RNA–Protein interactions for RNA: ENST00000474725.5

EDEM3-206, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 2

Gene EDEM3, Length 1,911 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-206ENST00000474725 SYNE2Q8WXH0 6885 aaKnown RBP7.38□□□□□ -1.23
EDEM3-206ENST00000474725 SPRR2FQ96RM1 72 aa7.37□□□□□ -1.23
EDEM3-206ENST00000474725 KRTAP5-9P26371 169 aa7.31□□□□□ -1.24
EDEM3-206ENST00000474725 KRTAP6-3Q3LI67 103 aa7.27□□□□□ -1.25
EDEM3-206ENST00000474725 MT1LQ93083 61 aa7.23□□□□□ -1.25
EDEM3-206ENST00000474725 MUC12Q9UKN1 5478 aa7.2□□□□□ -1.26
EDEM3-206ENST00000474725 KRTAP19-3Q7Z4W3 81 aa7.13□□□□□ -1.27
EDEM3-206ENST00000474725 KRTAP9-7A8MTY7 169 aa7.12□□□□□ -1.27
EDEM3-206ENST00000474725 LCE1AQ5T7P2 110 aa7.07□□□□□ -1.28
EDEM3-206ENST00000474725 MT1GP13640 62 aa7.05□□□□□ -1.28
EDEM3-206ENST00000474725 LCE3CQ5T5A8 94 aa7.05□□□□□ -1.28
EDEM3-206ENST00000474725 SPRR2EP22531 72 aa7.03□□□□□ -1.28
EDEM3-206ENST00000474725 SPRR2BP35325 72 aa7.03□□□□□ -1.28
EDEM3-206ENST00000474725 SPRR2AP35326 72 aa7.03□□□□□ -1.28
EDEM3-206ENST00000474725 KRTAP19-4Q3LI73 84 aa7.03□□□□□ -1.28
EDEM3-206ENST00000474725 LCE5AQ5TCM9 118 aa7.03□□□□□ -1.28
EDEM3-206ENST00000474725 KRTAP4-7Q9BYR0 210 aa7.02□□□□□ -1.29
EDEM3-206ENST00000474725 MDN1Q9NU22 5596 aa6.99□□□□□ -1.29
EDEM3-206ENST00000474725 MT1MQ8N339 61 aa6.98□□□□□ -1.29
EDEM3-206ENST00000474725 KRTAP4-3Q9BYR4 195 aa6.88□□□□□ -1.31
EDEM3-206ENST00000474725 A0A0A0MQY5 61 aa6.85□□□□□ -1.31
EDEM3-206ENST00000474725 SPRR2DP22532 72 aa6.78□□□□□ -1.32
EDEM3-206ENST00000474725 NEBP20929 6669 aa6.73□□□□□ -1.33
EDEM3-206ENST00000474725 KRTAP9-6A8MVA2 160 aa6.69□□□□□ -1.34
EDEM3-206ENST00000474725 DSTQ03001 7570 aaKnown RBP6.57□□□□□ -1.36
EDEM3-206ENST00000474725 LCE3BQ5TA77 95 aa6.52□□□□□ -1.37
EDEM3-206ENST00000474725 KRTAP2-3P0C7H8 128 aa6.38□□□□□ -1.39
EDEM3-206ENST00000474725 KRTAP2-4Q9BYR9 128 aa6.38□□□□□ -1.39
EDEM3-206ENST00000474725 INE1O15225 51 aa6.31□□□□□ -1.4
EDEM3-206ENST00000474725 KRTAP20-1Q3LI63 56 aa6.31□□□□□ -1.4
EDEM3-206ENST00000474725 KRTAP5-5Q701N2 237 aaPredicted RBP6.3□□□□□ -1.4
EDEM3-206ENST00000474725 KRTAP4-12Q9BQ66 201 aa6.28□□□□□ -1.4
EDEM3-206ENST00000474725 KRTAP2-1Q9BYU5 128 aa6.27□□□□□ -1.41
EDEM3-206ENST00000474725 KRTAP2-2Q9BYT5 123 aa6.23□□□□□ -1.41
EDEM3-206ENST00000474725 KRTAP9-9Q9BYP9 154 aa6.19□□□□□ -1.42
EDEM3-206ENST00000474725 KRTAP9-4Q9BYQ2 154 aa6.19□□□□□ -1.42
EDEM3-206ENST00000474725 MT1AP04731 61 aa6.13□□□□□ -1.43
EDEM3-206ENST00000474725 KRTAP6-1Q3LI64 71 aa6.11□□□□□ -1.43
