RNA–Protein interactions for RNA: ENST00000474880.5

ARPC1B-216, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 5

Gene ARPC1B, Length 709 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-216ENST00000474880 PCP4P48539 62 aa4□□□□□ -1.77
ARPC1B-216ENST00000474880 MT1GP13640 62 aa3.99□□□□□ -1.77
ARPC1B-216ENST00000474880 PP632Q6XCG6 107 aa3.99□□□□□ -1.77
ARPC1B-216ENST00000474880 A6NED7 52 aa3.98□□□□□ -1.77
ARPC1B-216ENST00000474880 DSTQ03001 7570 aaKnown RBP3.97□□□□□ -1.77
ARPC1B-216ENST00000474880 KRTAP25-1Q3LHN0 102 aa3.96□□□□□ -1.78
ARPC1B-216ENST00000474880 RPS28P62857 69 aaKnown RBP3.95□□□□□ -1.78
ARPC1B-216ENST00000474880 MT1LQ93083 61 aa3.95□□□□□ -1.78
ARPC1B-216ENST00000474880 KRTAP4-9Q9BYQ8 210 aa3.93□□□□□ -1.78
ARPC1B-216ENST00000474880 MT1MQ8N339 61 aa3.91□□□□□ -1.78
ARPC1B-216ENST00000474880 KRTAP12-3P60328 96 aa3.9□□□□□ -1.79
ARPC1B-216ENST00000474880 CDC42SE1Q9NRR8 79 aa3.84□□□□□ -1.79
ARPC1B-216ENST00000474880 LCE1DQ5T752 114 aa3.83□□□□□ -1.8
ARPC1B-216ENST00000474880 KRTAP4-3Q9BYR4 195 aa3.83□□□□□ -1.8
ARPC1B-216ENST00000474880 KRTAP23-1A1A580 65 aa3.8□□□□□ -1.8
ARPC1B-216ENST00000474880 LCE4AQ5TA78 99 aa3.8□□□□□ -1.8
ARPC1B-216ENST00000474880 MT4P47944 62 aa3.78□□□□□ -1.8
ARPC1B-216ENST00000474880 ROMO1P60602 79 aa3.77□□□□□ -1.81
ARPC1B-216ENST00000474880 KRTAP5-4Q6L8H1 288 aa3.74□□□□□ -1.81
ARPC1B-216ENST00000474880 KRTAP4-7Q9BYR0 210 aa3.73□□□□□ -1.81
ARPC1B-216ENST00000474880 KRTAP19-4Q3LI73 84 aa3.72□□□□□ -1.81
ARPC1B-216ENST00000474880 KRTAP15-1Q3LI76 137 aa3.68□□□□□ -1.82
ARPC1B-216ENST00000474880 KRTAP4-6Q9BYQ5 205 aa3.68□□□□□ -1.82
ARPC1B-216ENST00000474880 HMCN1Q96RW7 5635 aa3.67□□□□□ -1.82
ARPC1B-216ENST00000474880 LCE3CQ5T5A8 94 aa3.59□□□□□ -1.83
ARPC1B-216ENST00000474880 SPRR5A0A1B0GTR4 108 aa3.58□□□□□ -1.84
ARPC1B-216ENST00000474880 KRTAP5-10Q6L8G5 202 aa3.58□□□□□ -1.84
ARPC1B-216ENST00000474880 KRTAP5-5Q701N2 237 aaPredicted RBP3.58□□□□□ -1.84
ARPC1B-216ENST00000474880 AHNAK2Q8IVF2 5795 aa3.56□□□□□ -1.84
ARPC1B-216ENST00000474880 LOC100996750A0A140TA64 210 aa3.54□□□□□ -1.84
ARPC1B-216ENST00000474880 KRTAP20-2Q3LI61 65 aa3.53□□□□□ -1.84
ARPC1B-216ENST00000474880 BRK1Q8WUW1 75 aa3.52□□□□□ -1.85
ARPC1B-216ENST00000474880 KRTAP5-3Q6L8H2 238 aa3.49□□□□□ -1.85
ARPC1B-216ENST00000474880 KRTAP12-4P60329 112 aa3.48□□□□□ -1.85
ARPC1B-216ENST00000474880 KRTAP5-7Q6L8G8 165 aa3.44□□□□□ -1.86
ARPC1B-216ENST00000474880 SYNE1Q8NF91 8797 aaKnown RBP3.43□□□□□ -1.86
ARPC1B-216ENST00000474880 MT1AP04731 61 aa3.37□□□□□ -1.87
ARPC1B-216ENST00000474880 KRTAP9-6A8MVA2 160 aa3.35□□□□□ -1.87
