RNA–Protein interactions for RNA: ENST00000474475.1

TNFRSF9-202, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-202ENST00000474475 KRTAP19-3Q7Z4W3 81 aa3.26□□□□□ -1.89
TNFRSF9-202ENST00000474475 SERP2Q8N6R1 65 aa3.25□□□□□ -1.89
TNFRSF9-202ENST00000474475 KRTAP9-6A8MVA2 160 aa3.24□□□□□ -1.89
TNFRSF9-202ENST00000474475 COA5Q86WW8 74 aa3.24□□□□□ -1.89
TNFRSF9-202ENST00000474475 A0A0D9SG42 100 aa3.23□□□□□ -1.89
TNFRSF9-202ENST00000474475 SPATA8Q6RVD6 105 aa3.21□□□□□ -1.9
TNFRSF9-202ENST00000474475 SEC61GP60059 68 aa3.19□□□□□ -1.9
TNFRSF9-202ENST00000474475 KRTAP19-5Q3LI72 72 aa3.19□□□□□ -1.9
TNFRSF9-202ENST00000474475 SPINT4Q6UDR6 99 aa3.19□□□□□ -1.9
TNFRSF9-202ENST00000474475 SERP1Q9Y6X1 66 aa3.19□□□□□ -1.9
TNFRSF9-202ENST00000474475 CYSTM1Q9H1C7 97 aa3.18□□□□□ -1.9
TNFRSF9-202ENST00000474475 A0A1B0GU33 70 aa3.17□□□□□ -1.9
TNFRSF9-202ENST00000474475 MT1GP13640 62 aa3.17□□□□□ -1.9
TNFRSF9-202ENST00000474475 KRTAP12-1P59990 96 aa3.17□□□□□ -1.9
TNFRSF9-202ENST00000474475 HMCN1Q96RW7 5635 aa3.15□□□□□ -1.91
TNFRSF9-202ENST00000474475 AHNAK2Q8IVF2 5795 aa3.14□□□□□ -1.91
TNFRSF9-202ENST00000474475 KRTAP5-10Q6L8G5 202 aa3.13□□□□□ -1.91
TNFRSF9-202ENST00000474475 PP632Q6XCG6 107 aa3.13□□□□□ -1.91
TNFRSF9-202ENST00000474475 MT1MQ8N339 61 aa3.13□□□□□ -1.91
TNFRSF9-202ENST00000474475 OBSCNQ5VST9 7968 aa3.13□□□□□ -1.91
TNFRSF9-202ENST00000474475 COX7CP15954 63 aa3.12□□□□□ -1.91
TNFRSF9-202ENST00000474475 H7BZZ5 65 aa3.11□□□□□ -1.91
TNFRSF9-202ENST00000474475 MT4P47944 62 aa3.11□□□□□ -1.91
TNFRSF9-202ENST00000474475 MT1LQ93083 61 aa3.11□□□□□ -1.91
TNFRSF9-202ENST00000474475 LCE3EQ5T5B0 92 aa3.09□□□□□ -1.91
TNFRSF9-202ENST00000474475 KRTAP4-3Q9BYR4 195 aa3.08□□□□□ -1.92
TNFRSF9-202ENST00000474475 SMIM26A0A096LP01 95 aa3.07□□□□□ -1.92
TNFRSF9-202ENST00000474475 A0A1B0GU69 56 aa3.07□□□□□ -1.92
TNFRSF9-202ENST00000474475 LCE3AQ5TA76 89 aa3.07□□□□□ -1.92
TNFRSF9-202ENST00000474475 KRTAP5-7Q6L8G8 165 aa3.07□□□□□ -1.92
TNFRSF9-202ENST00000474475 C10orf95Q9H7T3 257 aa3.06□□□□□ -1.92
TNFRSF9-202ENST00000474475 TNP1P09430 55 aa3.03□□□□□ -1.92
TNFRSF9-202ENST00000474475 SPRR5A0A1B0GTR4 108 aa3.01□□□□□ -1.93
TNFRSF9-202ENST00000474475 KRTAP12-3P60328 96 aa2.95□□□□□ -1.94
TNFRSF9-202ENST00000474475 ANAPC13Q9BS18 74 aa2.94□□□□□ -1.94
TNFRSF9-202ENST00000474475 PRR15LQ9BU68 103 aa2.92□□□□□ -1.94
TNFRSF9-202ENST00000474475 CCDC179H3BU77 68 aa2.91□□□□□ -1.94
TNFRSF9-202ENST00000474475 LINC01558Q9Y6Z2 57 aa2.9□□□□□ -1.95
TNFRSF9-202ENST00000474475 KRTAP5-2Q701N4 177 aa2.89□□□□□ -1.95
