RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 KRTAP8-1Q8IUC2 63 aa2.81□□□□□ -1.96
VPS50-211ENST00000474412 PLAC4Q8WY50 150 aa2.81□□□□□ -1.96
VPS50-211ENST00000474412 MDN1Q9NU22 5596 aa2.8□□□□□ -1.96
VPS50-211ENST00000474412 C20orf197Q8N268 126 aa2.79□□□□□ -1.96
VPS50-211ENST00000474412 SNURFQ9Y675 71 aa2.79□□□□□ -1.96
VPS50-211ENST00000474412 TRAV7A0A075B6U4 112 aa2.78□□□□□ -1.96
VPS50-211ENST00000474412 SERP2Q8N6R1 65 aa2.78□□□□□ -1.96
VPS50-211ENST00000474412 SERP1Q9Y6X1 66 aa2.77□□□□□ -1.97
VPS50-211ENST00000474412 SMIM26A0A096LP01 95 aa2.76□□□□□ -1.97
VPS50-211ENST00000474412 KRTAP13-4Q3LI77 160 aa2.76□□□□□ -1.97
VPS50-211ENST00000474412 ACYP2P14621 99 aa2.75□□□□□ -1.97
VPS50-211ENST00000474412 CYSTM1Q9H1C7 97 aa2.74□□□□□ -1.97
VPS50-211ENST00000474412 CHKB-CPT1BH3BT56 60 aa2.73□□□□□ -1.97
VPS50-211ENST00000474412 KRTAP2-3P0C7H8 128 aa2.73□□□□□ -1.97
VPS50-211ENST00000474412 KRTAP2-4Q9BYR9 128 aa2.73□□□□□ -1.97
VPS50-211ENST00000474412 SPRR2DP22532 72 aa2.71□□□□□ -1.98
VPS50-211ENST00000474412 ATP5EP56381 51 aaPredicted RBP2.71□□□□□ -1.98
VPS50-211ENST00000474412 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
VPS50-211ENST00000474412 PMAIP1Q13794 54 aa2.7□□□□□ -1.98
VPS50-211ENST00000474412 CAMK2N1Q7Z7J9 78 aa2.7□□□□□ -1.98
VPS50-211ENST00000474412 SPTSSBQ8NFR3 76 aa2.69□□□□□ -1.98
VPS50-211ENST00000474412 BRK1Q8WUW1 75 aa2.69□□□□□ -1.98
VPS50-211ENST00000474412 H7BZZ5 65 aa2.68□□□□□ -1.98
VPS50-211ENST00000474412 SPANXA2-OT1Q8N9U9 137 aa2.68□□□□□ -1.98
VPS50-211ENST00000474412 COA5Q86WW8 74 aa2.67□□□□□ -1.98
VPS50-211ENST00000474412 KRTAP2-1Q9BYU5 128 aa2.65□□□□□ -1.99
VPS50-211ENST00000474412 A0A0D9SG42 100 aa2.62□□□□□ -1.99
VPS50-211ENST00000474412 KRTAP19-7Q3SYF9 63 aa2.62□□□□□ -1.99
VPS50-211ENST00000474412 SPATA8Q6RVD6 105 aa2.62□□□□□ -1.99
VPS50-211ENST00000474412 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
VPS50-211ENST00000474412 Q1T7F1 81 aa2.6□□□□□ -1.99
VPS50-211ENST00000474412 MT1EP04732 61 aa2.59□□□□□ -1.99
VPS50-211ENST00000474412 KTN1-AS1Q86SY8 53 aa2.58□□□□□ -2
VPS50-211ENST00000474412 KRTAP12-1P59990 96 aa2.57□□□□□ -2
VPS50-211ENST00000474412 KRTAP5-7Q6L8G8 165 aa2.56□□□□□ -2
VPS50-211ENST00000474412 SPINT4Q6UDR6 99 aa2.55□□□□□ -2
VPS50-211ENST00000474412 KRTAP19-3Q7Z4W3 81 aa2.55□□□□□ -2
VPS50-211ENST00000474412 A0A1B0GU33 70 aa2.54□□□□□ -2
VPS50-211ENST00000474412 KRTAP19-5Q3LI72 72 aa2.53□□□□□ -2
