RNA–Protein interactions for RNA: ENST00000471910.1

CDHR3-208, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 392 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-208ENST00000471910 FLGP20930 4061 aaPredicted RBP1.13□□□□□ -2.23
CDHR3-208ENST00000471910 C9orf92A6NGG3 77 aa1.12□□□□□ -2.23
CDHR3-208ENST00000471910 PKHD1P08F94 4074 aa1.11□□□□□ -2.23
CDHR3-208ENST00000471910 TNP1P09430 55 aa1.11□□□□□ -2.23
CDHR3-208ENST00000471910 SYNE2Q8WXH0 6885 aaKnown RBP1.11□□□□□ -2.23
CDHR3-208ENST00000471910 MACF1Q9UPN3 7388 aaKnown RBP1.1□□□□□ -2.23
CDHR3-208ENST00000471910 NEBP20929 6669 aa1.1□□□□□ -2.23
CDHR3-208ENST00000471910 HERC1Q15751 4861 aa1.1□□□□□ -2.23
CDHR3-208ENST00000471910 TNXBP22105 4242 aa1.1□□□□□ -2.23
CDHR3-208ENST00000471910 HSPG2P98160 4391 aa1.09□□□□□ -2.23
CDHR3-208ENST00000471910 PLECQ15149 4684 aaKnown RBP1.09□□□□□ -2.24
CDHR3-208ENST00000471910 FAT2Q9NYQ8 4349 aa1.08□□□□□ -2.24
CDHR3-208ENST00000471910 HERC2O95714 4834 aa1.08□□□□□ -2.24
CDHR3-208ENST00000471910 DNAH5Q8TE73 4624 aa1.08□□□□□ -2.24
CDHR3-208ENST00000471910 LRP1Q07954 4544 aaKnown RBP1.07□□□□□ -2.24
CDHR3-208ENST00000471910 APOBP04114 4563 aaKnown RBP1.06□□□□□ -2.24
CDHR3-208ENST00000471910 FAT4Q6V0I7 4981 aa1.05□□□□□ -2.24
CDHR3-208ENST00000471910 DYNC1H1Q14204 4646 aaKnown RBP1.05□□□□□ -2.24
CDHR3-208ENST00000471910 MYCBP2O75592 4640 aa1.05□□□□□ -2.24
CDHR3-208ENST00000471910 KRTAP20-1Q3LI63 56 aa1.05□□□□□ -2.24
CDHR3-208ENST00000471910 FAT3Q8TDW7 4589 aa1.03□□□□□ -2.24
CDHR3-208ENST00000471910 LRP1BQ9NZR2 4599 aa1.03□□□□□ -2.24
CDHR3-208ENST00000471910 AHNAK2Q8IVF2 5795 aa1.02□□□□□ -2.25
CDHR3-208ENST00000471910 SSPOA2VEC9 5147 aa1.01□□□□□ -2.25
CDHR3-208ENST00000471910 STARD9Q9P2P6 4700 aa1.01□□□□□ -2.25
CDHR3-208ENST00000471910 KRTAP8-1Q8IUC2 63 aa1□□□□□ -2.25
CDHR3-208ENST00000471910 FAT1Q14517 4588 aa0.99□□□□□ -2.25
CDHR3-208ENST00000471910 AHNAKQ09666 5890 aaKnown RBP0.96□□□□□ -2.26
CDHR3-208ENST00000471910 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
CDHR3-208ENST00000471910 KRTAP2-3P0C7H8 128 aa0.94□□□□□ -2.26
CDHR3-208ENST00000471910 KRTAP5-10Q6L8G5 202 aa0.94□□□□□ -2.26
CDHR3-208ENST00000471910 KRTAP2-4Q9BYR9 128 aa0.94□□□□□ -2.26
CDHR3-208ENST00000471910 KRTAP2-1Q9BYU5 128 aa0.94□□□□□ -2.26
CDHR3-208ENST00000471910 LPAP08519 4548 aa0.93□□□□□ -2.26
CDHR3-208ENST00000471910 SPRR2GQ9BYE4 73 aa0.92□□□□□ -2.26
CDHR3-208ENST00000471910 MUC5BQ9HC84 5762 aaPredicted RBP0.92□□□□□ -2.26
CDHR3-208ENST00000471910 M0R2T5 61 aa0.91□□□□□ -2.26
