RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 TMEM258P61165 79 aa7.29□□□□□ -1.24
SREBF1-210ENST00000471445 LCE4AQ5TA78 99 aa7.28□□□□□ -1.24
SREBF1-210ENST00000471445 KRTAP4-3Q9BYR4 195 aa7.26□□□□□ -1.25
SREBF1-210ENST00000471445 HMCN1Q96RW7 5635 aa7.24□□□□□ -1.25
SREBF1-210ENST00000471445 UQCR11O14957 56 aa7.23□□□□□ -1.25
SREBF1-210ENST00000471445 MT4P47944 62 aa7.17□□□□□ -1.26
SREBF1-210ENST00000471445 KRTAP12-3P60328 96 aa7.17□□□□□ -1.26
SREBF1-210ENST00000471445 KRTAP5-4Q6L8H1 288 aa7.16□□□□□ -1.26
SREBF1-210ENST00000471445 AHNAK2Q8IVF2 5795 aa7.14□□□□□ -1.27
SREBF1-210ENST00000471445 KRTAP5-10Q6L8G5 202 aa7.09□□□□□ -1.27
SREBF1-210ENST00000471445 KRTAP4-7Q9BYR0 210 aa7.08□□□□□ -1.28
SREBF1-210ENST00000471445 MIR22HGQ0VDD5 57 aa7.06□□□□□ -1.28
SREBF1-210ENST00000471445 KRTAP25-1Q3LHN0 102 aa7.02□□□□□ -1.29
SREBF1-210ENST00000471445 KRTAP4-6Q9BYQ5 205 aa6.98□□□□□ -1.29
SREBF1-210ENST00000471445 K7ERS5 55 aa6.92□□□□□ -1.3
SREBF1-210ENST00000471445 KRTAP5-7Q6L8G8 165 aa6.91□□□□□ -1.3
SREBF1-210ENST00000471445 PCP4P48539 62 aa6.9□□□□□ -1.3
SREBF1-210ENST00000471445 V9GYY9 64 aa6.9□□□□□ -1.3
SREBF1-210ENST00000471445 PSPHP1O15172 72 aa6.88□□□□□ -1.31
SREBF1-210ENST00000471445 KRTAP5-5Q701N2 237 aaPredicted RBP6.86□□□□□ -1.31
SREBF1-210ENST00000471445 Q1T7F1 81 aa6.85□□□□□ -1.31
SREBF1-210ENST00000471445 KRTAP5-3Q6L8H2 238 aa6.81□□□□□ -1.32
SREBF1-210ENST00000471445 KRTAP23-1A1A580 65 aa6.76□□□□□ -1.33
SREBF1-210ENST00000471445 KRTAP19-4Q3LI73 84 aa6.76□□□□□ -1.33
SREBF1-210ENST00000471445 KRTAP20-2Q3LI61 65 aa6.75□□□□□ -1.33
SREBF1-210ENST00000471445 LOC100996750A0A140TA64 210 aa6.71□□□□□ -1.34
SREBF1-210ENST00000471445 SPRR5A0A1B0GTR4 108 aa6.7□□□□□ -1.34
SREBF1-210ENST00000471445 KRTAP15-1Q3LI76 137 aa6.67□□□□□ -1.34
SREBF1-210ENST00000471445 A6NED7 52 aa6.64□□□□□ -1.35
SREBF1-210ENST00000471445 KRTAP12-4P60329 112 aa6.63□□□□□ -1.35
SREBF1-210ENST00000471445 SYNE1Q8NF91 8797 aaKnown RBP6.6□□□□□ -1.35
SREBF1-210ENST00000471445 LCE3CQ5T5A8 94 aa6.58□□□□□ -1.36
SREBF1-210ENST00000471445 RPS28P62857 69 aaKnown RBP6.57□□□□□ -1.36
SREBF1-210ENST00000471445 CDC42SE1Q9NRR8 79 aa6.57□□□□□ -1.36
SREBF1-210ENST00000471445 ROMO1P60602 79 aa6.46□□□□□ -1.38
SREBF1-210ENST00000471445 MT1AP04731 61 aa6.37□□□□□ -1.39
SREBF1-210ENST00000471445 KRTAP6-1Q3LI64 71 aa6.31□□□□□ -1.4
SREBF1-210ENST00000471445 KRTAP5-2Q701N4 177 aa6.28□□□□□ -1.4
SREBF1-210ENST00000471445 KRTAP9-6A8MVA2 160 aa6.24□□□□□ -1.41
