RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 SYNE1Q8NF91 8797 aaKnown RBP4.47□□□□□ -1.69
SMURF1-203ENST00000472627 KRTAP12-3P60328 96 aa4.44□□□□□ -1.7
SMURF1-203ENST00000472627 A0A1B0GU33 70 aa4.42□□□□□ -1.7
SMURF1-203ENST00000472627 LOC105371267A0A1B0GV96 52 aa4.41□□□□□ -1.7
SMURF1-203ENST00000472627 H3BS24 57 aa4.41□□□□□ -1.7
SMURF1-203ENST00000472627 SMIM20Q8N5G0 67 aa4.4□□□□□ -1.71
SMURF1-203ENST00000472627 KRTAP5-8O75690 187 aa4.39□□□□□ -1.71
SMURF1-203ENST00000472627 SPANXA2-OT1Q8N9U9 137 aa4.39□□□□□ -1.71
SMURF1-203ENST00000472627 SMIM26A0A096LP01 95 aa4.35□□□□□ -1.71
SMURF1-203ENST00000472627 KRTAP5-2Q701N4 177 aa4.33□□□□□ -1.72
SMURF1-203ENST00000472627 KRTAP9-9Q9BYP9 154 aa4.33□□□□□ -1.72
SMURF1-203ENST00000472627 SNURFQ9Y675 71 aa4.31□□□□□ -1.72
SMURF1-203ENST00000472627 J3QR89 54 aa4.29□□□□□ -1.72
SMURF1-203ENST00000472627 COA5Q86WW8 74 aa4.27□□□□□ -1.73
SMURF1-203ENST00000472627 PCP4L1A6NKN8 68 aa4.24□□□□□ -1.73
SMURF1-203ENST00000472627 KRTAP19-4Q3LI73 84 aa4.23□□□□□ -1.73
SMURF1-203ENST00000472627 A8MU10 97 aa4.2□□□□□ -1.74
SMURF1-203ENST00000472627 SERP2Q8N6R1 65 aa4.19□□□□□ -1.74
SMURF1-203ENST00000472627 OBSCNQ5VST9 7968 aa4.17□□□□□ -1.74
SMURF1-203ENST00000472627 MT1AP04731 61 aa4.16□□□□□ -1.74
SMURF1-203ENST00000472627 A0A1B0GU69 56 aa4.13□□□□□ -1.75
SMURF1-203ENST00000472627 PCP4P48539 62 aa4.13□□□□□ -1.75
SMURF1-203ENST00000472627 KRTAP6-1Q3LI64 71 aa4.13□□□□□ -1.75
SMURF1-203ENST00000472627 KRTAP25-1Q3LHN0 102 aa4.08□□□□□ -1.76
SMURF1-203ENST00000472627 KRTAP6-2Q3LI66 62 aa4.08□□□□□ -1.76
SMURF1-203ENST00000472627 KRTAP9-4Q9BYQ2 154 aa4.07□□□□□ -1.76
SMURF1-203ENST00000472627 LCE3CQ5T5A8 94 aa4.02□□□□□ -1.77
SMURF1-203ENST00000472627 A0A1B0GV90 55 aa3.99□□□□□ -1.77
SMURF1-203ENST00000472627 KRTAP15-1Q3LI76 137 aa3.97□□□□□ -1.77
SMURF1-203ENST00000472627 KRTAP5-1Q6L8H4 278 aa3.97□□□□□ -1.77
SMURF1-203ENST00000472627 A0A0A0MQY5 61 aa3.96□□□□□ -1.78
SMURF1-203ENST00000472627 KRTAP4-12Q9BQ66 201 aa3.95□□□□□ -1.78
SMURF1-203ENST00000472627 PRR15LQ9BU68 103 aa3.93□□□□□ -1.78
SMURF1-203ENST00000472627 MT3P25713 68 aa3.87□□□□□ -1.79
SMURF1-203ENST00000472627 H7BZZ5 65 aa3.84□□□□□ -1.79
SMURF1-203ENST00000472627 K7ERU9 68 aa3.82□□□□□ -1.8
SMURF1-203ENST00000472627 KRTAP23-1A1A580 65 aa3.8□□□□□ -1.8
SMURF1-203ENST00000472627 KRTAP9-6A8MVA2 160 aa3.71□□□□□ -1.82
SMURF1-203ENST00000472627 K7ERS5 55 aa3.71□□□□□ -1.82
SMURF1-203ENST00000472627 UQCR11O14957 56 aa3.71□□□□□ -1.82