CDHR3-208ENST00000471910 RNF213Q63HN8 5207 aa0.91□□□□□ -2.26
CDHR3-208ENST00000471910 MUC17Q685J3 4493 aa0.91□□□□□ -2.26
CDHR3-208ENST00000471910 HMCN2Q8NDA2 5059 aa0.9□□□□□ -2.27
CDHR3-208ENST00000471910 DSTQ03001 7570 aaKnown RBP0.89□□□□□ -2.27
CDHR3-208ENST00000471910 KMT2DO14686 5537 aa0.88□□□□□ -2.27
CDHR3-208ENST00000471910 LRP2P98164 4655 aa0.87□□□□□ -2.27
CDHR3-208ENST00000471910 SMR3BP02814 79 aaPredicted RBP0.87□□□□□ -2.27
CDHR3-208ENST00000471910 KRTAP19-2Q3LHN2 52 aa0.87□□□□□ -2.27
CDHR3-208ENST00000471910 MT1HL1P0DM35 61 aa0.85□□□□□ -2.27
CDHR3-208ENST00000471910 KRTAP19-8Q3LI54 63 aa0.85□□□□□ -2.27
CDHR3-208ENST00000471910 KRTAP19-5Q3LI72 72 aa0.83□□□□□ -2.28
CDHR3-208ENST00000471910 MUC5ACP98088 5654 aa0.8□□□□□ -2.28
CDHR3-208ENST00000471910 MT1AP04731 61 aa0.8□□□□□ -2.28
CDHR3-208ENST00000471910 MT1EP04732 61 aa0.79□□□□□ -2.28
CDHR3-208ENST00000471910 MT1XP80297 61 aa0.79□□□□□ -2.28
CDHR3-208ENST00000471910 MT1LQ93083 61 aa0.77□□□□□ -2.29
CDHR3-208ENST00000471910 MDN1Q9NU22 5596 aa0.76□□□□□ -2.29
CDHR3-208ENST00000471910 MT1BP07438 61 aa0.75□□□□□ -2.29
CDHR3-208ENST00000471910 USH2AO75445 5202 aa0.75□□□□□ -2.29
CDHR3-208ENST00000471910 MUC12Q9UKN1 5478 aa0.75□□□□□ -2.29
CDHR3-208ENST00000471910 MT2AP02795 61 aa0.72□□□□□ -2.29
CDHR3-208ENST00000471910 PRM1P04553 51 aa0.71□□□□□ -2.3
CDHR3-208ENST00000471910 SPRR2AP35326 72 aa0.71□□□□□ -2.3
CDHR3-208ENST00000471910 KRTAP19-7Q3SYF9 63 aa0.71□□□□□ -2.3
CDHR3-208ENST00000471910 MT1FP04733 61 aa0.7□□□□□ -2.3
CDHR3-208ENST00000471910 MT1HP80294 61 aa0.7□□□□□ -2.3
CDHR3-208ENST00000471910 SPRR2FQ96RM1 72 aa0.7□□□□□ -2.3
CDHR3-208ENST00000471910 SPRR2BP35325 72 aa0.69□□□□□ -2.3
CDHR3-208ENST00000471910 KRTAP19-3Q7Z4W3 81 aa0.69□□□□□ -2.3
CDHR3-208ENST00000471910 MT1GP13640 62 aa0.66□□□□□ -2.3
CDHR3-208ENST00000471910 SPRR2EP22531 72 aa0.65□□□□□ -2.31
CDHR3-208ENST00000471910 SPRR2DP22532 72 aa0.65□□□□□ -2.31
CDHR3-208ENST00000471910 MT1MQ8N339 61 aa0.65□□□□□ -2.31
CDHR3-208ENST00000471910 KRTAP6-2Q3LI66 62 aa0.64□□□□□ -2.31
CDHR3-208ENST00000471910 SYNE1Q8NF91 8797 aaKnown RBP0.61□□□□□ -2.31
CDHR3-208ENST00000471910 KRTAP6-1Q3LI64 71 aa0.57□□□□□ -2.32
CDHR3-208ENST00000471910 KRTAP19-6Q3LI70 58 aa0.55□□□□□ -2.32
CDHR3-208ENST00000471910 KRTAP21-1Q3LI58 79 aa0.54□□□□□ -2.32
CDHR3-208ENST00000471910 PHGR1C9JFL3 82 aa0.52□□□□□ -2.33
CDHR3-208ENST00000471910 MT4P47944 62 aa0.45□□□□□ -2.34
CDHR3-208ENST00000471910 KRTAP20-2Q3LI61 65 aa0.35□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 64.8 ms