RNA–Protein interactions for RNA: ENST00000471459.1

HOXB3-206, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-206ENST00000471459 K7ERS5 55 aa5.22□□□□□ -1.57
HOXB3-206ENST00000471459 MIR22HGQ0VDD5 57 aa5.21□□□□□ -1.58
HOXB3-206ENST00000471459 LCE4AQ5TA78 99 aa5.18□□□□□ -1.58
HOXB3-206ENST00000471459 KRTAP12-3P60328 96 aa5.17□□□□□ -1.58
HOXB3-206ENST00000471459 V9GYY9 64 aa5.17□□□□□ -1.58
HOXB3-206ENST00000471459 KRTAP25-1Q3LHN0 102 aa5.13□□□□□ -1.59
HOXB3-206ENST00000471459 LCE1DQ5T752 114 aa5.13□□□□□ -1.59
HOXB3-206ENST00000471459 KRTAP4-3Q9BYR4 195 aa5.11□□□□□ -1.59
HOXB3-206ENST00000471459 MT4P47944 62 aa5.1□□□□□ -1.59
HOXB3-206ENST00000471459 PSPHP1O15172 72 aa5.08□□□□□ -1.6
HOXB3-206ENST00000471459 GPR98Q8WXG9 6306 aa5.08□□□□□ -1.6
HOXB3-206ENST00000471459 Q1T7F1 81 aa5.05□□□□□ -1.6
HOXB3-206ENST00000471459 KRTAP5-4Q6L8H1 288 aa5.01□□□□□ -1.61
HOXB3-206ENST00000471459 KRTAP4-7Q9BYR0 210 aa5□□□□□ -1.61
HOXB3-206ENST00000471459 KRTAP19-4Q3LI73 84 aa4.96□□□□□ -1.62
HOXB3-206ENST00000471459 HMCN1Q96RW7 5635 aa4.96□□□□□ -1.62
HOXB3-206ENST00000471459 A6NED7 52 aa4.95□□□□□ -1.62
HOXB3-206ENST00000471459 KRTAP23-1A1A580 65 aa4.93□□□□□ -1.62
HOXB3-206ENST00000471459 KRTAP4-6Q9BYQ5 205 aa4.92□□□□□ -1.62
HOXB3-206ENST00000471459 CDC42SE1Q9NRR8 79 aa4.87□□□□□ -1.63
HOXB3-206ENST00000471459 KRTAP15-1Q3LI76 137 aa4.84□□□□□ -1.63
HOXB3-206ENST00000471459 KRTAP12-4P60329 112 aa4.81□□□□□ -1.64
HOXB3-206ENST00000471459 RPS28P62857 69 aaKnown RBP4.79□□□□□ -1.64
HOXB3-206ENST00000471459 KRTAP5-5Q701N2 237 aaPredicted RBP4.79□□□□□ -1.64
HOXB3-206ENST00000471459 ROMO1P60602 79 aa4.77□□□□□ -1.65
HOXB3-206ENST00000471459 SPRR5A0A1B0GTR4 108 aa4.76□□□□□ -1.65
HOXB3-206ENST00000471459 LCE3CQ5T5A8 94 aa4.76□□□□□ -1.65
HOXB3-206ENST00000471459 KRTAP20-2Q3LI61 65 aa4.74□□□□□ -1.65
HOXB3-206ENST00000471459 KRTAP5-10Q6L8G5 202 aa4.74□□□□□ -1.65
HOXB3-206ENST00000471459 AHNAK2Q8IVF2 5795 aa4.74□□□□□ -1.65
HOXB3-206ENST00000471459 LOC100996750A0A140TA64 210 aa4.73□□□□□ -1.65
HOXB3-206ENST00000471459 KRTAP5-3Q6L8H2 238 aa4.66□□□□□ -1.66
HOXB3-206ENST00000471459 PCP4P48539 62 aa4.65□□□□□ -1.67
HOXB3-206ENST00000471459 KRTAP5-7Q6L8G8 165 aa4.58□□□□□ -1.68
HOXB3-206ENST00000471459 SYNE1Q8NF91 8797 aaKnown RBP4.57□□□□□ -1.68
HOXB3-206ENST00000471459 MT1AP04731 61 aa4.51□□□□□ -1.69
HOXB3-206ENST00000471459 KRTAP6-1Q3LI64 71 aa4.46□□□□□ -1.7
HOXB3-206ENST00000471459 KRTAP9-6A8MVA2 160 aa4.39□□□□□ -1.71
HOXB3-206ENST00000471459 KRTAP9-4Q9BYQ2 154 aa4.38□□□□□ -1.71
