RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 KRTAP12-2P59991 146 aa3.67□□□□□ -1.82
SMC4-214ENST00000472991 UQCR11O14957 56 aa3.66□□□□□ -1.82
SMC4-214ENST00000472991 Q1T7F1 81 aa3.66□□□□□ -1.82
SMC4-214ENST00000472991 KRTAP6-3Q3LI67 103 aa3.66□□□□□ -1.82
SMC4-214ENST00000472991 OBSCNQ5VST9 7968 aa3.65□□□□□ -1.82
SMC4-214ENST00000472991 PSPHP1O15172 72 aa3.65□□□□□ -1.83
SMC4-214ENST00000472991 KMT2DO14686 5537 aa3.63□□□□□ -1.83
SMC4-214ENST00000472991 RPS28P62857 69 aaKnown RBP3.63□□□□□ -1.83
SMC4-214ENST00000472991 MIR22HGQ0VDD5 57 aa3.6□□□□□ -1.83
SMC4-214ENST00000472991 KRTAP8-1Q8IUC2 63 aa3.58□□□□□ -1.84
SMC4-214ENST00000472991 A6NED7 52 aa3.54□□□□□ -1.84
SMC4-214ENST00000472991 SPRR2FQ96RM1 72 aa3.54□□□□□ -1.84
SMC4-214ENST00000472991 MUC12Q9UKN1 5478 aa3.53□□□□□ -1.84
SMC4-214ENST00000472991 KRTAP4-3Q9BYR4 195 aa3.51□□□□□ -1.85
SMC4-214ENST00000472991 C10orf95Q9H7T3 257 aa3.51□□□□□ -1.85
SMC4-214ENST00000472991 LCE3EQ5T5B0 92 aa3.5□□□□□ -1.85
SMC4-214ENST00000472991 NDUFAF8A1L188 74 aa3.48□□□□□ -1.85
SMC4-214ENST00000472991 K7ERS5 55 aa3.48□□□□□ -1.85
SMC4-214ENST00000472991 MDN1Q9NU22 5596 aa3.47□□□□□ -1.85
SMC4-214ENST00000472991 NEBP20929 6669 aa3.47□□□□□ -1.85
SMC4-214ENST00000472991 TNP1P09430 55 aa3.46□□□□□ -1.86
SMC4-214ENST00000472991 SPRR2EP22531 72 aa3.44□□□□□ -1.86
SMC4-214ENST00000472991 SPRR2BP35325 72 aa3.44□□□□□ -1.86
SMC4-214ENST00000472991 SPRR2AP35326 72 aa3.44□□□□□ -1.86
SMC4-214ENST00000472991 LCE3AQ5TA76 89 aa3.43□□□□□ -1.86
SMC4-214ENST00000472991 CDC42SE1Q9NRR8 79 aa3.42□□□□□ -1.86
SMC4-214ENST00000472991 KRTAP19-7Q3SYF9 63 aa3.4□□□□□ -1.87
SMC4-214ENST00000472991 KRTAP19-5Q3LI72 72 aa3.37□□□□□ -1.87
SMC4-214ENST00000472991 MT1EP04732 61 aa3.36□□□□□ -1.87
SMC4-214ENST00000472991 KRTAP25-1Q3LHN0 102 aa3.35□□□□□ -1.87
SMC4-214ENST00000472991 PRAC1Q96KF2 57 aa3.34□□□□□ -1.87
SMC4-214ENST00000472991 SPRR2DP22532 72 aa3.32□□□□□ -1.88
SMC4-214ENST00000472991 KRTAP20-1Q3LI63 56 aa3.31□□□□□ -1.88
SMC4-214ENST00000472991 ROMO1P60602 79 aa3.3□□□□□ -1.88
SMC4-214ENST00000472991 KRTAP19-3Q7Z4W3 81 aa3.29□□□□□ -1.88
SMC4-214ENST00000472991 KRTAP5-2Q701N4 177 aa3.28□□□□□ -1.88
SMC4-214ENST00000472991 KRTAP2-3P0C7H8 128 aa3.26□□□□□ -1.89
SMC4-214ENST00000472991 KRTAP12-3P60328 96 aa3.26□□□□□ -1.89
SMC4-214ENST00000472991 BRK1Q8WUW1 75 aa3.26□□□□□ -1.89
SMC4-214ENST00000472991 KRTAP2-4Q9BYR9 128 aa3.26□□□□□ -1.89
