RNA–Protein interactions for RNA: ENST00000471655.1

VPS8-221, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 434 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-221ENST00000471655 MT1MQ8N339 61 aa5.32□□□□□ -1.56
VPS8-221ENST00000471655 MT1LQ93083 61 aa5.32□□□□□ -1.56
VPS8-221ENST00000471655 PRR15LQ9BU68 103 aa5.32□□□□□ -1.56
VPS8-221ENST00000471655 KRTAP4-9Q9BYQ8 210 aa5.32□□□□□ -1.56
VPS8-221ENST00000471655 LCE1DQ5T752 114 aa5.3□□□□□ -1.56
VPS8-221ENST00000471655 LCE3AQ5TA76 89 aa5.3□□□□□ -1.56
VPS8-221ENST00000471655 LINC01558Q9Y6Z2 57 aa5.27□□□□□ -1.57
VPS8-221ENST00000471655 GPR98Q8WXG9 6306 aa5.22□□□□□ -1.57
VPS8-221ENST00000471655 KRTAP4-7Q9BYR0 210 aa5.22□□□□□ -1.57
VPS8-221ENST00000471655 UQCR11O14957 56 aa5.16□□□□□ -1.58
VPS8-221ENST00000471655 KRTAP4-3Q9BYR4 195 aa5.16□□□□□ -1.58
VPS8-221ENST00000471655 TMEM258P61165 79 aa5.15□□□□□ -1.59
VPS8-221ENST00000471655 KRTAP5-4Q6L8H1 288 aa5.14□□□□□ -1.59
VPS8-221ENST00000471655 MT4P47944 62 aa5.12□□□□□ -1.59
VPS8-221ENST00000471655 KRTAP12-3P60328 96 aa5.12□□□□□ -1.59
VPS8-221ENST00000471655 HMCN1Q96RW7 5635 aa5.11□□□□□ -1.59
VPS8-221ENST00000471655 KRTAP25-1Q3LHN0 102 aa5.02□□□□□ -1.61
VPS8-221ENST00000471655 MIR22HGQ0VDD5 57 aa5.01□□□□□ -1.61
VPS8-221ENST00000471655 KRTAP4-2Q9BYR5 136 aa4.99□□□□□ -1.61
VPS8-221ENST00000471655 KRTAP4-11Q9BYQ6 195 aa4.98□□□□□ -1.61
VPS8-221ENST00000471655 K7ERS5 55 aa4.94□□□□□ -1.62
VPS8-221ENST00000471655 AHNAK2Q8IVF2 5795 aa4.91□□□□□ -1.62
VPS8-221ENST00000471655 V9GYY9 64 aa4.91□□□□□ -1.62
VPS8-221ENST00000471655 KRTAP5-5Q701N2 237 aaPredicted RBP4.9□□□□□ -1.63
VPS8-221ENST00000471655 PSPHP1O15172 72 aa4.89□□□□□ -1.63
VPS8-221ENST00000471655 KRTAP5-10Q6L8G5 202 aa4.89□□□□□ -1.63
VPS8-221ENST00000471655 KRTAP23-1A1A580 65 aa4.87□□□□□ -1.63
VPS8-221ENST00000471655 Q1T7F1 81 aa4.87□□□□□ -1.63
VPS8-221ENST00000471655 SPRR5A0A1B0GTR4 108 aa4.83□□□□□ -1.64
VPS8-221ENST00000471655 KRTAP20-2Q3LI61 65 aa4.82□□□□□ -1.64
VPS8-221ENST00000471655 KRTAP12-4P60329 112 aa4.78□□□□□ -1.64
VPS8-221ENST00000471655 KRTAP15-1Q3LI76 137 aa4.77□□□□□ -1.65
VPS8-221ENST00000471655 KRTAP5-3Q6L8H2 238 aa4.76□□□□□ -1.65
VPS8-221ENST00000471655 KRTAP5-7Q6L8G8 165 aa4.72□□□□□ -1.65
VPS8-221ENST00000471655 A6NED7 52 aa4.71□□□□□ -1.66
VPS8-221ENST00000471655 LCE3CQ5T5A8 94 aa4.71□□□□□ -1.66
VPS8-221ENST00000471655 CDC42SE1Q9NRR8 79 aa4.66□□□□□ -1.66
VPS8-221ENST00000471655 SYNE1Q8NF91 8797 aaKnown RBP4.64□□□□□ -1.67
VPS8-221ENST00000471655 ROMO1P60602 79 aa4.59□□□□□ -1.67