EDEM3-206ENST00000474725 KRTAP5-4Q6L8H1 288 aa6.08□□□□□ -1.44
EDEM3-206ENST00000474725 LCE4AQ5TA78 99 aa5.99□□□□□ -1.45
EDEM3-206ENST00000474725 LCE1DQ5T752 114 aa5.95□□□□□ -1.46
EDEM3-206ENST00000474725 SYNE1Q8NF91 8797 aaKnown RBP5.93□□□□□ -1.46
EDEM3-206ENST00000474725 MT4P47944 62 aa5.9□□□□□ -1.46
EDEM3-206ENST00000474725 KRTAP4-9Q9BYQ8 210 aa5.89□□□□□ -1.47
EDEM3-206ENST00000474725 KRTAP12-4P60329 112 aa5.87□□□□□ -1.47
EDEM3-206ENST00000474725 KRTAP4-2Q9BYR5 136 aa5.72□□□□□ -1.49
EDEM3-206ENST00000474725 KRTAP20-2Q3LI61 65 aa5.7□□□□□ -1.5
EDEM3-206ENST00000474725 HMCN1Q96RW7 5635 aa5.66□□□□□ -1.5
EDEM3-206ENST00000474725 KRTAP6-2Q3LI66 62 aa5.64□□□□□ -1.51
EDEM3-206ENST00000474725 MT3P25713 68 aa5.56□□□□□ -1.52
EDEM3-206ENST00000474725 KRTAP4-11Q9BYQ6 195 aa5.54□□□□□ -1.52
EDEM3-206ENST00000474725 KRTAP5-3Q6L8H2 238 aa5.5□□□□□ -1.53
EDEM3-206ENST00000474725 KRTAP5-2Q701N4 177 aa5.49□□□□□ -1.53
EDEM3-206ENST00000474725 LCE3DQ9BYE3 92 aa5.28□□□□□ -1.56
EDEM3-206ENST00000474725 LCE3EQ5T5B0 92 aa5.18□□□□□ -1.58
EDEM3-206ENST00000474725 OBSCNQ5VST9 7968 aa5.11□□□□□ -1.59
EDEM3-206ENST00000474725 AHNAK2Q8IVF2 5795 aa5.07□□□□□ -1.6
EDEM3-206ENST00000474725 KRTAP5-10Q6L8G5 202 aa4.9□□□□□ -1.62
EDEM3-206ENST00000474725 LCE1EQ5T753 118 aa4.85□□□□□ -1.63
EDEM3-206ENST00000474725 KRTAP5-8O75690 187 aa4.8□□□□□ -1.64
EDEM3-206ENST00000474725 KRTAP5-1Q6L8H4 278 aa4.78□□□□□ -1.64
EDEM3-206ENST00000474725 PRM1P04553 51 aa4.76□□□□□ -1.65
EDEM3-206ENST00000474725 GPR98Q8WXG9 6306 aa4.74□□□□□ -1.65
EDEM3-206ENST00000474725 LCE1BQ5T7P3 118 aa4.6□□□□□ -1.67
EDEM3-206ENST00000474725 KRTAP5-7Q6L8G8 165 aa4.6□□□□□ -1.67
EDEM3-206ENST00000474725 MUC5ACP98088 5654 aa4.53□□□□□ -1.68
EDEM3-206ENST00000474725 LCE1CQ5T751 118 aa4.52□□□□□ -1.69
EDEM3-206ENST00000474725 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.21□□□□□ -1.74
EDEM3-206ENST00000474725 MUC5BQ9HC84 5762 aaPredicted RBP4.06□□□□□ -1.76
EDEM3-206ENST00000474725 KRTAP5-11Q6L8G4 156 aa4□□□□□ -1.77
EDEM3-206ENST00000474725 KRTAP21-2Q3LI59 83 aa3.99□□□□□ -1.77
EDEM3-206ENST00000474725 AHNAKQ09666 5890 aaKnown RBP3.85□□□□□ -1.79
EDEM3-206ENST00000474725 LCE1FQ5T754 118 aa3.64□□□□□ -1.83
EDEM3-206ENST00000474725 KRTAP4-4Q9BYR3 166 aa3.59□□□□□ -1.83
EDEM3-206ENST00000474725 PHGR1C9JFL3 82 aa3.44□□□□□ -1.86
EDEM3-206ENST00000474725 MUC19Q7Z5P9 8384 aa3.05□□□□□ -1.92
EDEM3-206ENST00000474725 KRTAP21-1Q3LI58 79 aa2.98□□□□□ -1.93
EDEM3-206ENST00000474725 MUC16Q8WXI7 14507 aa2.24□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 62.5 ms