RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 RHPN1-AS1Q9BWJ2 59 aa0.03□□□□□ -2.4
PTCD3-209ENST00000472044 DOT1LQ8TEK3 1739 aa0.03□□□□□ -2.4
PTCD3-209ENST00000472044 ANKRD36CQ5JPF3 1778 aa0.03□□□□□ -2.4
PTCD3-209ENST00000472044 MUC12Q9UKN1 5478 aa0.03□□□□□ -2.4
PTCD3-209ENST00000472044 SSPOA2VEC9 5147 aa0.03□□□□□ -2.41
PTCD3-209ENST00000472044 BIRC6Q9NR09 4857 aa0.03□□□□□ -2.41
PTCD3-209ENST00000472044 LOC730098B7Z3J9 87 aa0.02□□□□□ -2.41
PTCD3-209ENST00000472044 MT2AP02795 61 aa0.02□□□□□ -2.41
PTCD3-209ENST00000472044 MT1FP04733 61 aa0.02□□□□□ -2.41
PTCD3-209ENST00000472044 MT1GP13640 62 aa0.02□□□□□ -2.41
PTCD3-209ENST00000472044 MT1XP80297 61 aa0.02□□□□□ -2.41
PTCD3-209ENST00000472044 PRCDQ00LT1 54 aa0.02□□□□□ -2.41
PTCD3-209ENST00000472044 MT1MQ8N339 61 aa0.02□□□□□ -2.41
PTCD3-209ENST00000472044 TMEM167AQ8TBQ9 72 aa0.02□□□□□ -2.41
PTCD3-209ENST00000472044 COX14Q96I36 57 aa0.02□□□□□ -2.41
PTCD3-209ENST00000472044 SPRR2GQ9BYE4 73 aa0.02□□□□□ -2.41
PTCD3-209ENST00000472044 APLNQ9ULZ1 77 aa0.02□□□□□ -2.41
PTCD3-209ENST00000472044 HILPDAQ9Y5L2 63 aa0.02□□□□□ -2.41
PTCD3-209ENST00000472044 HMCN2Q8NDA2 5059 aa0.02□□□□□ -2.41
PTCD3-209ENST00000472044 MACF1Q9UPN3 7388 aaKnown RBP0.01□□□□□ -2.41
PTCD3-209ENST00000472044 RYR3Q15413 4870 aa0.01□□□□□ -2.41
PTCD3-209ENST00000472044 SMR3BP02814 79 aaPredicted RBP0.01□□□□□ -2.41
PTCD3-209ENST00000472044 PRM1P04553 51 aa0.01□□□□□ -2.41
PTCD3-209ENST00000472044 MT1BP07438 61 aa0.01□□□□□ -2.41
PTCD3-209ENST00000472044 SPART-AS1P0CW21 52 aa0.01□□□□□ -2.41
PTCD3-209ENST00000472044 DEFB1P60022 68 aa0.01□□□□□ -2.41
PTCD3-209ENST00000472044 KRTAP19-8Q3LI54 63 aa0.01□□□□□ -2.41
PTCD3-209ENST00000472044 LINC01556Q5JQF7 62 aa0.01□□□□□ -2.41
PTCD3-209ENST00000472044 LELP1Q5T871 98 aa0.01□□□□□ -2.41
PTCD3-209ENST00000472044 DEFB106AQ8N104 65 aa0.01□□□□□ -2.41
PTCD3-209ENST00000472044 LEAP2Q969E1 77 aa0.01□□□□□ -2.41
PTCD3-209ENST00000472044 ARHGAP5-AS1Q96IT6 56 aa0.01□□□□□ -2.41
PTCD3-209ENST00000472044 KAAG1Q9UBP8 84 aa0.01□□□□□ -2.41
PTCD3-209ENST00000472044 KMT2CQ8NEZ4 4911 aaKnown RBP0.01□□□□□ -2.41
PTCD3-209ENST00000472044 UBR4Q5T4S7 5183 aa0□□□□□ -2.41
PTCD3-209ENST00000472044 RPL39P62891 51 aaKnown RBP0□□□□□ -2.41
PTCD3-209ENST00000472044 DEFB133Q30KQ1 61 aa0□□□□□ -2.41
PTCD3-209ENST00000472044 DEFB110Q30KQ9 67 aa0□□□□□ -2.41
PTCD3-209ENST00000472044 KRTAP6-1Q3LI64 71 aa0□□□□□ -2.41
