RNA–Protein interactions for RNA: ENST00000471494.5

RNF220-208, Transcript of ring finger protein 220, human

TSL 5

Gene RNF220, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF220-208	ENST00000471494	GPR98	Q8WXG9	6306 aa		8.14	□□□□□ -1.11
RNF220-208	ENST00000471494	LCE1D	Q5T752	114 aa		8.13	□□□□□ -1.11
RNF220-208	ENST00000471494	LCE4A	Q5TA78	99 aa		8.12	□□□□□ -1.11
RNF220-208	ENST00000471494	KRTAP4-3	Q9BYR4	195 aa		8.1	□□□□□ -1.11
RNF220-208	ENST00000471494	MT4	P47944	62 aa		8.05	□□□□□ -1.12
RNF220-208	ENST00000471494	KRTAP12-3	P60328	96 aa		8.05	□□□□□ -1.12
RNF220-208	ENST00000471494	MIR22HG	Q0VDD5	57 aa		7.99	□□□□□ -1.13
RNF220-208	ENST00000471494	HMCN1	Q96RW7	5635 aa		7.96	□□□□□ -1.13
RNF220-208	ENST00000471494	KRTAP5-4	Q6L8H1	288 aa		7.93	□□□□□ -1.14
RNF220-208	ENST00000471494	KRTAP25-1	Q3LHN0	102 aa		7.91	□□□□□ -1.14
RNF220-208	ENST00000471494		K7ERS5	55 aa		7.9	□□□□□ -1.14
RNF220-208	ENST00000471494	KRTAP4-7	Q9BYR0	210 aa		7.9	□□□□□ -1.14
RNF220-208	ENST00000471494		V9GYY9	64 aa		7.83	□□□□□ -1.16
RNF220-208	ENST00000471494	PSPHP1	O15172	72 aa		7.81	□□□□□ -1.16
RNF220-208	ENST00000471494	KRTAP4-6	Q9BYQ5	205 aa		7.78	□□□□□ -1.16
RNF220-208	ENST00000471494		Q1T7F1	81 aa		7.74	□□□□□ -1.17
RNF220-208	ENST00000471494	AHNAK2	Q8IVF2	5795 aa		7.69	□□□□□ -1.18
RNF220-208	ENST00000471494	KRTAP5-5	Q701N2	237 aa	Predicted RBP	7.61	□□□□□ -1.19
RNF220-208	ENST00000471494	KRTAP23-1	A1A580	65 aa		7.58	□□□□□ -1.2
RNF220-208	ENST00000471494	KRTAP19-4	Q3LI73	84 aa		7.57	□□□□□ -1.2
RNF220-208	ENST00000471494		A6NED7	52 aa		7.56	□□□□□ -1.2
RNF220-208	ENST00000471494	KRTAP5-10	Q6L8G5	202 aa		7.55	□□□□□ -1.2
RNF220-208	ENST00000471494	KRTAP20-2	Q3LI61	65 aa		7.5	□□□□□ -1.21
RNF220-208	ENST00000471494	KRTAP15-1	Q3LI76	137 aa		7.5	□□□□□ -1.21
RNF220-208	ENST00000471494	LOC100996750	A0A140TA64	210 aa		7.49	□□□□□ -1.21
RNF220-208	ENST00000471494	SPRR5	A0A1B0GTR4	108 aa		7.47	□□□□□ -1.21
RNF220-208	ENST00000471494	KRTAP12-4	P60329	112 aa		7.46	□□□□□ -1.22
RNF220-208	ENST00000471494	CDC42SE1	Q9NRR8	79 aa		7.45	□□□□□ -1.22
RNF220-208	ENST00000471494	LCE3C	Q5T5A8	94 aa		7.4	□□□□□ -1.22
RNF220-208	ENST00000471494	KRTAP5-3	Q6L8H2	238 aa		7.39	□□□□□ -1.23
RNF220-208	ENST00000471494	ROMO1	P60602	79 aa		7.31	□□□□□ -1.24
RNF220-208	ENST00000471494	SYNE1	Q8NF91	8797 aa	Known RBP	7.29	□□□□□ -1.24
RNF220-208	ENST00000471494	KRTAP5-7	Q6L8G8	165 aa		7.27	□□□□□ -1.25
RNF220-208	ENST00000471494	RPS28	P62857	69 aa	Known RBP	7.24	□□□□□ -1.25
RNF220-208	ENST00000471494	MT1A	P04731	61 aa		7.1	□□□□□ -1.27
RNF220-208	ENST00000471494	PCP4	P48539	62 aa		7.05	□□□□□ -1.28
RNF220-208	ENST00000471494	KRTAP6-1	Q3LI64	71 aa		7.04	□□□□□ -1.28
RNF220-208	ENST00000471494	KRTAP9-6	A8MVA2	160 aa		6.95	□□□□□ -1.3
