RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 PLAC4Q8WY50 150 aa2.65□□□□□ -1.99
SMNDC1-204ENST00000471297 FAT4Q6V0I7 4981 aa2.64□□□□□ -1.99
SMNDC1-204ENST00000471297 KRTAP19-8Q3LI54 63 aa2.64□□□□□ -1.99
SMNDC1-204ENST00000471297 ROMO1P60602 79 aa2.62□□□□□ -1.99
SMNDC1-204ENST00000471297 CAMK2N1Q7Z7J9 78 aa2.62□□□□□ -1.99
SMNDC1-204ENST00000471297 KTN1-AS1Q86SY8 53 aa2.61□□□□□ -1.99
SMNDC1-204ENST00000471297 MT1BP07438 61 aa2.58□□□□□ -2
SMNDC1-204ENST00000471297 C10orf95Q9H7T3 257 aa2.55□□□□□ -2
SMNDC1-204ENST00000471297 OBSCNQ5VST9 7968 aa2.54□□□□□ -2
SMNDC1-204ENST00000471297 KRTAP25-1Q3LHN0 102 aa2.53□□□□□ -2
SMNDC1-204ENST00000471297 TNP1P09430 55 aa2.52□□□□□ -2.01
SMNDC1-204ENST00000471297 PRO2289Q9P1D8 64 aa2.52□□□□□ -2.01
SMNDC1-204ENST00000471297 MT1XP80297 61 aa2.49□□□□□ -2.01
SMNDC1-204ENST00000471297 LCE3AQ5TA76 89 aa2.49□□□□□ -2.01
SMNDC1-204ENST00000471297 PP632Q6XCG6 107 aa2.47□□□□□ -2.01
SMNDC1-204ENST00000471297 KRTAP5-2Q701N4 177 aa2.45□□□□□ -2.02
SMNDC1-204ENST00000471297 KRTAP19-6Q3LI70 58 aa2.43□□□□□ -2.02
SMNDC1-204ENST00000471297 KRTAP4-3Q9BYR4 195 aa2.36□□□□□ -2.03
SMNDC1-204ENST00000471297 KRTAP8-1Q8IUC2 63 aa2.34□□□□□ -2.03
SMNDC1-204ENST00000471297 USH2AO75445 5202 aa2.33□□□□□ -2.04
SMNDC1-204ENST00000471297 LCE3DQ9BYE3 92 aa2.31□□□□□ -2.04
SMNDC1-204ENST00000471297 CRCT1Q9UGL9 99 aa2.3□□□□□ -2.04
SMNDC1-204ENST00000471297 KRTAP12-3P60328 96 aa2.29□□□□□ -2.04
SMNDC1-204ENST00000471297 KRTAP5-5Q701N2 237 aaPredicted RBP2.28□□□□□ -2.04
SMNDC1-204ENST00000471297 KRTAP19-5Q3LI72 72 aa2.26□□□□□ -2.05
SMNDC1-204ENST00000471297 SSPOA2VEC9 5147 aa2.25□□□□□ -2.05
SMNDC1-204ENST00000471297 SPRR5A0A1B0GTR4 108 aa2.22□□□□□ -2.05
SMNDC1-204ENST00000471297 KRTAP19-7Q3SYF9 63 aa2.22□□□□□ -2.05
SMNDC1-204ENST00000471297 LUZP6Q538Z0 58 aa2.2□□□□□ -2.06
SMNDC1-204ENST00000471297 MT1EP04732 61 aa2.19□□□□□ -2.06
SMNDC1-204ENST00000471297 FSIP2Q5CZC0 6907 aa2.18□□□□□ -2.06
SMNDC1-204ENST00000471297 FCGBPQ9Y6R7 5405 aaPredicted RBP2.18□□□□□ -2.06
SMNDC1-204ENST00000471297 LCE1CQ5T751 118 aa2.15□□□□□ -2.07
SMNDC1-204ENST00000471297 LCE1BQ5T7P3 118 aa2.15□□□□□ -2.07
SMNDC1-204ENST00000471297 MT1LQ93083 61 aa2.15□□□□□ -2.07
SMNDC1-204ENST00000471297 SPRR2FQ96RM1 72 aa2.14□□□□□ -2.07
SMNDC1-204ENST00000471297 MT1GP13640 62 aa2.12□□□□□ -2.07
SMNDC1-204ENST00000471297 KRTAP19-3Q7Z4W3 81 aa2.12□□□□□ -2.07
SMNDC1-204ENST00000471297 KRTAP6-3Q3LI67 103 aa2.11□□□□□ -2.07