TNFRSF9-202ENST00000474475 KRTAP5-5Q701N2 237 aaPredicted RBP2.88□□□□□ -1.95
TNFRSF9-202ENST00000474475 ATP5EP56381 51 aaPredicted RBP2.87□□□□□ -1.95
TNFRSF9-202ENST00000474475 KRTAP20-2Q3LI61 65 aa2.87□□□□□ -1.95
TNFRSF9-202ENST00000474475 UQCR11O14957 56 aa2.84□□□□□ -1.95
TNFRSF9-202ENST00000474475 KRTAP25-1Q3LHN0 102 aa2.81□□□□□ -1.96
TNFRSF9-202ENST00000474475 KRTAP12-4P60329 112 aa2.8□□□□□ -1.96
TNFRSF9-202ENST00000474475 SYNE1Q8NF91 8797 aaKnown RBP2.8□□□□□ -1.96
TNFRSF9-202ENST00000474475 TMEM258P61165 79 aa2.77□□□□□ -1.97
TNFRSF9-202ENST00000474475 MIR22HGQ0VDD5 57 aa2.77□□□□□ -1.97
TNFRSF9-202ENST00000474475 K7ERS5 55 aa2.71□□□□□ -1.98
TNFRSF9-202ENST00000474475 PSPHP1O15172 72 aa2.67□□□□□ -1.98
TNFRSF9-202ENST00000474475 MT1AP04731 61 aa2.65□□□□□ -1.99
TNFRSF9-202ENST00000474475 KRTAP6-1Q3LI64 71 aa2.65□□□□□ -1.99
TNFRSF9-202ENST00000474475 MUC5ACP98088 5654 aa2.65□□□□□ -1.99
TNFRSF9-202ENST00000474475 AHNAKQ09666 5890 aaKnown RBP2.65□□□□□ -1.99
TNFRSF9-202ENST00000474475 MUC5BQ9HC84 5762 aaPredicted RBP2.63□□□□□ -1.99
TNFRSF9-202ENST00000474475 V9GYY9 64 aa2.63□□□□□ -1.99
TNFRSF9-202ENST00000474475 Q1T7F1 81 aa2.62□□□□□ -1.99
TNFRSF9-202ENST00000474475 KRTAP5-8O75690 187 aa2.6□□□□□ -1.99
TNFRSF9-202ENST00000474475 LCE3DQ9BYE3 92 aa2.57□□□□□ -2
TNFRSF9-202ENST00000474475 CDC42SE1Q9NRR8 79 aa2.57□□□□□ -2
TNFRSF9-202ENST00000474475 A6NED7 52 aa2.56□□□□□ -2
TNFRSF9-202ENST00000474475 KRTAP6-2Q3LI66 62 aa2.54□□□□□ -2
TNFRSF9-202ENST00000474475 ROMO1P60602 79 aa2.53□□□□□ -2
TNFRSF9-202ENST00000474475 RPS28P62857 69 aaKnown RBP2.52□□□□□ -2.01
TNFRSF9-202ENST00000474475 LCE1CQ5T751 118 aa2.41□□□□□ -2.02
TNFRSF9-202ENST00000474475 LCE1BQ5T7P3 118 aa2.41□□□□□ -2.02
TNFRSF9-202ENST00000474475 LUZP6Q538Z0 58 aa2.15□□□□□ -2.07
TNFRSF9-202ENST00000474475 BRK1Q8WUW1 75 aa2.06□□□□□ -2.08
TNFRSF9-202ENST00000474475 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
TNFRSF9-202ENST00000474475 PRO0628Q9UI54 55 aa1.96□□□□□ -2.1
TNFRSF9-202ENST00000474475 PMAIP1Q13794 54 aa1.92□□□□□ -2.1
TNFRSF9-202ENST00000474475 PHGR1C9JFL3 82 aa1.86□□□□□ -2.11
TNFRSF9-202ENST00000474475 KRTAP21-2Q3LI59 83 aa1.75□□□□□ -2.13
TNFRSF9-202ENST00000474475 KTN1-AS1Q86SY8 53 aa1.62□□□□□ -2.15
TNFRSF9-202ENST00000474475 KRTAP21-1Q3LI58 79 aa1.41□□□□□ -2.18
TNFRSF9-202ENST00000474475 PRM1P04553 51 aa1.29□□□□□ -2.2
TNFRSF9-202ENST00000474475 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.23
TNFRSF9-202ENST00000474475 INE1O15225 51 aa1.05□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 61.9 ms