RNA–Protein interactions for RNA: ENST00000472947.5

NMD3-206, Transcript of NMD3 ribosome export adaptor, humanhuman

TSL 1 (best) BASIC

Gene NMD3, Length 2,378 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3-206ENST00000472947 FCGBPQ9Y6R7 5405 aaPredicted RBP4.01□□□□□ -1.77
NMD3-206ENST00000472947 KRTAP19-7Q3SYF9 63 aa4.01□□□□□ -1.77
NMD3-206ENST00000472947 INE1O15225 51 aa4□□□□□ -1.77
NMD3-206ENST00000472947 KRTAP4-12Q9BQ66 201 aa3.95□□□□□ -1.78
NMD3-206ENST00000472947 KRTAP9-4Q9BYQ2 154 aa3.94□□□□□ -1.78
NMD3-206ENST00000472947 MUC12Q9UKN1 5478 aa3.93□□□□□ -1.78
NMD3-206ENST00000472947 KRTAP9-9Q9BYP9 154 aa3.92□□□□□ -1.78
NMD3-206ENST00000472947 LCE3CQ5T5A8 94 aa3.92□□□□□ -1.78
NMD3-206ENST00000472947 MT1EP04732 61 aa3.89□□□□□ -1.79
NMD3-206ENST00000472947 MACF1Q9UPN3 7388 aaKnown RBP3.86□□□□□ -1.79
NMD3-206ENST00000472947 MT1LQ93083 61 aa3.85□□□□□ -1.79
NMD3-206ENST00000472947 KRTAP5-3Q6L8H2 238 aa3.85□□□□□ -1.79
NMD3-206ENST00000472947 KRTAP9-6A8MVA2 160 aa3.84□□□□□ -1.79
NMD3-206ENST00000472947 LCE1DQ5T752 114 aa3.83□□□□□ -1.8
NMD3-206ENST00000472947 KRTAP4-9Q9BYQ8 210 aa3.8□□□□□ -1.8
NMD3-206ENST00000472947 KRTAP4-3Q9BYR4 195 aa3.78□□□□□ -1.8
NMD3-206ENST00000472947 SYNE2Q8WXH0 6885 aaKnown RBP3.76□□□□□ -1.81
NMD3-206ENST00000472947 KRTAP4-2Q9BYR5 136 aa3.75□□□□□ -1.81
NMD3-206ENST00000472947 DSTQ03001 7570 aaKnown RBP3.74□□□□□ -1.81
NMD3-206ENST00000472947 SPRR2FQ96RM1 72 aa3.73□□□□□ -1.81
NMD3-206ENST00000472947 CRCT1Q9UGL9 99 aa3.69□□□□□ -1.82
NMD3-206ENST00000472947 KRTAP19-3Q7Z4W3 81 aa3.68□□□□□ -1.82
NMD3-206ENST00000472947 LCE5AQ5TCM9 118 aa3.66□□□□□ -1.82
NMD3-206ENST00000472947 MT1MQ8N339 61 aa3.66□□□□□ -1.82
NMD3-206ENST00000472947 MDN1Q9NU22 5596 aa3.65□□□□□ -1.83
NMD3-206ENST00000472947 MT1GP13640 62 aa3.64□□□□□ -1.83
NMD3-206ENST00000472947 KRTAP2-3P0C7H8 128 aa3.51□□□□□ -1.85
NMD3-206ENST00000472947 KRTAP4-11Q9BYQ6 195 aa3.51□□□□□ -1.85
NMD3-206ENST00000472947 KRTAP2-4Q9BYR9 128 aa3.51□□□□□ -1.85
NMD3-206ENST00000472947 KRTAP2-1Q9BYU5 128 aa3.51□□□□□ -1.85
NMD3-206ENST00000472947 LCE1AQ5T7P2 110 aa3.49□□□□□ -1.85
NMD3-206ENST00000472947 KRTAP5-9P26371 169 aa3.48□□□□□ -1.85
NMD3-206ENST00000472947 SPRR2EP22531 72 aa3.45□□□□□ -1.86
NMD3-206ENST00000472947 SPRR2BP35325 72 aa3.45□□□□□ -1.86
NMD3-206ENST00000472947 SPRR2AP35326 72 aa3.45□□□□□ -1.86
NMD3-206ENST00000472947 SYNE1Q8NF91 8797 aaKnown RBP3.37□□□□□ -1.87
NMD3-206ENST00000472947 KRTAP6-1Q3LI64 71 aa3.31□□□□□ -1.88
NMD3-206ENST00000472947 KRTAP6-3Q3LI67 103 aa3.3□□□□□ -1.88