VPS8-221ENST00000471655 RPS28P62857 69 aaKnown RBP4.56□□□□□ -1.68
VPS8-221ENST00000471655 MT1AP04731 61 aa4.54□□□□□ -1.68
VPS8-221ENST00000471655 PCP4P48539 62 aa4.51□□□□□ -1.69
VPS8-221ENST00000471655 KRTAP6-1Q3LI64 71 aa4.49□□□□□ -1.69
VPS8-221ENST00000471655 KRTAP5-2Q701N4 177 aa4.49□□□□□ -1.69
VPS8-221ENST00000471655 KRTAP9-6A8MVA2 160 aa4.43□□□□□ -1.7
VPS8-221ENST00000471655 SVIPQ8NHG7 77 aa4.41□□□□□ -1.7
VPS8-221ENST00000471655 KRTAP6-2Q3LI66 62 aa4.3□□□□□ -1.72
VPS8-221ENST00000471655 KRTAP5-8O75690 187 aa4.28□□□□□ -1.72
VPS8-221ENST00000471655 MT3P25713 68 aa4.16□□□□□ -1.74
VPS8-221ENST00000471655 OBSCNQ5VST9 7968 aa4.15□□□□□ -1.75
VPS8-221ENST00000471655 MUC5ACP98088 5654 aa4.06□□□□□ -1.76
VPS8-221ENST00000471655 MUC5BQ9HC84 5762 aaPredicted RBP4.06□□□□□ -1.76
VPS8-221ENST00000471655 AHNAKQ09666 5890 aaKnown RBP4.04□□□□□ -1.76
VPS8-221ENST00000471655 KRTAP5-1Q6L8H4 278 aa4.03□□□□□ -1.76
VPS8-221ENST00000471655 BRK1Q8WUW1 75 aa4.03□□□□□ -1.76
VPS8-221ENST00000471655 LCE1EQ5T753 118 aa3.87□□□□□ -1.79
VPS8-221ENST00000471655 PMAIP1Q13794 54 aa3.78□□□□□ -1.8
VPS8-221ENST00000471655 PRAC1Q96KF2 57 aa3.69□□□□□ -1.82
VPS8-221ENST00000471655 LCE1CQ5T751 118 aa3.58□□□□□ -1.84
VPS8-221ENST00000471655 LCE1BQ5T7P3 118 aa3.58□□□□□ -1.84
VPS8-221ENST00000471655 PRO0628Q9UI54 55 aa3.45□□□□□ -1.86
VPS8-221ENST00000471655 A0A0A0MQY5 61 aa3.41□□□□□ -1.86
VPS8-221ENST00000471655 LCE3DQ9BYE3 92 aa3.39□□□□□ -1.87
VPS8-221ENST00000471655 KRTAP5-11Q6L8G4 156 aa3.37□□□□□ -1.87
VPS8-221ENST00000471655 KTN1-AS1Q86SY8 53 aa3.31□□□□□ -1.88
VPS8-221ENST00000471655 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.29□□□□□ -1.88
VPS8-221ENST00000471655 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
VPS8-221ENST00000471655 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
VPS8-221ENST00000471655 LUZP6Q538Z0 58 aa3.08□□□□□ -1.92
VPS8-221ENST00000471655 KRTAP21-2Q3LI59 83 aa2.98□□□□□ -1.93
VPS8-221ENST00000471655 PHGR1C9JFL3 82 aa2.83□□□□□ -1.96
VPS8-221ENST00000471655 NDUFAF8A1L188 74 aa2.81□□□□□ -1.96
VPS8-221ENST00000471655 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
VPS8-221ENST00000471655 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
VPS8-221ENST00000471655 PRM1P04553 51 aa2.33□□□□□ -2.04
VPS8-221ENST00000471655 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
VPS8-221ENST00000471655 INE1O15225 51 aa1.98□□□□□ -2.09
VPS8-221ENST00000471655 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 162.1 ms