RNA–Protein interactions for RNA: ENST00000473614.1

FN1-218, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-218ENST00000473614 KRTAP25-1Q3LHN0 102 aa2.94□□□□□ -1.94
FN1-218ENST00000473614 USH2AO75445 5202 aa2.92□□□□□ -1.94
FN1-218ENST00000473614 PRO2289Q9P1D8 64 aa2.91□□□□□ -1.94
FN1-218ENST00000473614 TNP1P09430 55 aa2.9□□□□□ -1.95
FN1-218ENST00000473614 KRTAP10-12P60413 245 aa2.9□□□□□ -1.95
FN1-218ENST00000473614 KRTAP19-6Q3LI70 58 aa2.88□□□□□ -1.95
FN1-218ENST00000473614 LCE1EQ5T753 118 aa2.85□□□□□ -1.95
FN1-218ENST00000473614 PP632Q6XCG6 107 aa2.85□□□□□ -1.95
FN1-218ENST00000473614 SSPOA2VEC9 5147 aa2.84□□□□□ -1.95
FN1-218ENST00000473614 LCE3AQ5TA76 89 aa2.77□□□□□ -1.97
FN1-218ENST00000473614 KRTAP8-1Q8IUC2 63 aa2.77□□□□□ -1.97
FN1-218ENST00000473614 LCE3CQ5T5A8 94 aa2.76□□□□□ -1.97
FN1-218ENST00000473614 FSIP2Q5CZC0 6907 aa2.73□□□□□ -1.97
FN1-218ENST00000473614 FCGBPQ9Y6R7 5405 aaPredicted RBP2.72□□□□□ -1.97
FN1-218ENST00000473614 CRCT1Q9UGL9 99 aa2.7□□□□□ -1.98
FN1-218ENST00000473614 KRTAP5-1Q6L8H4 278 aa2.68□□□□□ -1.98
FN1-218ENST00000473614 KRTAP12-3P60328 96 aa2.67□□□□□ -1.98
FN1-218ENST00000473614 KRTAP19-5Q3LI72 72 aa2.65□□□□□ -1.99
FN1-218ENST00000473614 KRTAP19-7Q3SYF9 63 aa2.65□□□□□ -1.99
FN1-218ENST00000473614 KRTAP5-9P26371 169 aa2.63□□□□□ -1.99
FN1-218ENST00000473614 KMT2DO14686 5537 aa2.63□□□□□ -1.99
FN1-218ENST00000473614 MT1EP04732 61 aa2.6□□□□□ -1.99
FN1-218ENST00000473614 KRTAP5-4Q6L8H1 288 aa2.6□□□□□ -1.99
FN1-218ENST00000473614 KRTAP9-6A8MVA2 160 aa2.59□□□□□ -1.99
FN1-218ENST00000473614 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
FN1-218ENST00000473614 SPRR5A0A1B0GTR4 108 aa2.56□□□□□ -2
FN1-218ENST00000473614 MT1LQ93083 61 aa2.54□□□□□ -2
FN1-218ENST00000473614 LCE3EQ5T5B0 92 aa2.51□□□□□ -2.01
FN1-218ENST00000473614 MACF1Q9UPN3 7388 aaKnown RBP2.49□□□□□ -2.01
FN1-218ENST00000473614 SYNE2Q8WXH0 6885 aaKnown RBP2.49□□□□□ -2.01
FN1-218ENST00000473614 KRTAP19-3Q7Z4W3 81 aa2.49□□□□□ -2.01
FN1-218ENST00000473614 SPRR2FQ96RM1 72 aa2.49□□□□□ -2.01
FN1-218ENST00000473614 MT1GP13640 62 aa2.48□□□□□ -2.01
FN1-218ENST00000473614 KRTAP6-3Q3LI67 103 aa2.48□□□□□ -2.01
FN1-218ENST00000473614 MUC12Q9UKN1 5478 aa2.44□□□□□ -2.02
FN1-218ENST00000473614 MT1MQ8N339 61 aa2.43□□□□□ -2.02
FN1-218ENST00000473614 LUZP6Q538Z0 58 aa2.38□□□□□ -2.03
FN1-218ENST00000473614 SPRR2EP22531 72 aa2.36□□□□□ -2.03