SMNDC1-204ENST00000471297 KRTAP5-8O75690 187 aa2.09□□□□□ -2.07
SMNDC1-204ENST00000471297 KMT2DO14686 5537 aa2.06□□□□□ -2.08
SMNDC1-204ENST00000471297 MT1MQ8N339 61 aa2.06□□□□□ -2.08
SMNDC1-204ENST00000471297 SPRR2EP22531 72 aa2.04□□□□□ -2.08
SMNDC1-204ENST00000471297 SPRR2BP35325 72 aa2.04□□□□□ -2.08
SMNDC1-204ENST00000471297 SPRR2AP35326 72 aa2.04□□□□□ -2.08
SMNDC1-204ENST00000471297 MACF1Q9UPN3 7388 aaKnown RBP2.02□□□□□ -2.09
SMNDC1-204ENST00000471297 SPRR2DP22532 72 aa1.96□□□□□ -2.1
SMNDC1-204ENST00000471297 SYNE2Q8WXH0 6885 aaKnown RBP1.96□□□□□ -2.1
SMNDC1-204ENST00000471297 MUC12Q9UKN1 5478 aa1.91□□□□□ -2.1
SMNDC1-204ENST00000471297 KRTAP2-3P0C7H8 128 aa1.87□□□□□ -2.11
SMNDC1-204ENST00000471297 KRTAP2-4Q9BYR9 128 aa1.87□□□□□ -2.11
SMNDC1-204ENST00000471297 KRTAP2-1Q9BYU5 128 aa1.87□□□□□ -2.11
SMNDC1-204ENST00000471297 MT1AP04731 61 aa1.85□□□□□ -2.11
SMNDC1-204ENST00000471297 MDN1Q9NU22 5596 aa1.83□□□□□ -2.12
SMNDC1-204ENST00000471297 KRTAP20-1Q3LI63 56 aa1.8□□□□□ -2.12
SMNDC1-204ENST00000471297 KRTAP6-1Q3LI64 71 aa1.8□□□□□ -2.12
SMNDC1-204ENST00000471297 NEBP20929 6669 aa1.8□□□□□ -2.12
SMNDC1-204ENST00000471297 KRTAP5-7Q6L8G8 165 aa1.78□□□□□ -2.12
SMNDC1-204ENST00000471297 DSTQ03001 7570 aaKnown RBP1.77□□□□□ -2.13
SMNDC1-204ENST00000471297 KRTAP12-4P60329 112 aa1.76□□□□□ -2.13
SMNDC1-204ENST00000471297 INE1O15225 51 aa1.72□□□□□ -2.13
SMNDC1-204ENST00000471297 SYNE1Q8NF91 8797 aaKnown RBP1.69□□□□□ -2.14
SMNDC1-204ENST00000471297 MUC19Q7Z5P9 8384 aa1.69□□□□□ -2.14
SMNDC1-204ENST00000471297 HMCN1Q96RW7 5635 aa1.68□□□□□ -2.14
SMNDC1-204ENST00000471297 MT4P47944 62 aa1.68□□□□□ -2.14
SMNDC1-204ENST00000471297 GPR98Q8WXG9 6306 aa1.68□□□□□ -2.14
SMNDC1-204ENST00000471297 KRTAP20-2Q3LI61 65 aa1.66□□□□□ -2.14
SMNDC1-204ENST00000471297 KRTAP6-2Q3LI66 62 aa1.65□□□□□ -2.15
SMNDC1-204ENST00000471297 KRTAP21-2Q3LI59 83 aa1.52□□□□□ -2.17
SMNDC1-204ENST00000471297 AHNAK2Q8IVF2 5795 aa1.42□□□□□ -2.18
SMNDC1-204ENST00000471297 KRTAP5-10Q6L8G5 202 aa1.42□□□□□ -2.18
SMNDC1-204ENST00000471297 PRM1P04553 51 aa1.35□□□□□ -2.19
SMNDC1-204ENST00000471297 AHNAKQ09666 5890 aaKnown RBP1.3□□□□□ -2.2
SMNDC1-204ENST00000471297 MUC5BQ9HC84 5762 aaPredicted RBP1.23□□□□□ -2.21
SMNDC1-204ENST00000471297 MUC5ACP98088 5654 aa1.21□□□□□ -2.22
SMNDC1-204ENST00000471297 PHGR1C9JFL3 82 aa1.01□□□□□ -2.25
SMNDC1-204ENST00000471297 KRTAP21-1Q3LI58 79 aa0.84□□□□□ -2.27
SMNDC1-204ENST00000471297 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 75.5 ms