RNA–Protein interactions for RNA: ENST00000473835.6

U2SURP-208, Transcript of U2 snRNP associated SURP domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene U2SURP, Length 7,276 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-208ENST00000473835 LOC100996750A0A140TA64 210 aa1.59□□□□□ -2.16
U2SURP-208ENST00000473835 KRTAP4-6Q9BYQ5 205 aa1.59□□□□□ -2.16
U2SURP-208ENST00000473835 MT1LQ93083 61 aa1.58□□□□□ -2.16
U2SURP-208ENST00000473835 FCGBPQ9Y6R7 5405 aaPredicted RBP1.56□□□□□ -2.16
U2SURP-208ENST00000473835 MT1EP04732 61 aa1.55□□□□□ -2.16
U2SURP-208ENST00000473835 GPR98Q8WXG9 6306 aa1.54□□□□□ -2.16
U2SURP-208ENST00000473835 KRTAP4-3Q9BYR4 195 aa1.5□□□□□ -2.17
U2SURP-208ENST00000473835 KRTAP12-4P60329 112 aa1.49□□□□□ -2.17
U2SURP-208ENST00000473835 MUC5BQ9HC84 5762 aaPredicted RBP1.47□□□□□ -2.17
U2SURP-208ENST00000473835 MT1GP13640 62 aa1.47□□□□□ -2.17
U2SURP-208ENST00000473835 MUC12Q9UKN1 5478 aa1.46□□□□□ -2.18
U2SURP-208ENST00000473835 KRTAP9-6A0A140TA67 174 aa1.45□□□□□ -2.18
U2SURP-208ENST00000473835 MDN1Q9NU22 5596 aa1.44□□□□□ -2.18
U2SURP-208ENST00000473835 KRTAP5-9P26371 169 aa1.44□□□□□ -2.18
U2SURP-208ENST00000473835 MT1MQ8N339 61 aa1.43□□□□□ -2.18
U2SURP-208ENST00000473835 KRTAP5-5Q701N2 237 aaPredicted RBP1.42□□□□□ -2.18
U2SURP-208ENST00000473835 KRTAP9-2Q9BYQ4 174 aa1.42□□□□□ -2.18
U2SURP-208ENST00000473835 KRTAP4-9Q9BYQ8 210 aa1.42□□□□□ -2.18
U2SURP-208ENST00000473835 KRTAP19-3Q7Z4W3 81 aa1.41□□□□□ -2.18
U2SURP-208ENST00000473835 HMCN1Q96RW7 5635 aa1.41□□□□□ -2.18
U2SURP-208ENST00000473835 LCE5AQ5TCM9 118 aa1.4□□□□□ -2.18
U2SURP-208ENST00000473835 KRTAP9-7A8MTY7 169 aa1.4□□□□□ -2.19
U2SURP-208ENST00000473835 MT1AP04731 61 aa1.39□□□□□ -2.19
U2SURP-208ENST00000473835 LCE1AQ5T7P2 110 aa1.39□□□□□ -2.19
U2SURP-208ENST00000473835 KRTAP4-12Q9BQ66 201 aa1.38□□□□□ -2.19
U2SURP-208ENST00000473835 LCE3BQ5TA77 95 aa1.37□□□□□ -2.19
U2SURP-208ENST00000473835 CRCT1Q9UGL9 99 aa1.37□□□□□ -2.19
U2SURP-208ENST00000473835 FSIP2Q5CZC0 6907 aa1.36□□□□□ -2.19
U2SURP-208ENST00000473835 DSTQ03001 7570 aaKnown RBP1.35□□□□□ -2.19
U2SURP-208ENST00000473835 PRM1P04553 51 aa1.35□□□□□ -2.19
U2SURP-208ENST00000473835 KRTAP6-1Q3LI64 71 aa1.35□□□□□ -2.19
U2SURP-208ENST00000473835 KRTAP6-3Q3LI67 103 aa1.35□□□□□ -2.19
U2SURP-208ENST00000473835 MACF1Q9UPN3 7388 aaKnown RBP1.34□□□□□ -2.19
U2SURP-208ENST00000473835 LCE3DQ9BYE3 92 aa1.32□□□□□ -2.2
U2SURP-208ENST00000473835 LCE3EQ5T5B0 92 aa1.32□□□□□ -2.2
U2SURP-208ENST00000473835 SYNE1Q8NF91 8797 aaKnown RBP1.3□□□□□ -2.2
U2SURP-208ENST00000473835 NEBP20929 6669 aa1.3□□□□□ -2.2