FN1-218ENST00000473614 SPRR2BP35325 72 aa2.36□□□□□ -2.03
FN1-218ENST00000473614 SPRR2AP35326 72 aa2.36□□□□□ -2.03
FN1-218ENST00000473614 KRTAP4-3Q9BYR4 195 aa2.36□□□□□ -2.03
FN1-218ENST00000473614 MDN1Q9NU22 5596 aa2.36□□□□□ -2.03
FN1-218ENST00000473614 NEBP20929 6669 aa2.32□□□□□ -2.04
FN1-218ENST00000473614 SPRR2DP22532 72 aa2.28□□□□□ -2.04
FN1-218ENST00000473614 KRTAP5-5Q701N2 237 aaPredicted RBP2.24□□□□□ -2.05
FN1-218ENST00000473614 OBSCNQ5VST9 7968 aa2.23□□□□□ -2.05
FN1-218ENST00000473614 KRTAP2-3P0C7H8 128 aa2.23□□□□□ -2.05
FN1-218ENST00000473614 KRTAP2-4Q9BYR9 128 aa2.23□□□□□ -2.05
FN1-218ENST00000473614 KRTAP2-1Q9BYU5 128 aa2.23□□□□□ -2.05
FN1-218ENST00000473614 KRTAP5-2Q701N4 177 aa2.19□□□□□ -2.06
FN1-218ENST00000473614 DSTQ03001 7570 aaKnown RBP2.18□□□□□ -2.06
FN1-218ENST00000473614 MT1AP04731 61 aa2.17□□□□□ -2.06
FN1-218ENST00000473614 KRTAP20-1Q3LI63 56 aa2.15□□□□□ -2.07
FN1-218ENST00000473614 KRTAP6-1Q3LI64 71 aa2.13□□□□□ -2.07
FN1-218ENST00000473614 LCE3DQ9BYE3 92 aa2.1□□□□□ -2.07
FN1-218ENST00000473614 KRTAP12-4P60329 112 aa2.03□□□□□ -2.08
FN1-218ENST00000473614 SYNE1Q8NF91 8797 aaKnown RBP1.98□□□□□ -2.09
FN1-218ENST00000473614 INE1O15225 51 aa1.97□□□□□ -2.09
FN1-218ENST00000473614 KRTAP20-2Q3LI61 65 aa1.96□□□□□ -2.1
FN1-218ENST00000473614 MT4P47944 62 aa1.95□□□□□ -2.1
FN1-218ENST00000473614 KRTAP6-2Q3LI66 62 aa1.95□□□□□ -2.1
FN1-218ENST00000473614 HMCN1Q96RW7 5635 aa1.92□□□□□ -2.1
FN1-218ENST00000473614 LCE1CQ5T751 118 aa1.91□□□□□ -2.1
FN1-218ENST00000473614 LCE1BQ5T7P3 118 aa1.91□□□□□ -2.1
FN1-218ENST00000473614 GPR98Q8WXG9 6306 aa1.88□□□□□ -2.11
FN1-218ENST00000473614 KRTAP5-8O75690 187 aa1.88□□□□□ -2.11
FN1-218ENST00000473614 AHNAK2Q8IVF2 5795 aa1.78□□□□□ -2.12
FN1-218ENST00000473614 KRTAP5-10Q6L8G5 202 aa1.65□□□□□ -2.15
FN1-218ENST00000473614 KRTAP5-7Q6L8G8 165 aa1.64□□□□□ -2.15
FN1-218ENST00000473614 MUC5ACP98088 5654 aa1.57□□□□□ -2.16
FN1-218ENST00000473614 PRM1P04553 51 aa1.56□□□□□ -2.16
FN1-218ENST00000473614 AHNAKQ09666 5890 aaKnown RBP1.49□□□□□ -2.17
FN1-218ENST00000473614 MUC19Q7Z5P9 8384 aa1.47□□□□□ -2.17
FN1-218ENST00000473614 MUC5BQ9HC84 5762 aaPredicted RBP1.45□□□□□ -2.18
FN1-218ENST00000473614 KRTAP21-2Q3LI59 83 aa1.42□□□□□ -2.18
FN1-218ENST00000473614 PHGR1C9JFL3 82 aa1.22□□□□□ -2.21
FN1-218ENST00000473614 KRTAP21-1Q3LI58 79 aa1□□□□□ -2.25
FN1-218ENST00000473614 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 11.5 ms