SMURF1-203ENST00000472627 COX7CP15954 63 aa3.7□□□□□ -1.82
SMURF1-203ENST00000472627 LCE1EQ5T753 118 aa3.67□□□□□ -1.82
SMURF1-203ENST00000472627 LINC01558Q9Y6Z2 57 aa3.61□□□□□ -1.83
SMURF1-203ENST00000472627 RPS28P62857 69 aaKnown RBP3.55□□□□□ -1.84
SMURF1-203ENST00000472627 MIR22HGQ0VDD5 57 aa3.55□□□□□ -1.84
SMURF1-203ENST00000472627 KRTAP4-2Q9BYR5 136 aa3.53□□□□□ -1.84
SMURF1-203ENST00000472627 LCE1BQ5T7P3 118 aa3.5□□□□□ -1.85
SMURF1-203ENST00000472627 ATP5EP56381 51 aaPredicted RBP3.45□□□□□ -1.86
SMURF1-203ENST00000472627 LCE1CQ5T751 118 aa3.39□□□□□ -1.87
SMURF1-203ENST00000472627 CDC42SE1Q9NRR8 79 aa3.38□□□□□ -1.87
SMURF1-203ENST00000472627 ANAPC13Q9BS18 74 aa3.3□□□□□ -1.88
SMURF1-203ENST00000472627 Q1T7F1 81 aa3.25□□□□□ -1.89
SMURF1-203ENST00000472627 PRAC1Q96KF2 57 aa3.25□□□□□ -1.89
SMURF1-203ENST00000472627 ROMO1P60602 79 aa3.24□□□□□ -1.89
SMURF1-203ENST00000472627 V9GYY9 64 aa3.24□□□□□ -1.89
SMURF1-203ENST00000472627 LCE1FQ5T754 118 aa3.2□□□□□ -1.9
SMURF1-203ENST00000472627 KRTAP5-11Q6L8G4 156 aa3.19□□□□□ -1.9
SMURF1-203ENST00000472627 CCDC179H3BU77 68 aa3.17□□□□□ -1.9
SMURF1-203ENST00000472627 PHGR1C9JFL3 82 aa3.15□□□□□ -1.91
SMURF1-203ENST00000472627 PSPHP1O15172 72 aa3.14□□□□□ -1.91
SMURF1-203ENST00000472627 TMEM258P61165 79 aa3.11□□□□□ -1.91
SMURF1-203ENST00000472627 A6NED7 52 aa3.05□□□□□ -1.92
SMURF1-203ENST00000472627 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.01□□□□□ -1.93
SMURF1-203ENST00000472627 PRO0628Q9UI54 55 aa2.86□□□□□ -1.95
SMURF1-203ENST00000472627 LCE3DQ9BYE3 92 aa2.82□□□□□ -1.96
SMURF1-203ENST00000472627 NDUFAF8A1L188 74 aa2.8□□□□□ -1.96
SMURF1-203ENST00000472627 PMAIP1Q13794 54 aa2.77□□□□□ -1.97
SMURF1-203ENST00000472627 KRTAP21-2Q3LI59 83 aa2.71□□□□□ -1.98
SMURF1-203ENST00000472627 LUZP6Q538Z0 58 aa2.67□□□□□ -1.98
SMURF1-203ENST00000472627 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
SMURF1-203ENST00000472627 LCE3EQ5T5B0 92 aa2.56□□□□□ -2
SMURF1-203ENST00000472627 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
SMURF1-203ENST00000472627 KTN1-AS1Q86SY8 53 aa2.49□□□□□ -2.01
SMURF1-203ENST00000472627 KRTAP21-1Q3LI58 79 aa2.43□□□□□ -2.02
SMURF1-203ENST00000472627 BRK1Q8WUW1 75 aa2.31□□□□□ -2.04
SMURF1-203ENST00000472627 INE1O15225 51 aa1.83□□□□□ -2.12
SMURF1-203ENST00000472627 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
SMURF1-203ENST00000472627 PRM1P04553 51 aa1.6□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 64.6 ms