RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 SPINT4Q6UDR6 99 aa6.59□□□□□ -1.35
CCDC78-208ENST00000471861 KRTAP12-1P59990 96 aa6.56□□□□□ -1.36
CCDC78-208ENST00000471861 SEC61GP60059 68 aa6.54□□□□□ -1.36
CCDC78-208ENST00000471861 SPATA8Q6RVD6 105 aa6.54□□□□□ -1.36
CCDC78-208ENST00000471861 SERP1Q9Y6X1 66 aa6.53□□□□□ -1.36
CCDC78-208ENST00000471861 CCDC179H3BU77 68 aa6.51□□□□□ -1.37
CCDC78-208ENST00000471861 KRTAP12-4P60329 112 aa6.48□□□□□ -1.37
CCDC78-208ENST00000471861 SYNE1Q8NF91 8797 aaKnown RBP6.46□□□□□ -1.37
CCDC78-208ENST00000471861 A0A1B0GU33 70 aa6.42□□□□□ -1.38
CCDC78-208ENST00000471861 ATP5EP56381 51 aaPredicted RBP6.4□□□□□ -1.38
CCDC78-208ENST00000471861 A0A1B0GU69 56 aa6.38□□□□□ -1.39
CCDC78-208ENST00000471861 LOC100996750A0A140TA64 210 aa6.34□□□□□ -1.39
CCDC78-208ENST00000471861 TNP1P09430 55 aa6.34□□□□□ -1.39
CCDC78-208ENST00000471861 KRTAP4-11Q9BYQ6 195 aa6.34□□□□□ -1.39
CCDC78-208ENST00000471861 KRTAP12-3P60328 96 aa6.32□□□□□ -1.4
CCDC78-208ENST00000471861 TMEM258P61165 79 aa6.28□□□□□ -1.4
CCDC78-208ENST00000471861 MUC5ACP98088 5654 aa6.25□□□□□ -1.41
CCDC78-208ENST00000471861 SMIM26A0A096LP01 95 aa6.25□□□□□ -1.41
CCDC78-208ENST00000471861 AHNAKQ09666 5890 aaKnown RBP6.24□□□□□ -1.41
CCDC78-208ENST00000471861 MUC5BQ9HC84 5762 aaPredicted RBP6.22□□□□□ -1.41
CCDC78-208ENST00000471861 PRR15LQ9BU68 103 aa6.22□□□□□ -1.41
CCDC78-208ENST00000471861 LINC01558Q9Y6Z2 57 aa6.21□□□□□ -1.42
CCDC78-208ENST00000471861 A8MU10 97 aa6.2□□□□□ -1.42
CCDC78-208ENST00000471861 KRTAP5-8O75690 187 aa6.17□□□□□ -1.42
CCDC78-208ENST00000471861 KRTAP5-2Q701N4 177 aa6.17□□□□□ -1.42
CCDC78-208ENST00000471861 UQCR11O14957 56 aa6.02□□□□□ -1.45
CCDC78-208ENST00000471861 KRTAP6-1Q3LI64 71 aa5.95□□□□□ -1.46
CCDC78-208ENST00000471861 OBSCNQ5VST9 7968 aa5.94□□□□□ -1.46
CCDC78-208ENST00000471861 MT1AP04731 61 aa5.91□□□□□ -1.46
CCDC78-208ENST00000471861 V9GYY9 64 aa5.91□□□□□ -1.46
CCDC78-208ENST00000471861 MIR22HGQ0VDD5 57 aa5.9□□□□□ -1.46
CCDC78-208ENST00000471861 Q1T7F1 81 aa5.88□□□□□ -1.47
CCDC78-208ENST00000471861 KRTAP9-9Q9BYP9 154 aa5.88□□□□□ -1.47
CCDC78-208ENST00000471861 PSPHP1O15172 72 aa5.86□□□□□ -1.47
CCDC78-208ENST00000471861 KRTAP19-4Q3LI73 84 aa5.81□□□□□ -1.48
CCDC78-208ENST00000471861 KRTAP6-2Q3LI66 62 aa5.79□□□□□ -1.48
CCDC78-208ENST00000471861 KRTAP9-4Q9BYQ2 154 aa5.77□□□□□ -1.49
CCDC78-208ENST00000471861 LCE3CQ5T5A8 94 aa5.75□□□□□ -1.49
CCDC78-208ENST00000471861 K7ERS5 55 aa5.74□□□□□ -1.49
