ITSN1-227ENST00000475422 LCE1CQ5T751 118 aa3.75□□□□□ -1.81
ITSN1-227ENST00000475422 LCE3DQ9BYE3 92 aa3.45□□□□□ -1.86
ITSN1-227ENST00000475422 PRAC1Q96KF2 57 aa3.43□□□□□ -1.86
ITSN1-227ENST00000475422 KRTAP5-11Q6L8G4 156 aa3.42□□□□□ -1.86
ITSN1-227ENST00000475422 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
ITSN1-227ENST00000475422 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.36□□□□□ -1.87
ITSN1-227ENST00000475422 LCE3EQ5T5B0 92 aa3.21□□□□□ -1.9
ITSN1-227ENST00000475422 PHGR1C9JFL3 82 aa3.2□□□□□ -1.9
ITSN1-227ENST00000475422 A0A0A0MQY5 61 aa3.17□□□□□ -1.9
ITSN1-227ENST00000475422 KRTAP21-2Q3LI59 83 aa3.11□□□□□ -1.91
ITSN1-227ENST00000475422 NDUFAF8A1L188 74 aa3.05□□□□□ -1.92
ITSN1-227ENST00000475422 LUZP6Q538Z0 58 aa3.01□□□□□ -1.93
ITSN1-227ENST00000475422 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
ITSN1-227ENST00000475422 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
ITSN1-227ENST00000475422 INE1O15225 51 aa2.64□□□□□ -1.99
ITSN1-227ENST00000475422 KRTAP21-1Q3LI58 79 aa2.42□□□□□ -2.02
ITSN1-227ENST00000475422 PRM1P04553 51 aa2.27□□□□□ -2.05
ITSN1-227ENST00000475422 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 46.4 ms