U2SURP-208ENST00000473835 KRTAP6-2Q3LI66 62 aa1.28□□□□□ -2.2
U2SURP-208ENST00000473835 SPRR2FQ96RM1 72 aa1.28□□□□□ -2.2
U2SURP-208ENST00000473835 AHNAK2Q8IVF2 5795 aa1.28□□□□□ -2.2
U2SURP-208ENST00000473835 KRTAP2-2Q9BYT5 123 aa1.28□□□□□ -2.21
U2SURP-208ENST00000473835 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.27□□□□□ -2.21
U2SURP-208ENST00000473835 KRTAP5-4Q6L8H1 288 aa1.25□□□□□ -2.21
U2SURP-208ENST00000473835 SYNE2Q8WXH0 6885 aaKnown RBP1.25□□□□□ -2.21
U2SURP-208ENST00000473835 AHNAKQ09666 5890 aaKnown RBP1.23□□□□□ -2.21
U2SURP-208ENST00000473835 KRTAP5-2Q701N4 177 aa1.22□□□□□ -2.21
U2SURP-208ENST00000473835 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.21□□□□□ -2.22
U2SURP-208ENST00000473835 SPRR2EP22531 72 aa1.19□□□□□ -2.22
U2SURP-208ENST00000473835 SPRR2BP35325 72 aa1.19□□□□□ -2.22
U2SURP-208ENST00000473835 SPRR2AP35326 72 aa1.19□□□□□ -2.22
U2SURP-208ENST00000473835 OBSCNQ5VST9 7968 aa1.16□□□□□ -2.22
U2SURP-208ENST00000473835 SPRR2DP22532 72 aa1.16□□□□□ -2.22
U2SURP-208ENST00000473835 LCE4AQ5TA78 99 aa1.15□□□□□ -2.22
U2SURP-208ENST00000473835 KRTAP20-1Q3LI63 56 aa1.14□□□□□ -2.23
U2SURP-208ENST00000473835 LCE1EQ5T753 118 aa1.14□□□□□ -2.23
U2SURP-208ENST00000473835 MT3P25713 68 aa1.13□□□□□ -2.23
U2SURP-208ENST00000473835 LCE1DQ5T752 114 aa1.12□□□□□ -2.23
U2SURP-208ENST00000473835 KRTAP5-3Q6L8H2 238 aa1.09□□□□□ -2.24
U2SURP-208ENST00000473835 KRTAP20-2Q3LI61 65 aa1.08□□□□□ -2.24
U2SURP-208ENST00000473835 MUC5ACP98088 5654 aa1.07□□□□□ -2.24
U2SURP-208ENST00000473835 KRTAP4-2Q9BYR5 136 aa1.06□□□□□ -2.24
U2SURP-208ENST00000473835 KRTAP5-10Q6L8G5 202 aa1.01□□□□□ -2.25
U2SURP-208ENST00000473835 KRTAP4-11Q9BYQ6 195 aa1.01□□□□□ -2.25
U2SURP-208ENST00000473835 KRTAP5-7Q6L8G8 165 aa1□□□□□ -2.25
U2SURP-208ENST00000473835 KRTAP5-1Q6L8H4 278 aa0.99□□□□□ -2.25
U2SURP-208ENST00000473835 KRTAP5-8O75690 187 aa0.99□□□□□ -2.25
U2SURP-208ENST00000473835 LCE1CQ5T751 118 aa0.94□□□□□ -2.26
U2SURP-208ENST00000473835 LCE1BQ5T7P3 118 aa0.94□□□□□ -2.26
U2SURP-208ENST00000473835 MT4P47944 62 aa0.92□□□□□ -2.26
U2SURP-208ENST00000473835 KRTAP21-1Q3LI58 79 aa0.91□□□□□ -2.26
U2SURP-208ENST00000473835 KRTAP21-2Q3LI59 83 aa0.89□□□□□ -2.27
U2SURP-208ENST00000473835 LCE1FQ5T754 118 aa0.88□□□□□ -2.27
U2SURP-208ENST00000473835 KRTAP5-11Q6L8G4 156 aa0.86□□□□□ -2.27
U2SURP-208ENST00000473835 MUC19Q7Z5P9 8384 aa0.78□□□□□ -2.28
U2SURP-208ENST00000473835 KRTAP4-4Q9BYR3 166 aa0.77□□□□□ -2.29
U2SURP-208ENST00000473835 PHGR1C9JFL3 82 aa0.69□□□□□ -2.3
U2SURP-208ENST00000473835 MUC16Q8WXI7 14507 aa0.46□□□□□ -2.34
Retrieved 77 of 20,778 RNA–protein pairs in 13 ms