VPS50-211ENST00000474412 PSPHP1O15172 72 aa2.51□□□□□ -2.01
VPS50-211ENST00000474412 DSTQ03001 7570 aaKnown RBP2.49□□□□□ -2.01
VPS50-211ENST00000474412 A0A1B0GU69 56 aa2.48□□□□□ -2.01
VPS50-211ENST00000474412 MT1MQ8N339 61 aa2.47□□□□□ -2.01
VPS50-211ENST00000474412 MT1LQ93083 61 aa2.47□□□□□ -2.01
VPS50-211ENST00000474412 C10orf95Q9H7T3 257 aa2.47□□□□□ -2.01
VPS50-211ENST00000474412 CDC42SE1Q9NRR8 79 aa2.47□□□□□ -2.01
VPS50-211ENST00000474412 PRR15LQ9BU68 103 aa2.45□□□□□ -2.02
VPS50-211ENST00000474412 A6NED7 52 aa2.44□□□□□ -2.02
VPS50-211ENST00000474412 MT1GP13640 62 aa2.44□□□□□ -2.02
VPS50-211ENST00000474412 LINC01558Q9Y6Z2 57 aa2.42□□□□□ -2.02
VPS50-211ENST00000474412 MT4P47944 62 aa2.4□□□□□ -2.03
VPS50-211ENST00000474412 TNP1P09430 55 aa2.39□□□□□ -2.03
VPS50-211ENST00000474412 GPR98Q8WXG9 6306 aa2.34□□□□□ -2.03
VPS50-211ENST00000474412 KRTAP12-3P60328 96 aa2.33□□□□□ -2.04
VPS50-211ENST00000474412 HMCN1Q96RW7 5635 aa2.3□□□□□ -2.04
VPS50-211ENST00000474412 UQCR11O14957 56 aa2.29□□□□□ -2.04
VPS50-211ENST00000474412 AHNAK2Q8IVF2 5795 aa2.27□□□□□ -2.05
VPS50-211ENST00000474412 KRTAP12-4P60329 112 aa2.26□□□□□ -2.05
VPS50-211ENST00000474412 MIR22HGQ0VDD5 57 aa2.26□□□□□ -2.05
VPS50-211ENST00000474412 KRTAP5-10Q6L8G5 202 aa2.26□□□□□ -2.05
VPS50-211ENST00000474412 ROMO1P60602 79 aa2.25□□□□□ -2.05
VPS50-211ENST00000474412 KRTAP25-1Q3LHN0 102 aa2.23□□□□□ -2.05
VPS50-211ENST00000474412 KRTAP20-2Q3LI61 65 aa2.23□□□□□ -2.05
VPS50-211ENST00000474412 SYNE1Q8NF91 8797 aaKnown RBP2.23□□□□□ -2.05
VPS50-211ENST00000474412 KRTAP21-2Q3LI59 83 aa2.21□□□□□ -2.06
VPS50-211ENST00000474412 K7ERS5 55 aa2.15□□□□□ -2.07
VPS50-211ENST00000474412 KRTAP6-1Q3LI64 71 aa2.11□□□□□ -2.07
VPS50-211ENST00000474412 MT1AP04731 61 aa2.09□□□□□ -2.07
VPS50-211ENST00000474412 LUZP6Q538Z0 58 aa2.04□□□□□ -2.08
VPS50-211ENST00000474412 KRTAP6-2Q3LI66 62 aa2□□□□□ -2.09
VPS50-211ENST00000474412 MUC5ACP98088 5654 aa1.85□□□□□ -2.11
VPS50-211ENST00000474412 MUC5BQ9HC84 5762 aaPredicted RBP1.8□□□□□ -2.12
VPS50-211ENST00000474412 AHNAKQ09666 5890 aaKnown RBP1.8□□□□□ -2.12
VPS50-211ENST00000474412 INE1O15225 51 aa1.75□□□□□ -2.13
VPS50-211ENST00000474412 PHGR1C9JFL3 82 aa1.31□□□□□ -2.2
VPS50-211ENST00000474412 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
VPS50-211ENST00000474412 PRM1P04553 51 aa1.1□□□□□ -2.23
VPS50-211ENST00000474412 KRTAP21-1Q3LI58 79 aa0.95□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 66.4 ms