SREBF1-210ENST00000471445 KRTAP4-11Q9BYQ6 195 aa6.18□□□□□ -1.42
SREBF1-210ENST00000471445 KRTAP9-4Q9BYQ2 154 aa6.12□□□□□ -1.43
SREBF1-210ENST00000471445 AHNAKQ09666 5890 aaKnown RBP6.04□□□□□ -1.44
SREBF1-210ENST00000471445 KRTAP6-2Q3LI66 62 aa6.03□□□□□ -1.44
SREBF1-210ENST00000471445 MUC5ACP98088 5654 aa6.01□□□□□ -1.45
SREBF1-210ENST00000471445 MUC5BQ9HC84 5762 aaPredicted RBP6□□□□□ -1.45
SREBF1-210ENST00000471445 KRTAP5-8O75690 187 aa5.97□□□□□ -1.45
SREBF1-210ENST00000471445 BRK1Q8WUW1 75 aa5.89□□□□□ -1.47
SREBF1-210ENST00000471445 OBSCNQ5VST9 7968 aa5.79□□□□□ -1.48
SREBF1-210ENST00000471445 MT3P25713 68 aa5.79□□□□□ -1.48
SREBF1-210ENST00000471445 KRTAP9-9Q9BYP9 154 aa5.78□□□□□ -1.48
SREBF1-210ENST00000471445 KRTAP5-1Q6L8H4 278 aa5.62□□□□□ -1.51
SREBF1-210ENST00000471445 PRO0628Q9UI54 55 aa5.6□□□□□ -1.51
SREBF1-210ENST00000471445 PMAIP1Q13794 54 aa5.53□□□□□ -1.52
SREBF1-210ENST00000471445 SVIPQ8NHG7 77 aa5.51□□□□□ -1.53
SREBF1-210ENST00000471445 LCE1EQ5T753 118 aa5.35□□□□□ -1.55
SREBF1-210ENST00000471445 PRAC1Q96KF2 57 aa5.29□□□□□ -1.56
SREBF1-210ENST00000471445 KTN1-AS1Q86SY8 53 aa5.17□□□□□ -1.58
SREBF1-210ENST00000471445 KRTAP4-2Q9BYR5 136 aa5.08□□□□□ -1.6
SREBF1-210ENST00000471445 LCE1BQ5T7P3 118 aa5.01□□□□□ -1.61
SREBF1-210ENST00000471445 LCE1CQ5T751 118 aa4.96□□□□□ -1.62
SREBF1-210ENST00000471445 LCE3DQ9BYE3 92 aa4.72□□□□□ -1.65
SREBF1-210ENST00000471445 KRTAP4-12Q9BQ66 201 aa4.57□□□□□ -1.68
SREBF1-210ENST00000471445 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.54□□□□□ -1.68
SREBF1-210ENST00000471445 KRTAP5-11Q6L8G4 156 aa4.53□□□□□ -1.68
SREBF1-210ENST00000471445 LUZP6Q538Z0 58 aa4.44□□□□□ -1.7
SREBF1-210ENST00000471445 LCE3EQ5T5B0 92 aa4.44□□□□□ -1.7
SREBF1-210ENST00000471445 LCE1FQ5T754 118 aa4.4□□□□□ -1.71
SREBF1-210ENST00000471445 KRTAP21-2Q3LI59 83 aa4.17□□□□□ -1.74
SREBF1-210ENST00000471445 PHGR1C9JFL3 82 aa4.15□□□□□ -1.75
SREBF1-210ENST00000471445 NDUFAF8A1L188 74 aa4.03□□□□□ -1.76
SREBF1-210ENST00000471445 H3BS24 57 aa3.84□□□□□ -1.79
SREBF1-210ENST00000471445 KRTAP4-4Q9BYR3 166 aa3.79□□□□□ -1.8
SREBF1-210ENST00000471445 A0A0A0MQY5 61 aa3.7□□□□□ -1.82
SREBF1-210ENST00000471445 MUC19Q7Z5P9 8384 aa3.59□□□□□ -1.84
SREBF1-210ENST00000471445 INE1O15225 51 aa3.41□□□□□ -1.86
SREBF1-210ENST00000471445 PRM1P04553 51 aa3.3□□□□□ -1.88
SREBF1-210ENST00000471445 KRTAP21-1Q3LI58 79 aa3.2□□□□□ -1.9
SREBF1-210ENST00000471445 MUC16Q8WXI7 14507 aa2.58□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 11.5 ms