RNF220-208	ENST00000471494	KRTAP5-2	Q701N4	177 aa		6.94	□□□□□ -1.3
RNF220-208	ENST00000471494	KRTAP4-11	Q9BYQ6	195 aa		6.86	□□□□□ -1.31
RNF220-208	ENST00000471494	KRTAP9-4	Q9BYQ2	154 aa		6.84	□□□□□ -1.31
RNF220-208	ENST00000471494	KRTAP6-2	Q3LI66	62 aa		6.75	□□□□□ -1.33
RNF220-208	ENST00000471494	KRTAP5-8	O75690	187 aa		6.62	□□□□□ -1.35
RNF220-208	ENST00000471494	OBSCN	Q5VST9	7968 aa		6.52	□□□□□ -1.37
RNF220-208	ENST00000471494	MT3	P25713	68 aa		6.5	□□□□□ -1.37
RNF220-208	ENST00000471494	BRK1	Q8WUW1	75 aa		6.39	□□□□□ -1.39
RNF220-208	ENST00000471494	MUC5AC	P98088	5654 aa		6.35	□□□□□ -1.39
RNF220-208	ENST00000471494	AHNAK	Q09666	5890 aa	Known RBP	6.33	□□□□□ -1.4
RNF220-208	ENST00000471494	KRTAP9-9	Q9BYP9	154 aa		6.31	□□□□□ -1.4
RNF220-208	ENST00000471494	MUC5B	Q9HC84	5762 aa	Predicted RBP	6.3	□□□□□ -1.4
RNF220-208	ENST00000471494	KRTAP5-1	Q6L8H4	278 aa		6.22	□□□□□ -1.41
RNF220-208	ENST00000471494	PMAIP1	Q13794	54 aa		5.98	□□□□□ -1.45
RNF220-208	ENST00000471494	LCE1E	Q5T753	118 aa		5.96	□□□□□ -1.46
RNF220-208	ENST00000471494	PRAC1	Q96KF2	57 aa		5.79	□□□□□ -1.48
RNF220-208	ENST00000471494	LCE1B	Q5T7P3	118 aa		5.64	□□□□□ -1.51
RNF220-208	ENST00000471494	KRTAP4-2	Q9BYR5	136 aa		5.63	□□□□□ -1.51
RNF220-208	ENST00000471494	LCE1C	Q5T751	118 aa		5.53	□□□□□ -1.52
RNF220-208	ENST00000471494	PRO0628	Q9UI54	55 aa		5.4	□□□□□ -1.54
RNF220-208	ENST00000471494	LCE3D	Q9BYE3	92 aa		5.33	□□□□□ -1.56
RNF220-208	ENST00000471494	KTN1-AS1	Q86SY8	53 aa		5.22	□□□□□ -1.57
RNF220-208	ENST00000471494	KRTAP4-12	Q9BQ66	201 aa		5.13	□□□□□ -1.59
RNF220-208	ENST00000471494	SVIP	Q8NHG7	77 aa		5.09	□□□□□ -1.59
RNF220-208	ENST00000471494	KRTAP5-11	Q6L8G4	156 aa		5.03	□□□□□ -1.6
RNF220-208	ENST00000471494	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	5.02	□□□□□ -1.61
RNF220-208	ENST00000471494	LCE3E	Q5T5B0	92 aa		5	□□□□□ -1.61
RNF220-208	ENST00000471494	LUZP6	Q538Z0	58 aa		4.95	□□□□□ -1.62
RNF220-208	ENST00000471494	LCE1F	Q5T754	118 aa		4.89	□□□□□ -1.63
RNF220-208	ENST00000471494	KRTAP21-2	Q3LI59	83 aa		4.62	□□□□□ -1.67
RNF220-208	ENST00000471494	PHGR1	C9JFL3	82 aa		4.42	□□□□□ -1.7
RNF220-208	ENST00000471494	KRTAP4-4	Q9BYR3	166 aa		4.26	□□□□□ -1.73
RNF220-208	ENST00000471494	MUC19	Q7Z5P9	8384 aa		4.02	□□□□□ -1.77
RNF220-208	ENST00000471494	NDUFAF8	A1L188	74 aa		3.79	□□□□□ -1.8
RNF220-208	ENST00000471494	PRM1	P04553	51 aa		3.73	□□□□□ -1.81
RNF220-208	ENST00000471494	KRTAP21-1	Q3LI58	79 aa		3.36	□□□□□ -1.87
RNF220-208	ENST00000471494	INE1	O15225	51 aa		3.01	□□□□□ -1.93
RNF220-208	ENST00000471494		A0A0A0MQY5	61 aa		2.89	□□□□□ -1.95
RNF220-208	ENST00000471494	MUC16	Q8WXI7	14507 aa		2.83	□□□□□ -1.96
RNF220-208	ENST00000471494		H3BS24	57 aa		2.51	□□□□□ -2.01

Retrieved 78 of 20,778 RNA–protein pairs in 90.3 ms