HOXB3-206ENST00000471459 KRTAP5-2Q701N4 177 aa4.37□□□□□ -1.71
HOXB3-206ENST00000471459 KRTAP4-11Q9BYQ6 195 aa4.36□□□□□ -1.71
HOXB3-206ENST00000471459 KRTAP6-2Q3LI66 62 aa4.29□□□□□ -1.72
HOXB3-206ENST00000471459 BRK1Q8WUW1 75 aa4.2□□□□□ -1.74
HOXB3-206ENST00000471459 MT3P25713 68 aa4.19□□□□□ -1.74
HOXB3-206ENST00000471459 KRTAP5-8O75690 187 aa4.17□□□□□ -1.74
HOXB3-206ENST00000471459 OBSCNQ5VST9 7968 aa4.11□□□□□ -1.75
HOXB3-206ENST00000471459 KRTAP9-9Q9BYP9 154 aa4.05□□□□□ -1.76
HOXB3-206ENST00000471459 PMAIP1Q13794 54 aa3.98□□□□□ -1.77
HOXB3-206ENST00000471459 MUC5ACP98088 5654 aa3.95□□□□□ -1.78
HOXB3-206ENST00000471459 KRTAP5-1Q6L8H4 278 aa3.93□□□□□ -1.78
HOXB3-206ENST00000471459 AHNAKQ09666 5890 aaKnown RBP3.92□□□□□ -1.78
HOXB3-206ENST00000471459 MUC5BQ9HC84 5762 aaPredicted RBP3.92□□□□□ -1.78
HOXB3-206ENST00000471459 LCE1EQ5T753 118 aa3.83□□□□□ -1.8
HOXB3-206ENST00000471459 PRAC1Q96KF2 57 aa3.75□□□□□ -1.81
HOXB3-206ENST00000471459 KRTAP4-12Q9BQ66 201 aa3.67□□□□□ -1.82
HOXB3-206ENST00000471459 PRO0628Q9UI54 55 aa3.66□□□□□ -1.82
HOXB3-206ENST00000471459 LCE1BQ5T7P3 118 aa3.62□□□□□ -1.83
HOXB3-206ENST00000471459 LCE1CQ5T751 118 aa3.54□□□□□ -1.84
HOXB3-206ENST00000471459 KRTAP4-2Q9BYR5 136 aa3.54□□□□□ -1.84
HOXB3-206ENST00000471459 LCE3DQ9BYE3 92 aa3.46□□□□□ -1.86
HOXB3-206ENST00000471459 KTN1-AS1Q86SY8 53 aa3.45□□□□□ -1.86
HOXB3-206ENST00000471459 SVIPQ8NHG7 77 aa3.39□□□□□ -1.87
HOXB3-206ENST00000471459 LUZP6Q538Z0 58 aa3.34□□□□□ -1.87
HOXB3-206ENST00000471459 LCE3EQ5T5B0 92 aa3.25□□□□□ -1.89
HOXB3-206ENST00000471459 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
HOXB3-206ENST00000471459 H3BS24 57 aa3.18□□□□□ -1.9
HOXB3-206ENST00000471459 KRTAP5-11Q6L8G4 156 aa3.18□□□□□ -1.9
HOXB3-206ENST00000471459 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
HOXB3-206ENST00000471459 KRTAP21-2Q3LI59 83 aa2.92□□□□□ -1.94
HOXB3-206ENST00000471459 PHGR1C9JFL3 82 aa2.81□□□□□ -1.96
HOXB3-206ENST00000471459 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
HOXB3-206ENST00000471459 NDUFAF8A1L188 74 aa2.58□□□□□ -2
HOXB3-206ENST00000471459 MUC19Q7Z5P9 8384 aa2.53□□□□□ -2
HOXB3-206ENST00000471459 PRM1P04553 51 aa2.4□□□□□ -2.03
HOXB3-206ENST00000471459 A0A0A0MQY5 61 aa2.17□□□□□ -2.06
HOXB3-206ENST00000471459 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.07
HOXB3-206ENST00000471459 INE1O15225 51 aa2.13□□□□□ -2.07
HOXB3-206ENST00000471459 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 97 ms