NMD3-206ENST00000472947 SPRR2DP22532 72 aa3.3□□□□□ -1.88
NMD3-206ENST00000472947 KRTAP5-5Q701N2 237 aaPredicted RBP3.24□□□□□ -1.89
NMD3-206ENST00000472947 MT1AP04731 61 aa3.21□□□□□ -1.9
NMD3-206ENST00000472947 NEBP20929 6669 aa3.15□□□□□ -1.91
NMD3-206ENST00000472947 OBSCNQ5VST9 7968 aa3.12□□□□□ -1.91
NMD3-206ENST00000472947 KRTAP12-4P60329 112 aa3.09□□□□□ -1.91
NMD3-206ENST00000472947 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
NMD3-206ENST00000472947 KRTAP2-2Q9BYT5 123 aa3.04□□□□□ -1.92
NMD3-206ENST00000472947 MT3P25713 68 aa3.03□□□□□ -1.92
NMD3-206ENST00000472947 KRTAP6-2Q3LI66 62 aa3.01□□□□□ -1.93
NMD3-206ENST00000472947 LCE3DQ9BYE3 92 aa2.98□□□□□ -1.93
NMD3-206ENST00000472947 MT4P47944 62 aa2.96□□□□□ -1.94
NMD3-206ENST00000472947 KRTAP5-4Q6L8H1 288 aa2.95□□□□□ -1.94
NMD3-206ENST00000472947 LCE3EQ5T5B0 92 aa2.9□□□□□ -1.95
NMD3-206ENST00000472947 HMCN1Q96RW7 5635 aa2.89□□□□□ -1.95
NMD3-206ENST00000472947 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.84□□□□□ -1.95
NMD3-206ENST00000472947 KRTAP20-2Q3LI61 65 aa2.81□□□□□ -1.96
NMD3-206ENST00000472947 KRTAP20-1Q3LI63 56 aa2.76□□□□□ -1.97
NMD3-206ENST00000472947 PRM1P04553 51 aa2.71□□□□□ -1.98
NMD3-206ENST00000472947 KRTAP5-2Q701N4 177 aa2.71□□□□□ -1.98
NMD3-206ENST00000472947 LCE1EQ5T753 118 aa2.5□□□□□ -2.01
NMD3-206ENST00000472947 MUC5ACP98088 5654 aa2.48□□□□□ -2.01
NMD3-206ENST00000472947 LCE1BQ5T7P3 118 aa2.46□□□□□ -2.02
NMD3-206ENST00000472947 KRTAP5-1Q6L8H4 278 aa2.37□□□□□ -2.03
NMD3-206ENST00000472947 AHNAK2Q8IVF2 5795 aa2.36□□□□□ -2.03
NMD3-206ENST00000472947 KRTAP5-8O75690 187 aa2.3□□□□□ -2.04
NMD3-206ENST00000472947 KRTAP5-10Q6L8G5 202 aa2.3□□□□□ -2.04
NMD3-206ENST00000472947 KRTAP5-11Q6L8G4 156 aa2.29□□□□□ -2.04
NMD3-206ENST00000472947 GPR98Q8WXG9 6306 aa2.27□□□□□ -2.05
NMD3-206ENST00000472947 LCE1CQ5T751 118 aa2.27□□□□□ -2.05
NMD3-206ENST00000472947 KRTAP4-4Q9BYR3 166 aa2.2□□□□□ -2.06
NMD3-206ENST00000472947 KRTAP5-7Q6L8G8 165 aa2.15□□□□□ -2.07
NMD3-206ENST00000472947 MUC5BQ9HC84 5762 aaPredicted RBP2.13□□□□□ -2.07
NMD3-206ENST00000472947 KRTAP21-2Q3LI59 83 aa2.13□□□□□ -2.07
NMD3-206ENST00000472947 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.11
NMD3-206ENST00000472947 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
NMD3-206ENST00000472947 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
NMD3-206ENST00000472947 PHGR1C9JFL3 82 aa1.72□□□□□ -2.13
NMD3-206ENST00000472947 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 169.7 ms