PTCD3-209ENST00000472044 KRTAP6-2Q3LI66 62 aa0□□□□□ -2.41
PTCD3-209ENST00000472044 WFDC10BQ8IUB3 73 aa0□□□□□ -2.41
PTCD3-209ENST00000472044 MUC2Q02817 5179 aa-0□□□□□ -2.41
PTCD3-209ENST00000472044 EPPK1P58107 5090 aaKnown RBP-0□□□□□ -2.41
PTCD3-209ENST00000472044 USH2AO75445 5202 aa-0□□□□□ -2.41
PTCD3-209ENST00000472044 RNF213Q63HN8 5207 aa-0.01□□□□□ -2.41
PTCD3-209ENST00000472044 RYR1P21817 5038 aa-0.01□□□□□ -2.41
PTCD3-209ENST00000472044 KIAA1109Q2LD37 5005 aa-0.01□□□□□ -2.41
PTCD3-209ENST00000472044 MT4P47944 62 aa-0.01□□□□□ -2.41
PTCD3-209ENST00000472044 TFF3Q07654 80 aa-0.01□□□□□ -2.41
PTCD3-209ENST00000472044 RPL39LQ96EH5 51 aaKnown RBP-0.01□□□□□ -2.41
PTCD3-209ENST00000472044 TOMM7Q9P0U1 55 aa-0.01□□□□□ -2.41
PTCD3-209ENST00000472044 DSTQ03001 7570 aaKnown RBP-0.01□□□□□ -2.41
PTCD3-209ENST00000472044 PCLOQ9Y6V0 5065 aa-0.02□□□□□ -2.41
PTCD3-209ENST00000472044 A0A096LPF7 62 aa-0.02□□□□□ -2.41
PTCD3-209ENST00000472044 KRTAP19-2Q3LHN2 52 aa-0.02□□□□□ -2.41
PTCD3-209ENST00000472044 KRTAP20-1Q3LI63 56 aa-0.02□□□□□ -2.41
PTCD3-209ENST00000472044 KRTAP19-7Q3SYF9 63 aa-0.02□□□□□ -2.41
PTCD3-209ENST00000472044 ABCA13Q86UQ4 5058 aa-0.02□□□□□ -2.41
PTCD3-209ENST00000472044 HYDINQ4G0P3 5121 aa-0.02□□□□□ -2.41
PTCD3-209ENST00000472044 RYR2Q92736 4967 aa-0.03□□□□□ -2.41
PTCD3-209ENST00000472044 GPR98Q8WXG9 6306 aa-0.03□□□□□ -2.41
PTCD3-209ENST00000472044 KRTAP19-6Q3LI70 58 aa-0.03□□□□□ -2.41
PTCD3-209ENST00000472044 DEFB104AQ8WTQ1 72 aa-0.03□□□□□ -2.41
PTCD3-209ENST00000472044 A0A096LNI7 61 aa-0.04□□□□□ -2.42
PTCD3-209ENST00000472044 DEFB4AO15263 64 aa-0.04□□□□□ -2.42
PTCD3-209ENST00000472044 KRTAP20-2Q3LI61 65 aa-0.04□□□□□ -2.42
PTCD3-209ENST00000472044 RPL39P5Q59GN2 51 aa-0.04□□□□□ -2.42
PTCD3-209ENST00000472044 DEFB108AA8MXU0 73 aa-0.05□□□□□ -2.42
PTCD3-209ENST00000472044 HTN1P15515 57 aa-0.05□□□□□ -2.42
PTCD3-209ENST00000472044 DEFB108BQ8NET1 73 aa-0.05□□□□□ -2.42
PTCD3-209ENST00000472044 TTTY10Q9BZA0 68 aa-0.06□□□□□ -2.42
PTCD3-209ENST00000472044 H3BSH0 61 aa-0.09□□□□□ -2.42
PTCD3-209ENST00000472044 APELAP0DMC3 54 aa-0.09□□□□□ -2.42
PTCD3-209ENST00000472044 STATHP02808 62 aa-0.1□□□□□ -2.43
PTCD3-209ENST00000472044 HTN3P15516 51 aa-0.1□□□□□ -2.43
PTCD3-209ENST00000472044 FSIP2Q5CZC0 6907 aa-0.11□□□□□ -2.43
PTCD3-209ENST00000472044 NEBP20929 6669 aa-0.12□□□□□ -2.43
PTCD3-209ENST00000472044 SYNE2Q8WXH0 6885 aaKnown RBP-0.14□□□□□ -2.43
Retrieved 78 of 20,778 RNA–protein pairs in 88.1 ms