ARPC1B-216ENST00000474880 KRTAP6-1Q3LI64 71 aa3.32□□□□□ -1.88
ARPC1B-216ENST00000474880 PMAIP1Q13794 54 aa3.31□□□□□ -1.88
ARPC1B-216ENST00000474880 KRTAP5-2Q701N4 177 aa3.27□□□□□ -1.89
ARPC1B-216ENST00000474880 KRTAP9-4Q9BYQ2 154 aa3.24□□□□□ -1.89
ARPC1B-216ENST00000474880 KRTAP4-11Q9BYQ6 195 aa3.23□□□□□ -1.89
ARPC1B-216ENST00000474880 SVIPQ8NHG7 77 aa3.18□□□□□ -1.9
ARPC1B-216ENST00000474880 KRTAP6-2Q3LI66 62 aa3.17□□□□□ -1.9
ARPC1B-216ENST00000474880 PRO0628Q9UI54 55 aa3.16□□□□□ -1.9
ARPC1B-216ENST00000474880 PRAC1Q96KF2 57 aa3.14□□□□□ -1.91
ARPC1B-216ENST00000474880 AHNAKQ09666 5890 aaKnown RBP3.14□□□□□ -1.91
ARPC1B-216ENST00000474880 KRTAP5-8O75690 187 aa3.13□□□□□ -1.91
ARPC1B-216ENST00000474880 MT3P25713 68 aa3.09□□□□□ -1.91
ARPC1B-216ENST00000474880 OBSCNQ5VST9 7968 aa3.04□□□□□ -1.92
ARPC1B-216ENST00000474880 KTN1-AS1Q86SY8 53 aa2.99□□□□□ -1.93
ARPC1B-216ENST00000474880 KRTAP9-9Q9BYP9 154 aa2.96□□□□□ -1.94
ARPC1B-216ENST00000474880 MUC5BQ9HC84 5762 aaPredicted RBP2.96□□□□□ -1.94
ARPC1B-216ENST00000474880 KRTAP5-1Q6L8H4 278 aa2.95□□□□□ -1.94
ARPC1B-216ENST00000474880 MUC5ACP98088 5654 aa2.95□□□□□ -1.94
ARPC1B-216ENST00000474880 LCE1EQ5T753 118 aa2.8□□□□□ -1.96
ARPC1B-216ENST00000474880 LUZP6Q538Z0 58 aa2.71□□□□□ -1.98
ARPC1B-216ENST00000474880 KRTAP4-2Q9BYR5 136 aa2.66□□□□□ -1.98
ARPC1B-216ENST00000474880 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
ARPC1B-216ENST00000474880 LCE3DQ9BYE3 92 aa2.62□□□□□ -1.99
ARPC1B-216ENST00000474880 LCE1CQ5T751 118 aa2.59□□□□□ -1.99
ARPC1B-216ENST00000474880 LCE3EQ5T5B0 92 aa2.49□□□□□ -2.01
ARPC1B-216ENST00000474880 KRTAP4-12Q9BQ66 201 aa2.44□□□□□ -2.02
ARPC1B-216ENST00000474880 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.37□□□□□ -2.03
ARPC1B-216ENST00000474880 KRTAP5-11Q6L8G4 156 aa2.35□□□□□ -2.03
ARPC1B-216ENST00000474880 LCE1FQ5T754 118 aa2.29□□□□□ -2.04
ARPC1B-216ENST00000474880 NDUFAF8A1L188 74 aa2.23□□□□□ -2.05
ARPC1B-216ENST00000474880 KRTAP21-2Q3LI59 83 aa2.18□□□□□ -2.06
ARPC1B-216ENST00000474880 H3BS24 57 aa2.13□□□□□ -2.07
ARPC1B-216ENST00000474880 PHGR1C9JFL3 82 aa2.09□□□□□ -2.07
ARPC1B-216ENST00000474880 A0A0A0MQY5 61 aa2.03□□□□□ -2.08
ARPC1B-216ENST00000474880 KRTAP4-4Q9BYR3 166 aa2.02□□□□□ -2.09
ARPC1B-216ENST00000474880 INE1O15225 51 aa1.92□□□□□ -2.1
ARPC1B-216ENST00000474880 PRM1P04553 51 aa1.92□□□□□ -2.1
ARPC1B-216ENST00000474880 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.11
ARPC1B-216ENST00000474880 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
ARPC1B-216ENST00000474880 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 75.5 ms