CCDC78-208ENST00000471861 PCP4P48539 62 aa5.73□□□□□ -1.49
CCDC78-208ENST00000471861 KRTAP25-1Q3LHN0 102 aa5.69□□□□□ -1.5
CCDC78-208ENST00000471861 RPS28P62857 69 aaKnown RBP5.68□□□□□ -1.5
CCDC78-208ENST00000471861 KRTAP15-1Q3LI76 137 aa5.67□□□□□ -1.5
CCDC78-208ENST00000471861 A6NED7 52 aa5.66□□□□□ -1.5
CCDC78-208ENST00000471861 KRTAP5-1Q6L8H4 278 aa5.66□□□□□ -1.5
CCDC78-208ENST00000471861 KRTAP9-6A8MVA2 160 aa5.55□□□□□ -1.52
CCDC78-208ENST00000471861 KRTAP23-1A1A580 65 aa5.47□□□□□ -1.53
CCDC78-208ENST00000471861 CDC42SE1Q9NRR8 79 aa5.47□□□□□ -1.53
CCDC78-208ENST00000471861 MT3P25713 68 aa5.4□□□□□ -1.54
CCDC78-208ENST00000471861 ROMO1P60602 79 aa5.39□□□□□ -1.55
CCDC78-208ENST00000471861 LCE1EQ5T753 118 aa5.11□□□□□ -1.59
CCDC78-208ENST00000471861 SVIPQ8NHG7 77 aa5.09□□□□□ -1.59
CCDC78-208ENST00000471861 BRK1Q8WUW1 75 aa5.01□□□□□ -1.61
CCDC78-208ENST00000471861 KRTAP4-2Q9BYR5 136 aa4.97□□□□□ -1.61
CCDC78-208ENST00000471861 LCE1BQ5T7P3 118 aa4.88□□□□□ -1.63
CCDC78-208ENST00000471861 LCE1CQ5T751 118 aa4.76□□□□□ -1.65
CCDC78-208ENST00000471861 KRTAP4-12Q9BQ66 201 aa4.71□□□□□ -1.66
CCDC78-208ENST00000471861 PMAIP1Q13794 54 aa4.7□□□□□ -1.66
CCDC78-208ENST00000471861 PRO0628Q9UI54 55 aa4.62□□□□□ -1.67
CCDC78-208ENST00000471861 PRAC1Q96KF2 57 aa4.52□□□□□ -1.69
CCDC78-208ENST00000471861 KRTAP5-11Q6L8G4 156 aa4.49□□□□□ -1.69
CCDC78-208ENST00000471861 LCE1FQ5T754 118 aa4.37□□□□□ -1.71
CCDC78-208ENST00000471861 PHGR1C9JFL3 82 aa4.29□□□□□ -1.72
CCDC78-208ENST00000471861 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.27□□□□□ -1.73
CCDC78-208ENST00000471861 KTN1-AS1Q86SY8 53 aa4.25□□□□□ -1.73
CCDC78-208ENST00000471861 LCE3DQ9BYE3 92 aa3.99□□□□□ -1.77
CCDC78-208ENST00000471861 KRTAP21-2Q3LI59 83 aa3.94□□□□□ -1.78
CCDC78-208ENST00000471861 LUZP6Q538Z0 58 aa3.78□□□□□ -1.8
CCDC78-208ENST00000471861 KRTAP4-4Q9BYR3 166 aa3.71□□□□□ -1.82
CCDC78-208ENST00000471861 MUC19Q7Z5P9 8384 aa3.71□□□□□ -1.82
CCDC78-208ENST00000471861 H3BS24 57 aa3.64□□□□□ -1.83
CCDC78-208ENST00000471861 LCE3EQ5T5B0 92 aa3.64□□□□□ -1.83
CCDC78-208ENST00000471861 NDUFAF8A1L188 74 aa3.39□□□□□ -1.87
CCDC78-208ENST00000471861 KRTAP21-1Q3LI58 79 aa3.24□□□□□ -1.89
CCDC78-208ENST00000471861 A0A0A0MQY5 61 aa3.13□□□□□ -1.91
CCDC78-208ENST00000471861 INE1O15225 51 aa2.81□□□□□ -1.96
CCDC78-208ENST00000471861 PRM1P04553 51 aa2.78□□□□□ -1.96
CCDC78-208ENST00000471861 MUC16Q8WXI7 14507 aa2.59□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 39.5 ms