SMC4-214ENST00000472991 MT1LQ93083 61 aa3.24□□□□□ -1.89
SMC4-214ENST00000472991 MT1GP13640 62 aa3.22□□□□□ -1.89
SMC4-214ENST00000472991 PP632Q6XCG6 107 aa3.2□□□□□ -1.9
SMC4-214ENST00000472991 KRTAP5-5Q701N2 237 aaPredicted RBP3.2□□□□□ -1.9
SMC4-214ENST00000472991 MT1MQ8N339 61 aa3.19□□□□□ -1.9
SMC4-214ENST00000472991 KRTAP2-1Q9BYU5 128 aa3.17□□□□□ -1.9
SMC4-214ENST00000472991 DSTQ03001 7570 aaKnown RBP3.13□□□□□ -1.91
SMC4-214ENST00000472991 GPR98Q8WXG9 6306 aa3.07□□□□□ -1.92
SMC4-214ENST00000472991 PMAIP1Q13794 54 aa3.06□□□□□ -1.92
SMC4-214ENST00000472991 LCE1CQ5T751 118 aa3.01□□□□□ -1.93
SMC4-214ENST00000472991 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
SMC4-214ENST00000472991 PRO0628Q9UI54 55 aa2.99□□□□□ -1.93
SMC4-214ENST00000472991 MT4P47944 62 aa2.89□□□□□ -1.95
SMC4-214ENST00000472991 HMCN1Q96RW7 5635 aa2.84□□□□□ -1.95
SMC4-214ENST00000472991 KTN1-AS1Q86SY8 53 aa2.83□□□□□ -1.96
SMC4-214ENST00000472991 SYNE1Q8NF91 8797 aaKnown RBP2.79□□□□□ -1.96
SMC4-214ENST00000472991 MT1AP04731 61 aa2.76□□□□□ -1.97
SMC4-214ENST00000472991 KRTAP12-4P60329 112 aa2.76□□□□□ -1.97
SMC4-214ENST00000472991 LCE3DQ9BYE3 92 aa2.76□□□□□ -1.97
SMC4-214ENST00000472991 KRTAP20-2Q3LI61 65 aa2.75□□□□□ -1.97
SMC4-214ENST00000472991 KRTAP6-1Q3LI64 71 aa2.75□□□□□ -1.97
SMC4-214ENST00000472991 SPRR5A0A1B0GTR4 108 aa2.74□□□□□ -1.97
SMC4-214ENST00000472991 AHNAK2Q8IVF2 5795 aa2.71□□□□□ -1.98
SMC4-214ENST00000472991 KRTAP5-8O75690 187 aa2.69□□□□□ -1.98
SMC4-214ENST00000472991 KRTAP5-10Q6L8G5 202 aa2.58□□□□□ -2
SMC4-214ENST00000472991 KRTAP6-2Q3LI66 62 aa2.57□□□□□ -2
SMC4-214ENST00000472991 MUC19Q7Z5P9 8384 aa2.54□□□□□ -2
SMC4-214ENST00000472991 KRTAP5-7Q6L8G8 165 aa2.53□□□□□ -2
SMC4-214ENST00000472991 LUZP6Q538Z0 58 aa2.41□□□□□ -2.02
SMC4-214ENST00000472991 AHNAKQ09666 5890 aaKnown RBP2.37□□□□□ -2.03
SMC4-214ENST00000472991 MUC5BQ9HC84 5762 aaPredicted RBP2.26□□□□□ -2.05
SMC4-214ENST00000472991 MUC5ACP98088 5654 aa2.25□□□□□ -2.05
SMC4-214ENST00000472991 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
SMC4-214ENST00000472991 INE1O15225 51 aa1.72□□□□□ -2.13
SMC4-214ENST00000472991 PRM1P04553 51 aa1.71□□□□□ -2.14
SMC4-214ENST00000472991 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
SMC4-214ENST00000472991 KRTAP21-1Q3LI58 79 aa1.16□□□□□ -2.22
SMC4-214ENST00000472991 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 13.5 ms